Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TREX1 Gene 0 74.24 17.18 53.20 18.06 20.06 20.52 13.92 48.01 25.76 25.35 117.11 32.85 24.76 54.71 118.62 135.77 135.47 39.21 33.64 28.20 26.49 15.04 22.43 2 296443 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 395677 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 433541 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 5 444177 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 456089 Transcript 0 28.23 0.00 7.66 0.00 0.00 11.87 0.00 4.76 8.04 1.16 14.11 0.00 0.00 2.18 5.07 30.59 13.09 0.00 0.00 2.75 0.00 0.00 0.00 7 492235 Transcript 0 3.04 0.00 0.00 0.00 3.90 0.00 0.00 8.46 1.79 1.67 2.32 5.70 0.00 0.00 5.56 17.35 8.88 0.00 0.00 0.00 0.00 5.02 0.00 8 436480 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 422277 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 0.00 0.00 0.42 0.00 0.00 0.10 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.53 0.00 0.78 0.00 0.00 0.00 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 Ix Intron 0 4.02 3.09 18.02 8.74 6.43 9.05 13.07 10.43 5.59 7.14 3.42 1.35 0.98 4.59 4.38 4.89 2.51 15.23 13.30 14.81 8.92 2.90 5.57 13 Ix_AR1 ActiveIntronRegion 0 4.04 3.10 18.11 8.78 6.47 9.10 13.13 10.48 5.62 7.17 3.44 1.36 0.98 4.62 4.41 4.91 2.52 15.30 13.37 14.87 8.97 2.91 5.60 14 ER2a ExonRegion 0 2.32 1.70 14.08 2.73 2.74 3.60 5.77 8.27 5.94 6.46 5.14 3.25 1.21 2.81 7.28 9.63 2.54 13.91 14.45 14.32 4.15 2.48 3.42 15 E2_Ab KnownBoundary 0 0.00 6.05 22.59 12.99 11.54 10.73 15.90 6.16 6.42 10.93 6.53 0.00 0.00 4.59 5.93 8.03 12.81 22.84 24.38 22.37 0.00 5.51 6.74 16 ER2b ExonRegion 0 10.27 7.13 33.65 9.66 10.53 6.25 13.81 18.93 11.96 13.50 3.99 5.08 1.55 10.69 2.47 12.43 7.80 28.50 35.49 25.30 13.08 7.97 16.65 17 E2_Da KnownBoundary 0 0.00 3.09 5.26 10.92 0.00 0.00 6.18 10.60 1.45 5.26 2.68 18.01 0.00 9.48 4.45 7.43 13.28 19.28 12.14 14.89 2.59 8.39 4.35 18 E2a_E2c NovelJunction 0 0.00 0.00 12.68 6.03 0.00 0.00 0.00 17.21 3.53 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.23 0.00 0.00 0.00 0.00 0.00 19 E2a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 20 E2_Ac KnownBoundary 0 0.00 6.18 3.40 3.66 7.47 0.00 2.12 10.19 6.13 6.47 0.00 0.00 0.00 0.00 0.00 3.25 14.21 23.30 0.00 8.18 0.00 0.00 3.50 21 ER2c ExonRegion 0 0.00 4.07 19.76 12.27 5.35 0.00 7.94 19.23 6.64 11.04 3.87 12.99 0.00 7.92 8.70 5.94 19.81 41.57 12.74 21.81 6.34 6.25 6.97 22 ER2d ExonRegion 0 5.03 5.29 23.10 7.80 4.09 5.20 7.43 12.70 11.56 14.60 3.75 0.87 0.00 8.25 4.87 7.36 7.53 26.88 20.01 17.48 11.87 5.33 12.05 23 E2_Db KnownBoundary 0 10.96 24.60 29.45 15.85 12.56 8.01 7.77 20.95 15.28 10.88 4.90 0.00 0.00 4.94 0.00 7.78 4.49 31.79 17.22 15.21 5.56 2.57 14.94 24 E2b_E2i KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER2e ExonRegion 0 10.69 15.18 17.98 3.26 6.79 7.25 3.97 5.90 8.45 4.64 5.89 0.00 0.00 5.35 10.86 7.65 8.98 10.32 6.80 8.85 6.26 3.35 4.12 26 E2_Ad KnownBoundary 0 6.89 2.63 11.15 2.06 6.96 2.10 0.00 0.00 4.20 3.01 0.00 0.00 0.00 2.47 10.63 4.36 4.21 11.52 13.27 3.26 0.00 0.00 0.00 27 E2_Ae KnownBoundary 0 3.70 3.35 6.53 0.00 4.24 0.00 0.00 0.00 4.86 3.09 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 3.20 0.00 2.94 0.00 28 E2_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E2_Ag KnownBoundary 1 240.04 23.48 18.60 3.53 32.26 55.37 15.41 17.17 7.47 7.71 77.28 0.00 0.00 24.02 126.34 135.61 141.84 24.75 4.24 23.27 24.22 13.04 14.43 30 ER2f ExonRegion 1 100.82 19.41 19.94 4.71 23.35 50.35 8.67 5.03 7.64 9.07 74.50 0.00 0.00 15.65 93.37 89.97 93.93 18.65 19.98 15.47 22.64 5.68 4.00 31 ER2g ExonRegion 1 229.38 37.11 24.66 7.33 39.47 76.56 19.86 17.28 11.27 10.90 145.93 0.00 0.00 41.62 218.32 215.85 188.98 29.56 20.70 24.47 39.67 17.97 16.15 32 ER2h ExonRegion 1 347.64 50.84 23.89 10.90 61.54 101.32 23.83 25.93 13.59 12.62 197.64 0.00 0.00 77.15 357.58 340.31 269.02 36.03 22.30 27.66 50.69 32.29 23.49 33 ER2i ExonRegion 1 360.35 47.12 27.83 13.82 67.43 101.91 29.73 33.38 18.00 11.86 233.16 1.11 0.00 82.41 282.75 369.14 293.78 48.46 20.66 39.21 47.91 33.87 30.21 34 E2_Dc KnownBoundary 0 71.94 22.30 16.03 9.92 21.99 26.75 3.58 27.48 12.09 1.45 40.69 0.00 0.00 7.06 19.53 21.79 58.25 34.66 4.42 26.46 7.78 5.51 11.95 35 E2c_E2h KnownJunction 1 212.48 13.02 9.05 11.25 32.51 28.73 20.09 23.33 8.30 3.33 120.14 6.30 0.00 14.07 84.43 235.24 146.52 39.80 16.57 14.25 20.51 23.27 17.93 36 E2c_E2j NovelJunction 0 19.04 0.00 3.55 1.63 11.29 0.00 0.00 3.53 1.79 2.31 6.74 0.00 0.00 0.00 5.07 14.78 12.16 7.92 7.53 0.00 7.29 0.00 6.91 37 E2c_E2k KnownJunction 0 3.04 0.00 0.00 0.00 3.90 0.00 0.00 8.46 1.79 1.67 2.32 5.70 0.00 0.00 5.56 17.35 8.88 0.00 0.00 0.00 0.00 5.02 0.00 38 E2c_E2l KnownJunction 0 28.23 0.00 7.66 0.00 0.00 11.87 0.00 4.76 8.04 1.16 14.11 0.00 0.00 2.18 5.07 30.59 13.09 0.00 0.00 2.75 0.00 0.00 0.00 39 ER2j ExonRegion 0 25.29 16.07 44.19 13.44 15.12 17.85 10.85 35.57 15.78 15.04 37.00 7.94 13.40 20.01 39.26 59.52 49.56 35.87 23.73 29.80 9.19 9.51 18.69 40 E2_Ah KnownBoundary 0 103.94 21.44 33.88 10.69 15.53 20.33 15.55 36.51 13.72 9.56 31.11 6.15 26.30 41.14 48.33 37.43 36.93 20.56 11.01 17.71 8.22 14.63 0.00 41 ER2k ExonRegion 1 215.12 29.21 40.21 17.35 28.46 38.01 28.77 44.15 22.23 13.55 134.42 7.87 14.07 58.47 120.53 260.47 150.34 48.21 20.56 25.92 25.04 27.65 15.75 42 E2_Ai KnownBoundary 0 111.65 35.39 31.02 7.26 12.14 7.55 23.41 26.08 18.61 12.44 38.17 35.56 5.68 16.07 49.82 89.81 53.02 19.69 28.42 30.49 8.46 2.76 8.54 43 ER2l ExonRegion 0 97.83 25.16 27.23 14.44 13.08 12.09 22.70 42.00 23.97 16.01 54.48 14.75 8.16 40.96 73.50 114.26 61.49 40.17 26.07 31.05 11.18 8.10 9.03 44 ER2m ExonRegion 1 58.03 30.00 34.68 11.32 8.62 2.65 17.43 28.14 17.29 19.58 102.69 18.52 29.96 33.54 59.31 49.33 131.58 19.20 21.90 28.31 27.49 7.44 8.73 45 E2_Aj KnownBoundary 1 52.97 19.93 37.17 11.95 0.00 4.49 18.20 37.34 19.82 30.41 257.85 25.21 0.00 48.44 115.58 51.61 287.89 25.70 13.93 17.32 50.23 11.45 8.54 46 ER2n ExonRegion 1 32.86 16.00 55.63 13.02 3.87 2.51 8.88 43.85 24.77 32.93 214.04 29.51 10.86 61.42 195.91 141.10 234.97 35.89 14.42 25.76 39.14 18.92 10.36 47 E2_Ak KnownBoundary 0 51.71 28.15 68.95 16.05 15.87 2.73 6.27 43.37 26.65 37.58 161.30 32.11 41.56 85.76 269.73 261.56 156.62 56.38 17.98 37.84 28.85 26.64 24.76 48 ER2o ExonRegion 0 86.87 22.11 77.59 24.30 27.71 32.70 22.01 74.20 41.07 42.12 216.49 70.63 45.15 118.73 244.31 276.55 255.84 65.01 45.85 38.46 45.28 28.12 38.67 49 E2_Al KnownBoundary 0 128.91 40.91 90.95 37.32 43.97 22.88 31.49 80.83 45.11 44.43 288.18 133.54 72.40 126.38 243.65 230.11 301.82 67.36 41.51 40.78 71.54 24.62 39.52 50 ER2p ExonRegion 0 156.95 29.90 113.61 44.35 40.88 38.44 23.26 119.59 58.93 58.85 307.82 92.01 72.81 133.28 295.94 325.84 323.31 72.75 60.59 48.22 56.73 29.97 46.24 51 E2_De KnownBoundary 0 49.64 40.65 142.81 60.76 3.90 32.48 18.46 128.85 66.61 51.44 236.80 105.18 46.26 213.49 450.34 446.81 246.84 61.43 87.63 51.07 43.43 32.88 66.41 52 ER2q ExonRegion 0 195.41 24.77 75.05 25.43 37.63 28.35 12.37 64.17 35.16 27.20 177.21 50.32 32.56 75.72 167.95 195.65 235.75 34.58 58.66 23.57 41.49 20.36 29.11 53 ER2r ExonRegion 0 12.70 8.13 3.68 1.36 5.35 1.83 2.65 5.19 2.47 2.29 17.40 0.00 0.00 4.87 11.61 14.86 16.50 0.00 0.00 4.26 0.00 4.17 2.94 54 ER2s ExonRegion 0 2.12 8.13 1.84 0.00 2.68 0.00 2.65 3.46 1.24 0.57 3.87 0.00 0.00 2.44 4.35 2.97 11.55 0.00 0.00 0.00 0.00 1.04 0.00