Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-447D11.1 Gene 0 7.59 13.42 8.49 17.64 10.04 19.14 13.38 10.50 14.37 7.66 3.31 6.82 7.09 7.94 11.04 9.69 5.92 20.54 18.16 13.10 15.13 7.43 11.07 2 429315 Transcript 0 4.95 9.05 5.76 10.68 6.43 11.44 9.31 5.32 8.25 3.24 2.37 4.65 5.51 4.76 8.51 6.39 4.36 10.17 10.62 9.61 8.42 4.47 6.03 3 IG7_AR2 ActiveIntergenicRegion 0 3.71 6.41 5.99 4.37 4.69 13.33 6.53 2.07 5.56 3.57 3.90 2.27 2.56 9.05 12.22 12.36 8.13 16.09 15.70 8.88 9.55 2.87 12.97 4 ER1a ExonRegion 0 30.57 44.76 3.73 6.67 28.33 22.81 37.80 4.74 4.52 6.29 12.19 10.72 24.33 17.20 29.95 23.02 28.20 22.90 38.12 52.53 18.88 13.60 32.29 5 E1_Da NovelBoundary 0 1244.74 1025.15 1150.40 1305.13 933.02 619.64 1019.72 1255.10 1220.73 1152.94 424.00 147.20 173.20 145.92 313.25 1045.62 757.08 1780.51 936.12 918.75 392.35 353.32 966.31 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 I1 Intron 0 5.51 13.67 13.88 21.28 14.26 5.05 8.06 6.47 4.63 1.97 0.82 3.96 6.60 2.14 8.40 7.29 5.40 10.25 12.06 13.85 5.54 2.02 5.69 8 I1_SR1 SilentIntronRegion 0 4.90 15.94 13.37 18.88 11.99 4.41 8.40 7.66 4.45 1.77 1.33 4.07 4.92 1.80 8.00 10.53 7.35 13.33 14.06 14.40 7.02 2.31 6.74 9 I1_AR1 ActiveIntronRegion 0 4.25 13.99 17.16 23.49 10.22 5.31 4.39 6.72 4.00 3.12 0.56 5.42 4.80 2.28 8.21 6.87 5.13 12.14 21.26 11.50 8.18 2.11 5.25 10 I1_AR2 ActiveIntronRegion 0 1.82 12.77 11.40 20.22 9.52 5.54 6.50 5.02 2.36 2.21 0.00 0.00 19.41 2.61 7.35 7.46 5.14 11.82 8.44 10.74 8.35 2.08 6.83 11 I1_SR2 SilentIntronRegion 0 7.01 11.17 13.08 22.90 18.91 5.59 9.54 5.21 5.27 1.62 0.46 3.43 8.37 2.40 8.98 4.03 3.48 5.97 5.90 14.61 2.53 1.66 4.71 12 E2_Aa NovelBoundary 0 3.78 6.71 8.78 14.02 8.66 15.90 10.07 5.09 6.57 0.00 0.00 12.75 20.94 0.00 10.75 0.00 4.77 2.11 0.00 6.52 0.00 2.63 4.35 13 ER2a ExonRegion 0 9.05 29.50 33.04 46.29 27.59 27.46 25.45 21.83 21.83 8.38 7.78 31.88 23.45 18.98 28.76 19.94 9.67 15.45 22.88 25.68 7.89 8.89 7.91 14 E2_Da NovelBoundary 0 15.93 16.97 43.35 48.91 23.01 32.82 13.51 16.14 15.36 4.16 9.32 12.60 33.93 18.78 31.15 23.58 17.39 13.85 32.75 17.19 0.00 13.66 22.19 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2 Intron 0 7.35 15.71 14.90 23.02 14.45 9.64 13.88 9.29 8.57 4.97 1.10 6.34 11.00 2.54 6.47 7.67 3.10 11.83 14.68 13.94 5.90 3.19 8.10 17 I2_SR1 SilentIntronRegion 0 12.17 19.79 19.84 23.65 14.47 5.53 12.89 11.58 7.44 3.13 1.21 5.09 10.44 1.51 9.36 8.80 3.38 11.58 11.24 14.53 2.01 2.02 4.85 18 I2_SR3 SilentIntronRegion 0 8.01 20.56 21.47 26.59 17.76 9.07 13.74 12.39 7.13 6.09 1.38 7.88 15.15 4.18 14.05 9.93 4.56 14.09 21.42 21.23 5.10 3.16 7.85 19 I2_SR4 SilentIntronRegion 0 7.78 17.31 15.88 27.77 17.26 11.57 16.47 11.08 9.77 5.90 1.09 7.15 12.26 2.78 6.01 7.80 3.05 12.55 16.11 16.14 6.02 3.52 9.10 20 I2_AR4 ActiveIntronRegion 0 6.18 15.83 20.53 31.30 12.81 9.99 12.07 4.09 13.54 5.69 0.41 10.18 10.81 1.25 6.49 7.58 2.14 6.75 14.44 14.43 4.76 4.76 6.10 21 I2_SR6 SilentIntronRegion 0 5.28 10.18 9.49 12.10 8.35 7.04 9.49 4.72 6.88 3.32 1.08 4.41 7.44 1.92 4.07 6.66 2.69 10.61 10.81 7.12 7.35 2.85 7.52 22 Ix Intron 0 6.39 17.88 7.06 17.21 13.75 8.16 9.68 7.23 8.09 3.62 0.82 3.56 12.01 1.23 5.51 4.09 3.50 10.71 11.13 10.03 10.49 5.08 8.09 23 Ix_SR1 SilentIntronRegion 0 6.40 17.90 7.07 17.23 13.76 8.17 9.69 7.24 8.10 3.62 0.82 3.56 12.02 1.23 5.52 4.10 3.50 10.72 11.15 10.04 10.51 5.08 8.10 24 E3_Aa NovelBoundary 0 3.56 2.43 13.45 22.11 9.51 6.30 6.67 2.55 17.19 3.98 2.68 0.00 0.00 0.00 0.00 7.18 0.00 21.56 18.17 8.69 18.90 0.00 0.00 25 ER3a ExonRegion 0 1.11 3.21 2.35 8.87 2.81 2.29 4.67 1.48 3.77 0.06 1.08 0.00 0.15 2.04 1.11 1.56 3.47 2.34 10.05 7.79 5.79 3.20 3.03 26 E3_Da NovelBoundary 0 0.00 0.00 8.54 20.48 4.07 2.33 0.00 11.42 5.84 7.47 2.11 6.30 0.00 0.00 0.00 0.00 0.00 5.93 0.00 3.26 17.05 4.84 6.49 27 E3a_E4a KnownJunction 0 0.00 0.00 1.66 3.33 0.00 13.12 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 Ix Intron 0 4.81 8.52 10.95 12.77 5.30 7.15 6.24 5.70 9.65 2.79 0.79 1.29 5.36 1.00 6.67 9.17 2.88 18.72 13.91 9.79 16.29 5.58 7.52 29 Ix_SR1 SilentIntronRegion 0 4.82 8.54 10.98 12.80 5.31 7.17 6.26 5.71 9.67 2.79 0.79 1.29 5.38 1.00 6.68 9.19 2.89 18.76 13.94 9.81 16.33 5.59 7.54 30 Ix Intron 0 3.11 5.48 10.75 11.95 4.59 8.54 3.90 10.10 15.34 5.24 0.71 3.68 1.42 2.30 6.88 5.47 0.81 16.78 8.20 9.40 19.72 6.90 8.28 31 Ix_SR1 SilentIntronRegion 0 3.13 5.51 10.79 12.01 4.61 8.57 3.91 10.15 15.42 5.26 0.71 3.70 1.43 2.31 6.92 5.49 0.81 16.86 8.24 9.44 19.82 6.93 8.32 32 E4_Aa NovelBoundary 0 0.00 9.87 7.07 13.92 0.00 13.29 10.11 6.78 13.25 5.00 7.58 6.30 13.64 9.18 8.78 12.13 4.21 15.55 21.74 3.00 11.06 8.88 16.99 33 ER4a ExonRegion 0 0.02 0.20 0.61 1.77 0.00 1.89 1.79 0.00 5.76 1.69 2.70 0.17 3.55 0.73 3.52 0.00 0.00 10.57 1.61 3.16 3.74 0.04 2.91 34 E4_Da NovelBoundary 0 7.26 5.99 6.36 13.95 0.00 10.33 0.00 4.68 7.99 2.61 2.37 0.00 0.00 0.00 10.51 0.00 4.77 15.75 7.25 5.69 34.72 3.12 12.80 35 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 2.03 0.00 1.53 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 3.15 0.00 0.00 36 Ix Intron 0 2.84 4.29 5.25 12.07 4.10 5.98 2.54 1.48 5.65 2.62 1.11 1.37 1.48 2.82 2.52 3.99 0.63 17.27 8.55 5.71 17.31 3.99 11.82 37 Ix_SR1 SilentIntronRegion 0 3.17 4.79 5.71 12.99 4.55 6.33 2.69 1.66 5.92 2.93 1.24 1.53 1.66 3.15 2.82 3.81 0.50 18.42 9.54 6.38 18.82 4.44 12.25 38 Ix Intron 0 3.74 7.30 7.70 13.10 5.43 7.73 6.48 3.62 7.66 3.65 0.70 3.17 1.90 1.71 4.28 5.26 1.37 15.01 7.63 6.64 9.86 3.47 5.81 39 Ix_SR1 SilentIntronRegion 0 3.75 7.31 7.71 13.12 5.44 7.74 6.48 3.62 7.67 3.65 0.70 3.17 1.90 1.71 4.29 5.26 1.38 15.02 7.63 6.65 9.87 3.47 5.81 40 E5_Aa NovelBoundary 0 35.19 41.64 45.95 66.06 37.86 23.11 45.36 61.49 67.88 57.81 4.21 24.76 5.84 17.84 0.00 15.21 16.08 76.81 4.80 27.42 30.77 15.86 14.17 41 ER5a ExonRegion 0 11.72 13.45 6.11 12.32 4.93 13.30 12.82 7.49 9.14 3.68 1.89 11.79 16.61 9.88 20.47 6.39 5.07 10.94 20.46 14.38 9.19 8.30 15.34 42 E5a_E6a KnownJunction 0 0.00 5.00 8.84 14.35 0.00 0.00 0.00 6.94 14.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 43 E6_Aa NovelBoundary 0 15.71 6.45 1.66 9.36 3.23 0.00 12.19 2.18 7.75 0.00 2.00 0.00 6.17 4.94 0.00 0.00 7.95 0.00 16.85 0.00 14.89 0.00 0.00 44 ER6a ExonRegion 0 4.85 7.78 8.72 22.17 3.06 18.07 7.68 8.55 12.80 6.09 1.19 2.51 1.36 4.66 6.17 10.12 3.39 28.29 14.98 6.50 19.10 5.04 7.23 45 E6_Da NovelBoundary 0 7.26 5.79 6.36 3.50 0.00 2.10 12.98 4.48 3.59 2.82 0.00 0.00 0.00 7.42 4.45 11.88 9.07 40.71 17.79 5.94 3.09 0.00 0.00 46 E6a_E7a KnownJunction 0 2.89 5.85 3.90 8.26 8.66 25.78 16.52 5.42 14.64 5.40 0.00 0.00 0.00 2.24 14.96 15.64 4.58 16.95 13.74 8.88 25.21 11.14 0.00 47 Ix Intron 0 2.14 5.99 7.68 5.98 3.38 1.85 2.56 4.77 6.20 1.44 0.33 2.96 1.63 1.86 3.17 4.00 2.78 18.86 4.56 2.69 7.98 1.75 4.45 48 Ix_SR1 SilentIntronRegion 0 2.12 6.35 6.62 7.66 2.14 2.66 2.63 6.21 8.81 1.74 0.77 2.14 2.32 2.64 3.28 4.02 2.64 18.97 5.43 2.65 8.05 4.01 4.45 49 Ix_AR1 ActiveIntronRegion 0 2.17 5.76 8.50 4.78 4.30 1.27 2.53 3.74 4.32 1.23 0.00 3.57 1.13 1.30 3.12 4.01 2.89 18.88 3.94 2.73 7.98 0.11 4.48 50 ER7a ExonRegion 0 4.10 7.96 5.94 14.80 8.23 21.16 10.21 12.77 18.50 10.55 1.92 3.41 2.22 6.14 5.69 6.37 2.24 20.98 16.21 6.07 16.51 7.94 9.73