Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-613B23.3 Gene 0 1.79 1.72 2.02 2.38 0.17 1.55 2.32 1.34 0.84 1.67 0.50 2.61 4.73 2.10 1.33 1.53 2.57 0.72 1.45 3.18 4.86 1.62 1.34 2 445452 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 3 438017 Transcript 0 1.16 1.29 0.56 3.37 0.00 1.53 0.26 2.02 1.00 0.52 0.73 5.83 9.42 5.56 0.02 1.08 2.59 0.85 0.00 3.35 2.73 0.46 0.00 4 434363 Transcript 0 1.60 5.53 2.61 6.52 1.84 3.07 5.88 4.02 2.33 1.71 2.85 2.34 5.61 1.12 1.62 0.00 3.73 1.18 0.00 11.37 2.17 0.00 0.00 5 ER1a ExonRegion 0 0.00 1.65 1.05 0.00 0.00 2.91 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.38 0.00 0.00 1.78 1.69 1.21 6 E1_Ab KnownBoundary 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 4.18 7 ER1b ExonRegion 0 1.30 0.31 3.10 1.24 0.00 1.14 1.83 0.40 0.28 2.00 0.00 0.00 0.00 0.38 0.00 0.46 2.03 0.77 1.96 0.98 8.12 2.56 2.03 8 E1a_E2a KnownJunction 0 0.00 0.00 1.54 1.33 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 18.97 27.55 7.28 31.96 45.31 27.03 50.64 17.97 15.77 9.53 22.72 29.98 52.60 30.49 8.47 20.13 18.41 16.85 16.50 27.55 8.78 32.79 19.89 11 Ix_AR1 ActiveIntronRegion 0 19.12 27.77 7.33 32.22 45.67 27.25 51.04 18.11 15.89 9.61 22.90 30.22 53.01 30.72 8.53 20.29 18.54 16.99 16.63 27.77 8.81 33.05 20.05 12 E2_Aa NovelBoundary 0 149.58 83.01 38.14 109.64 101.78 91.99 219.40 70.28 105.15 47.25 228.53 755.80 485.52 317.97 62.06 250.87 264.61 136.13 51.01 237.96 76.85 105.93 147.85 13 ER2a ExonRegion 0 0.22 1.15 2.25 7.20 0.36 4.21 1.74 2.99 1.71 1.80 0.35 1.16 0.49 0.05 0.09 0.00 4.29 1.02 0.00 1.78 2.80 0.09 0.00 14 E2_Da KnownBoundary 0 172.55 157.14 46.10 130.39 152.89 109.54 262.28 113.04 115.74 95.04 304.39 621.95 488.28 377.48 80.72 287.45 454.42 130.74 144.29 337.87 173.72 223.99 187.63 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 6.79 0.00 5.79 0.00 4.19 1.59 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 2.47 0.00 0.00 16 ER2b ExonRegion 0 1.60 5.53 2.61 6.52 1.84 3.07 5.88 4.02 2.33 1.71 2.85 2.34 5.61 1.12 1.62 0.00 3.73 1.18 0.00 11.37 2.17 0.00 0.00 17 E2_Db NovelBoundary 0 9.85 16.77 1.63 9.39 8.23 0.00 21.95 1.89 3.41 1.02 2.00 0.00 19.97 0.00 4.45 0.00 0.00 4.06 0.00 11.70 0.00 0.00 4.27 18 Ix Intron 1 4.56 13.41 3.47 10.70 7.56 9.95 41.91 5.34 6.85 3.85 37.89 127.40 134.61 70.27 5.93 40.71 45.31 9.32 8.59 62.97 10.06 24.74 17.30 19 Ix_AR4 ActiveIntronRegion 0 7.19 20.82 4.86 13.38 10.08 13.08 51.39 7.87 9.59 5.38 48.92 161.57 170.66 79.89 9.07 51.80 51.85 11.76 11.28 77.48 10.89 34.24 23.60 20 Ix_SR3 SilentIntronRegion 0 9.24 7.71 6.16 12.49 6.57 11.36 51.07 2.09 7.11 3.81 74.44 76.78 30.80 61.07 5.27 59.48 82.60 12.22 14.47 91.18 16.38 22.28 18.94 21 Ix_AR3 ActiveIntronRegion 0 4.10 2.42 3.90 9.18 6.91 6.77 32.77 3.39 3.20 1.23 22.38 49.22 43.57 62.66 2.36 23.54 40.82 8.12 10.46 25.79 9.74 8.66 9.13 22 Ix_SR2 SilentIntronRegion 0 1.19 3.74 1.44 5.77 4.03 8.10 27.68 2.33 2.66 2.62 16.75 75.38 65.48 46.56 2.29 17.02 20.40 3.33 1.83 30.09 4.28 12.97 5.96 23 Ix_SR1 SilentIntronRegion 0 0.20 12.96 0.91 9.47 6.14 6.54 34.79 3.80 5.63 3.40 26.99 155.37 190.20 68.20 3.53 34.55 42.50 7.03 3.75 72.28 8.37 22.79 13.94 24 Ix_AR1 ActiveIntronRegion 0 0.00 7.49 0.00 5.51 0.00 2.67 38.80 5.52 8.24 0.65 46.63 147.60 210.41 116.44 7.75 71.33 42.76 17.30 11.58 71.42 29.35 28.89 31.30 25 E3_Aa NovelBoundary 0 0.00 0.00 2.19 1.83 4.24 7.84 41.38 2.14 11.08 3.71 30.22 140.60 109.08 97.48 18.54 36.66 17.20 9.12 22.49 56.31 21.07 8.88 27.74 26 ER3a ExonRegion 0 2.68 0.91 1.23 5.95 0.00 1.87 1.32 3.77 1.87 1.38 3.63 29.16 47.09 27.78 0.12 5.40 12.93 1.70 0.00 6.99 8.10 2.30 0.00 27 E3_Da NovelBoundary 0 0.00 12.04 0.00 8.02 0.00 8.23 15.06 8.91 10.30 2.47 53.70 149.15 144.15 78.58 0.00 62.46 64.98 20.31 9.60 68.84 65.92 15.98 50.02 28 E3a_E4a KnownJunction 0 3.11 5.53 1.60 4.13 0.00 0.00 0.00 2.14 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 2.94 3.09 0.00 0.00 29 Ix Intron 1 1.43 5.95 1.53 8.10 3.60 6.34 23.53 6.93 5.21 3.09 29.46 186.97 151.30 65.67 2.19 31.93 39.90 8.78 7.02 57.86 9.30 19.92 17.24 30 Ix_AR3 ActiveIntronRegion 0 1.58 4.44 1.06 6.70 4.38 6.86 24.76 7.20 5.40 2.81 29.63 203.48 146.62 69.87 2.22 31.23 35.59 8.56 5.21 54.64 8.23 20.04 15.44 31 Ix_SR1 SilentIntronRegion 0 2.46 4.88 0.84 10.79 5.06 6.81 26.41 5.11 4.82 2.97 15.60 155.98 83.20 48.39 2.66 20.28 38.98 8.50 4.41 54.53 7.25 19.75 13.48 32 Ix_AR2 ActiveIntronRegion 0 1.26 10.60 1.72 10.17 2.91 6.94 21.04 7.03 4.54 4.68 31.45 169.51 141.77 56.45 2.77 31.89 44.44 7.85 8.83 66.69 13.28 18.79 16.46 33 Ix_AR1 ActiveIntronRegion 0 0.93 4.76 2.99 9.60 1.57 3.53 22.42 6.12 5.62 1.79 28.74 160.51 197.83 67.69 1.14 36.82 48.82 10.99 11.24 57.13 7.54 21.08 25.80 34 E4_Aa NovelBoundary 0 14.08 25.85 12.60 21.18 0.00 0.00 9.36 6.57 16.78 7.33 0.00 13.95 6.82 4.71 5.32 8.72 3.55 7.88 0.00 26.85 0.00 0.00 0.00 35 ER4a ExonRegion 0 9.58 8.96 1.56 3.68 0.00 1.23 8.00 3.80 2.78 4.63 0.20 5.30 13.58 1.20 12.29 10.36 2.61 0.75 6.33 12.68 3.83 2.63 3.94 36 E4_Da NovelBoundary 0 6.08 3.35 8.28 8.46 3.48 0.00 3.89 20.78 4.54 2.61 0.00 0.00 14.77 0.00 6.06 15.04 12.16 7.05 8.00 11.31 0.00 0.00 0.00 37 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 38 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 39 Ix_AR2 ActiveIntronRegion 0 23.99 23.84 21.10 28.85 15.76 6.42 27.07 26.41 18.53 11.47 1.93 9.14 9.38 1.62 15.47 26.09 16.50 10.27 13.10 23.88 6.61 5.67 10.28 40 Ix_AR1 ActiveIntronRegion 0 23.41 23.13 16.73 23.13 22.66 4.07 33.55 26.90 17.91 9.39 0.24 14.21 7.18 1.02 14.23 12.54 12.58 5.66 12.24 26.26 5.51 2.47 7.98 41 Ix_SR1 SilentIntronRegion 0 12.90 12.62 10.35 19.60 10.48 2.58 21.12 22.74 13.28 8.25 1.86 10.92 19.61 1.80 7.10 10.50 9.40 5.93 8.45 13.05 2.79 1.40 8.98 42 E5_Aa NovelBoundary 0 26.45 33.28 24.75 17.78 28.44 0.00 32.59 22.84 20.75 9.21 0.00 18.61 22.73 4.94 24.97 25.29 13.00 22.72 17.32 27.61 0.00 0.00 11.61 43 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.38 0.00 0.00 0.00