Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM110 Gene 0 6.34 2.95 5.82 3.41 3.18 5.30 5.32 6.39 4.81 4.88 18.15 5.48 10.28 28.95 15.71 13.99 12.49 12.27 5.76 6.41 15.73 11.69 14.46 2 355083 Transcript 0 1.43 0.50 0.33 0.21 0.23 1.22 1.39 0.26 0.32 1.13 1.24 0.08 0.10 1.33 0.87 1.61 3.29 0.30 0.20 0.27 3.29 0.44 2.09 3 307872 Transcript 0 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 467979 Transcript 0 1.86 0.96 0.00 0.00 1.43 1.45 1.17 3.44 1.25 0.00 17.77 0.78 0.00 19.28 6.82 16.19 11.55 4.93 2.61 10.30 1.77 3.22 0.01 5 485356 Transcript 0 4.53 2.84 3.60 4.07 3.45 4.70 7.01 5.07 2.81 4.62 15.65 3.60 5.02 21.62 14.19 10.92 13.24 12.42 2.33 6.15 10.49 9.55 8.21 6 464769 Transcript 0 2.16 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.58 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.69 0.00 7 477591 Transcript 0 0.00 0.55 0.00 0.00 0.00 0.00 0.71 0.67 0.01 0.00 0.00 0.96 0.02 0.32 0.00 0.81 0.02 0.00 0.00 0.00 0.00 1.12 0.80 8 482155 Transcript 0 0.26 0.00 0.00 0.00 2.19 0.00 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.07 0.00 2.20 0.00 0.00 0.00 0.00 1.36 0.00 0.00 9 IG8 Intergenic 0 19.52 22.91 6.28 6.60 23.48 34.59 21.20 12.86 6.44 5.69 2.28 5.44 3.03 4.79 2.78 4.74 4.32 17.87 9.91 7.10 1.44 10.36 4.13 10 IG8_AR4 ActiveIntergenicRegion 0 11.83 8.51 1.71 4.75 19.25 29.41 18.29 6.03 4.88 7.03 0.00 3.34 5.42 3.58 0.00 0.00 4.48 6.05 5.96 6.68 0.00 6.59 3.99 11 IG8_SR4 SilentIntergenicRegion 0 7.76 15.16 4.97 3.84 22.29 28.34 22.71 14.40 6.17 4.99 2.43 7.39 7.29 5.53 1.19 4.15 5.72 10.19 5.49 7.88 0.49 15.02 3.02 12 IG8_AR3 ActiveIntergenicRegion 0 12.47 22.99 4.94 6.31 26.33 44.30 25.59 14.19 9.40 6.80 2.85 6.50 5.65 7.85 1.99 7.05 4.74 28.45 10.20 11.79 2.83 14.80 5.76 13 IG8_SR3 SilentIntergenicRegion 0 20.32 16.91 5.88 10.82 32.66 50.80 31.72 25.15 11.90 9.24 3.91 8.13 3.60 7.77 4.04 5.03 6.35 21.91 12.74 8.91 2.02 17.96 4.03 14 IG8_AR2 ActiveIntergenicRegion 0 33.47 41.46 10.85 11.12 34.81 55.79 29.17 18.43 9.24 7.57 3.56 7.35 2.73 6.36 4.55 7.19 7.19 32.82 17.06 8.97 2.14 12.27 8.18 15 IG8_SR2 SilentIntergenicRegion 0 37.14 24.12 4.41 4.60 23.89 33.47 16.60 8.12 5.00 5.03 4.76 2.36 0.28 2.89 12.22 10.27 2.13 9.50 16.47 5.67 1.14 12.02 1.42 16 IG8_AR1 ActiveIntergenicRegion 0 37.49 34.19 10.78 8.34 27.53 29.70 22.85 12.02 3.52 6.34 1.52 5.43 0.62 2.45 4.13 4.18 3.34 10.80 11.46 5.14 0.87 7.03 2.64 17 ER1a ExonRegion 0 2.06 0.23 0.00 0.00 0.31 1.73 1.97 0.20 0.32 2.10 1.82 0.00 0.00 0.70 0.58 2.46 5.66 0.11 0.00 0.00 5.54 0.00 2.85 18 E1_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 2.84 2.25 0.00 0.00 3.33 2.58 0.00 0.00 0.00 0.00 4.19 9.26 1.99 0.00 0.00 6.12 0.00 0.00 19 E1_Ac KnownBoundary 0 3.70 6.25 0.00 0.00 11.97 19.31 12.54 9.49 1.68 1.42 36.75 0.00 0.00 6.83 4.45 23.16 26.46 26.41 12.24 2.81 22.55 0.00 79.56 20 ER1b ExonRegion 0 4.23 2.03 0.00 0.00 5.91 9.27 6.41 3.00 1.24 2.29 20.75 0.00 0.00 5.13 2.90 15.49 24.50 3.21 3.02 1.57 16.70 0.00 37.56 21 ER1c ExonRegion 0 2.46 2.53 3.24 2.89 1.74 5.44 4.87 9.74 5.64 5.20 36.39 2.61 1.04 32.80 19.56 23.03 21.51 21.54 10.14 6.83 25.61 16.40 33.27 22 E1a_E2a KnownJunction 0 3.26 0.00 0.00 0.00 0.00 2.16 0.00 4.19 0.00 0.00 14.64 0.00 0.00 27.72 6.30 26.66 7.29 4.35 4.80 9.08 0.00 0.00 0.00 23 E1a_E3a KnownJunction 0 6.89 6.12 20.82 10.19 7.89 0.00 10.78 24.23 9.90 23.10 79.55 11.85 13.64 68.93 89.25 63.91 34.41 44.77 11.95 20.07 58.01 47.03 68.55 24 ER2a ExonRegion 0 2.33 2.87 0.00 0.00 0.48 2.19 1.48 3.94 1.98 0.00 19.92 2.33 0.00 20.63 8.11 11.24 11.09 5.47 3.02 9.55 5.31 4.38 0.04 25 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.82 0.00 2.03 2.18 1.77 0.00 18.74 0.00 0.00 9.48 6.06 10.68 16.27 4.97 0.00 12.27 0.00 5.27 0.00 26 I2_AR1 ActiveIntronRegion 0 10.76 1.14 5.29 3.44 5.12 1.21 5.60 4.91 2.13 1.29 0.69 1.26 2.87 0.21 1.87 3.94 2.03 2.63 1.05 3.51 1.77 0.30 1.46 27 I2_SR2 SilentIntronRegion 0 12.39 0.92 5.73 6.83 5.42 0.73 5.38 6.80 0.84 1.20 0.00 2.63 4.25 0.40 0.99 3.82 0.50 1.97 2.49 2.20 1.03 0.00 0.96 28 ER3a ExonRegion 0 14.95 13.57 21.63 10.96 9.83 8.31 19.24 26.07 12.48 18.94 81.85 12.55 20.87 84.95 65.49 41.91 73.63 53.40 9.43 26.75 56.44 52.05 42.55 29 E3a_E4b KnownJunction 0 16.67 17.63 22.86 14.45 12.65 18.97 26.54 25.71 12.59 14.26 76.60 26.11 21.26 107.01 59.58 23.16 73.49 56.13 8.94 21.54 49.55 64.60 58.22 30 ER4a ExonRegion 0 8.47 7.12 8.58 7.50 8.03 12.84 13.24 12.10 5.56 10.90 37.69 6.49 11.73 50.35 26.11 13.37 31.36 27.72 4.78 10.64 24.24 26.04 20.56 31 ER4b ExonRegion 0 16.85 10.41 25.70 19.31 24.53 56.80 33.94 27.63 19.75 22.21 105.61 24.12 38.43 162.64 76.41 51.57 76.61 53.18 11.00 32.19 60.73 57.91 42.68 32 E4_Da NovelBoundary 0 22.23 4.93 29.60 19.21 14.18 19.87 38.95 23.29 24.71 23.02 95.92 7.05 50.16 118.78 71.82 47.77 53.58 56.38 0.00 38.93 50.53 77.89 28.00 33 E4b_E5a KnownJunction 0 44.67 6.51 38.79 25.64 20.03 33.79 37.41 24.89 18.20 42.90 116.66 17.11 39.77 192.66 126.46 74.17 85.93 75.40 40.00 26.78 103.11 62.46 51.82 34 ER4c ExonRegion 0 30.81 5.54 35.54 21.43 19.62 27.71 35.53 27.75 22.85 37.47 119.95 10.10 52.37 183.25 108.80 66.87 73.72 76.99 24.07 30.73 89.37 74.89 45.19 35 ER5a ExonRegion 0 18.98 10.42 32.44 14.73 11.54 12.66 11.52 19.98 14.36 27.38 93.48 26.47 25.60 149.39 81.00 60.83 70.27 57.27 21.44 31.29 68.91 55.62 45.28 36 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.90 0.00 0.00 0.00 0.00 0.00 1.26 4.69 0.00 0.00 10.18 9.02 12.30 4.21 4.06 0.00 3.39 0.00 0.00 0.00 37 E5a_E7a KnownJunction 0 24.08 9.01 32.97 21.51 8.57 12.44 5.52 27.07 29.89 24.04 99.08 18.61 59.41 204.60 75.53 74.08 73.40 36.77 17.22 32.09 76.23 93.93 43.96 38 E6_Aa NovelBoundary 0 3.26 2.89 1.83 4.86 11.88 0.00 16.12 8.54 2.69 2.69 4.11 11.70 0.00 7.30 4.45 3.25 8.70 8.29 0.00 2.81 5.81 0.00 0.00 39 ER6a ExonRegion 0 5.12 1.41 2.21 2.81 2.31 1.27 7.78 3.12 2.86 1.71 4.57 4.31 3.34 4.32 7.43 7.09 4.15 5.49 2.20 4.41 7.24 2.59 4.06 40 E6_Da NovelBoundary 0 0.00 3.22 1.83 1.23 0.00 2.73 17.89 3.70 3.04 0.00 0.00 0.00 0.00 7.24 0.00 3.67 3.74 2.11 0.00 8.69 8.03 0.00 0.00 41 ER7a ExonRegion 0 42.31 15.89 39.78 22.80 22.50 31.39 27.55 40.84 38.57 31.54 102.08 41.07 68.98 200.92 84.55 71.07 76.68 83.52 26.92 36.28 100.71 69.59 73.16 42 E7a_E8a KnownJunction 0 83.79 33.42 47.31 30.97 34.72 46.56 39.35 53.31 51.97 39.57 104.34 32.11 79.05 217.61 61.93 63.57 54.23 119.01 48.66 47.23 99.21 49.66 71.02 43 ER8a ExonRegion 0 69.38 16.82 34.18 22.38 32.04 28.24 30.64 50.08 43.59 31.51 134.91 35.63 80.39 185.46 88.49 100.75 63.44 105.84 51.01 41.49 98.29 76.88 103.08 44 E8a_E10a KnownJunction 0 22.97 12.30 29.51 20.81 8.40 27.43 36.74 48.55 38.05 30.62 92.34 73.97 176.94 234.33 131.41 123.90 57.69 96.92 58.64 39.05 118.49 72.13 82.03 45 ER9a ExonRegion 0 4.32 0.00 0.00 0.00 0.00 0.00 0.90 0.00 1.17 0.00 0.00 0.00 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 1.44 1.39 0.00 46 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER10a ExonRegion 0 25.89 17.96 36.79 24.97 19.93 42.47 26.52 42.98 37.47 32.95 112.98 47.45 95.99 187.77 88.57 87.96 69.80 81.74 42.07 45.52 120.13 75.42 83.56 48 E10a_E12a KnownJunction 0 27.34 21.51 38.14 17.95 26.83 27.09 13.43 33.11 33.62 35.73 91.97 18.91 81.00 175.88 81.46 102.45 65.26 94.68 26.82 21.60 76.11 76.97 138.03 49 ER11a ExonRegion 0 0.00 1.09 0.00 0.00 0.00 0.00 1.42 1.35 0.01 0.00 0.00 1.91 0.05 0.63 0.00 1.63 0.03 0.00 0.00 0.00 0.00 2.24 1.61 50 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER12a ExonRegion 0 19.58 20.84 35.84 14.99 16.72 27.97 20.85 42.35 36.13 36.99 92.78 18.40 92.63 164.04 87.04 101.80 56.94 92.39 39.02 22.34 79.88 69.28 129.21 52 ER12b ExonRegion 0 16.12 7.96 40.16 19.86 12.95 21.94 32.42 48.77 32.22 35.00 99.23 39.49 108.88 191.34 121.69 114.77 80.73 69.89 46.38 37.98 109.38 86.44 115.71 53 E12_Da KnownBoundary 0 20.89 18.02 40.18 23.34 11.63 16.24 24.95 30.56 19.39 43.65 149.09 24.31 119.31 204.66 106.19 97.24 107.43 50.16 26.26 51.26 140.85 77.28 67.35 54 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 4.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.76 0.00 0.00 0.00 0.00 2.72 0.00 0.00 55 E12a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER12c ExonRegion 0 55.02 15.11 28.20 13.06 11.27 27.25 26.06 30.88 17.32 24.76 86.65 28.29 54.55 131.60 78.40 71.61 51.87 53.59 29.60 27.84 65.41 53.28 79.80 57 E12_Db KnownBoundary 0 10.52 3.29 25.63 10.02 14.60 5.05 11.44 27.11 12.44 11.77 41.43 11.70 32.79 81.41 38.20 35.03 38.24 31.92 23.15 18.09 35.77 22.29 22.71 58 ER12d ExonRegion 0 12.62 17.93 18.43 9.93 22.00 11.32 23.94 15.69 12.84 11.41 40.57 3.47 18.76 101.70 57.83 34.06 30.62 28.88 21.46 19.23 44.71 31.20 49.42 59 E12_Dc KnownBoundary 0 3.56 5.33 26.97 14.78 4.24 10.73 8.44 10.39 8.91 5.53 14.16 0.00 0.00 74.70 22.62 19.31 26.55 14.55 16.85 8.44 31.07 22.29 23.05 60 ER12e ExonRegion 0 0.80 0.77 0.67 0.42 0.15 0.72 0.81 0.33 0.32 0.16 0.65 0.16 0.20 1.96 1.17 0.75 0.91 0.49 0.40 0.55 1.03 0.88 1.32 61 E12_Dd NovelBoundary 0 79.27 12.50 21.08 25.37 18.59 9.43 23.41 33.11 17.45 11.79 47.85 30.76 15.10 41.79 10.51 42.47 17.02 18.53 11.20 8.44 11.24 8.21 15.54 62 E13_Aa NovelBoundary 0 53.12 3.09 15.14 11.45 33.87 5.11 24.25 6.41 17.65 7.98 27.06 12.45 28.41 21.90 11.62 30.42 17.20 8.66 18.82 10.80 23.10 13.59 16.30 63 ER13a ExonRegion 0 0.52 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.14 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E13_Da NovelBoundary 0 42.38 0.00 4.35 3.90 12.56 2.78 4.06 16.80 9.43 1.02 20.85 6.30 0.00 26.78 4.45 8.37 8.60 7.01 3.58 21.35 11.06 2.82 15.88 65 Ix_SR2 SilentIntronRegion 0 1.43 3.28 5.85 2.50 0.00 2.58 2.32 3.00 4.16 1.15 4.30 0.00 0.00 5.30 6.22 1.27 6.87 4.11 0.00 1.61 7.78 1.02 3.60 66 Ix_AR6 ActiveIntronRegion 0 8.47 2.03 4.49 2.50 0.00 1.83 3.09 1.73 4.73 0.00 0.00 0.00 0.00 4.87 0.97 0.00 3.85 1.85 3.19 2.13 6.61 7.99 0.00 67 Ix_AR5 ActiveIntronRegion 0 10.88 2.03 3.68 2.73 0.76 1.83 5.30 1.73 3.71 1.15 2.49 0.00 0.00 1.62 2.90 1.27 4.24 1.85 3.19 2.13 6.61 8.33 0.00 68 Ix_AR4 ActiveIntronRegion 0 9.74 0.95 2.94 4.45 4.99 5.01 6.00 1.73 4.28 1.15 4.38 0.00 0.00 0.97 2.90 2.97 5.50 1.85 4.46 2.13 7.93 8.75 0.00 69 Ix_SR1 SilentIntronRegion 0 6.05 6.10 4.03 4.09 5.35 3.67 6.62 1.73 3.71 2.29 9.66 3.71 0.00 5.57 0.83 2.97 3.30 2.38 4.10 0.30 5.67 6.25 0.84 70 Ix_AR3 ActiveIntronRegion 0 4.23 6.10 2.45 4.09 5.35 3.67 8.30 1.73 2.36 2.29 9.49 4.33 0.00 9.60 2.90 2.97 3.30 2.69 3.19 2.13 7.01 3.03 2.94 71 Ix_AR2 ActiveIntronRegion 0 1.62 6.10 3.10 4.01 4.72 3.34 8.64 1.02 1.38 2.29 8.53 4.33 0.00 13.95 3.75 1.05 4.66 1.85 3.19 2.13 12.96 3.19 2.94 72 ER14a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 ER15a ExonRegion 0 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00