Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ZNF445	Gene	0	36.68	97.19	45.83	80.71	62.48	81.16	91.84	65.18	44.41	47.10	43.21	31.16	42.99	54.86	35.24	57.99	52.32	143.29	76.49	47.16	36.83	27.24	36.64
2	396077	Transcript	0	23.88	23.41	10.73	17.38	12.57	36.28	28.13	31.88	19.56	23.19	16.06	23.04	24.40	13.29	27.53	33.03	34.05	38.84	23.39	33.73	11.27	8.05	27.50
3	425708	Transcript	0	0.00	0.00	0.00	1.33	1.17	0.77	1.44	0.02	0.00	0.02	0.06	0.00	0.00	0.02	0.00	0.91	0.03	0.56	0.03	0.02	0.00	0.00	0.02
4	474600	Transcript	0	0.94	4.19	3.58	2.57	1.56	11.96	7.95	2.63	2.08	5.04	1.83	0.38	0.00	2.93	2.03	2.19	5.70	30.66	9.79	7.67	2.86	1.78	0.73
5	460529	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	430301	Transcript	0	3.45	11.28	9.92	18.50	6.79	15.38	20.71	13.36	15.39	19.23	13.94	2.61	2.83	2.71	4.15	22.32	28.17	87.33	31.42	15.43	17.67	9.12	12.34
7	296111	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	340674	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	0.48	4.62	0.00	0.00	0.36	3.17	8.06	0.00	0.00	0.00	4.22	0.00	0.00	2.07	0.00	1.89	1.65	1.18	2.17	2.61	6.31	1.23	4.27
10	ER1b	ExonRegion	1	8.90	17.64	3.59	3.22	2.26	31.90	25.20	5.04	3.62	5.71	16.76	0.00	0.00	3.67	16.51	19.06	18.95	23.45	7.96	14.01	23.86	12.79	19.70
11	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	4.39	0.00	0.00	0.00	0.00	3.93
12	E1a_E2a	KnownJunction	0	6.15	9.47	11.71	8.02	0.00	33.79	15.32	18.94	9.98	18.08	2.21	6.30	0.00	4.77	0.00	8.37	17.86	11.07	4.80	12.08	2.84	2.76	8.71
13	E1a_E3c	KnownJunction	0	0.00	3.35	1.77	0.00	0.00	18.57	6.32	2.42	1.48	7.15	2.16	0.00	0.00	2.47	0.00	0.00	4.30	31.67	9.51	12.21	3.15	3.12	0.00
14	ER1c	ExonRegion	0	0.00	0.00	0.00	0.17	0.07	1.16	1.22	0.00	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.07
15	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2a	ExonRegion	1	41.62	37.35	9.75	26.73	25.14	38.76	40.94	44.82	29.14	28.30	29.91	39.78	48.80	21.82	55.07	57.68	50.23	66.61	41.98	55.38	19.70	13.35	46.29
17	E2_Da	NovelBoundary	1	459.79	420.19	522.78	505.00	388.12	242.25	563.65	461.18	497.59	387.64	177.10	48.77	92.20	47.97	128.56	445.87	484.06	584.49	384.11	569.37	380.36	157.74	435.61
18	E2a_E3c	KnownJunction	0	0.00	9.34	17.89	32.46	8.57	16.30	26.06	28.96	17.19	36.67	73.97	29.86	20.62	29.96	10.75	57.34	73.87	142.52	103.44	75.36	78.58	30.74	48.23
19	ER2b	ExonRegion	0	22.33	22.57	12.93	26.37	22.07	20.54	29.86	29.73	24.64	30.85	64.75	21.00	19.46	20.95	11.61	61.52	76.75	115.48	79.32	78.72	54.76	26.15	38.03
20	ER3a	ExonRegion	0	0.00	0.00	0.00	3.82	3.44	1.15	3.10	0.05	0.00	0.07	0.00	0.00	0.00	0.05	0.00	2.72	0.09	1.69	0.09	0.00	0.00	0.00	0.00
21	E3_Ab	KnownBoundary	0	0.00	0.00	1.69	0.00	7.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	2.06	3.74	4.94	5.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3b	ExonRegion	0	1.06	3.05	5.21	11.58	7.36	16.96	21.51	10.80	5.25	11.18	18.85	4.33	2.35	11.37	6.53	26.75	16.50	42.96	30.26	21.81	17.63	7.29	16.15
24	ER3c	ExonRegion	0	6.36	17.29	24.26	41.28	14.31	28.97	39.21	41.05	40.45	42.61	50.15	11.87	14.17	49.89	38.60	81.00	68.87	279.99	112.46	80.03	48.89	24.32	57.69
25	E3_Da	KnownBoundary	0	3.56	6.71	3.46	20.68	12.14	35.89	21.02	6.24	13.89	12.73	21.22	0.00	13.80	11.89	10.38	41.70	12.53	102.06	47.44	37.14	33.36	13.04	26.97
26	E3a_E3e	KnownJunction	0	0.00	3.22	3.25	11.69	0.00	2.78	2.16	4.39	1.79	7.63	2.58	0.00	0.00	0.00	0.00	0.00	0.00	43.65	4.61	6.26	0.00	0.00	0.00
27	E3a_E3f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3b_E3f	KnownJunction	0	0.00	0.00	1.63	0.00	0.00	2.78	0.00	7.31	3.50	11.15	2.58	0.00	0.00	0.00	0.00	8.37	4.58	24.62	13.84	3.13	6.05	0.00	4.18
29	E3_Af	KnownBoundary	0	0.00	12.96	1.69	1.80	4.24	15.10	12.41	12.03	6.71	14.34	22.27	0.00	0.00	17.54	0.00	29.39	36.28	62.18	27.39	23.65	20.14	5.76	20.57
30	ER3d	ExonRegion	1	4.07	14.16	12.58	42.35	12.14	51.28	31.16	31.18	30.40	38.47	50.03	8.83	23.99	45.16	57.80	58.19	54.08	220.88	89.31	71.69	68.40	26.60	47.78
31	ER3e	ExonRegion	1	2.12	18.30	13.48	42.93	8.03	58.68	31.78	25.06	29.03	36.13	53.15	4.33	30.49	43.04	46.42	68.36	67.67	206.02	84.41	74.47	59.50	19.79	55.80
32	ER3f	ExonRegion	1	2.12	18.30	13.48	42.93	8.03	58.68	35.08	25.93	27.17	37.85	48.32	4.33	28.14	43.85	43.52	68.36	69.32	209.72	74.86	73.40	57.30	16.67	54.33
33	ER3g	ExonRegion	0	3.17	18.30	13.48	41.57	8.03	58.68	34.42	26.79	27.79	36.13	47.36	6.49	23.45	47.10	44.97	69.84	69.32	210.64	74.86	72.34	56.19	16.67	51.39
34	ER3h	ExonRegion	0	6.93	23.98	17.75	39.62	6.46	55.01	38.35	36.18	32.28	45.24	50.12	11.50	16.01	66.25	33.91	55.96	85.94	214.85	74.36	62.80	54.26	15.52	36.05
35	E3_Dd	KnownBoundary	0	3.63	2.83	7.27	15.85	0.00	9.99	10.29	2.51	4.92	9.27	4.79	6.00	0.00	19.07	0.00	11.62	24.87	26.94	22.49	17.26	6.18	0.00	7.17
36	E3d_E3g	KnownJunction	0	14.08	18.62	23.80	32.30	7.22	36.46	50.43	32.86	33.51	41.58	30.85	0.00	6.98	8.71	12.36	25.04	62.65	179.91	69.27	39.18	36.14	14.57	0.00
37	E3_Ag	KnownBoundary	0	6.15	5.79	14.07	11.05	7.39	2.16	21.02	19.30	19.65	23.83	28.32	0.00	7.14	17.01	0.00	7.43	29.27	84.56	61.84	11.06	17.17	15.98	3.59
38	ER3i	ExonRegion	0	12.70	21.69	26.55	39.07	16.05	44.01	50.75	41.48	34.58	54.29	59.92	12.99	23.45	81.21	32.88	48.54	89.12	228.51	92.38	48.23	44.07	30.56	34.26
39	ER3j	ExonRegion	0	12.70	20.34	26.96	38.84	17.39	44.93	50.97	45.80	35.82	55.62	57.99	12.99	23.45	82.83	31.91	44.58	80.87	231.89	90.78	44.68	48.48	30.21	29.37
40	ER3k	ExonRegion	0	10.45	20.38	20.99	32.47	19.05	39.24	38.63	43.28	37.35	38.92	46.78	13.80	26.95	65.17	34.66	50.82	65.35	198.68	79.54	46.90	49.63	22.63	37.21
41	E3_De	KnownBoundary	0	0.00	2.76	4.20	19.08	0.00	4.49	15.46	10.02	11.78	17.51	13.79	0.00	5.84	4.41	0.00	14.95	25.25	65.12	16.00	18.86	16.68	8.39	15.37
42	E3e_E3h	KnownJunction	0	6.96	15.79	15.82	48.98	15.70	10.68	27.07	25.10	25.75	26.35	17.64	7.50	0.00	2.94	6.18	15.72	53.02	120.34	34.07	17.83	34.41	25.47	25.61
43	E3e_E3i	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E3_Ah	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E3_Ai	KnownBoundary	0	9.56	5.92	14.69	18.91	3.48	13.57	19.43	16.47	21.09	14.42	10.79	0.00	6.33	16.78	4.45	7.26	8.32	87.18	36.90	33.49	29.90	27.56	3.59
46	ER3l	ExonRegion	0	8.47	20.34	17.77	43.61	16.05	29.34	40.38	31.98	35.82	39.57	40.59	12.99	14.07	51.97	52.22	32.69	62.72	183.85	70.08	52.13	58.40	39.59	32.30
47	ER3m	ExonRegion	0	8.47	22.37	17.97	44.98	18.73	26.90	40.16	36.87	36.23	40.91	41.24	12.99	14.07	59.55	47.39	33.68	61.62	187.24	66.89	47.52	55.83	40.98	32.30
48	ER3n	ExonRegion	1	10.06	16.64	19.23	48.42	19.11	34.66	42.07	33.09	38.14	36.42	45.25	4.42	3.54	75.97	37.66	50.77	52.68	215.55	73.65	51.37	51.49	36.87	33.02
49	E3_Df	KnownBoundary	0	3.04	12.37	6.27	2.90	20.37	10.51	8.13	3.70	1.10	4.78	4.63	0.00	0.00	2.47	0.00	0.00	3.83	31.92	0.00	0.00	5.50	0.00	4.18
50	E3f_E4a	KnownJunction	0	7.48	3.35	7.98	30.60	0.00	39.69	28.88	29.24	34.17	24.85	25.48	17.26	18.67	69.69	13.35	64.34	45.16	166.93	64.00	65.77	35.89	14.27	27.83
51	E3f_E5a	NovelJunction	0	3.63	5.59	5.88	1.76	0.00	0.00	2.25	0.00	0.00	0.00	4.79	0.00	0.00	13.07	0.00	11.28	13.65	41.83	22.31	0.00	2.59	0.00	0.00
52	ER3o	ExonRegion	0	1.87	5.03	5.38	5.14	3.13	5.36	9.59	2.84	2.68	2.94	1.51	0.75	0.00	3.39	4.06	4.38	7.09	29.65	10.07	3.14	2.57	0.44	1.46
53	E3_Dg	NovelBoundary	0	0.00	14.34	16.17	5.33	6.62	2.16	4.11	3.61	6.28	2.74	2.05	0.00	6.01	2.18	0.00	3.67	4.68	40.46	3.76	8.18	6.30	3.12	0.00
54	E4a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	E4b_E4b	KnownJunction	0	0.00	9.01	9.70	11.52	4.16	19.70	24.33	10.23	8.13	17.06	9.27	6.45	0.00	2.94	0.00	11.19	22.53	81.17	18.54	11.95	17.30	2.82	20.06
56	E4_Ab	NovelBoundary	0	0.00	8.68	8.52	14.68	11.71	33.84	33.61	9.53	10.21	15.42	22.06	12.75	0.00	32.08	8.78	42.47	28.14	92.07	20.42	25.25	28.79	7.35	25.87
57	ER4a	ExonRegion	1	4.23	8.13	12.13	34.62	4.55	40.53	38.39	29.73	41.25	38.42	30.15	15.15	0.00	67.73	17.12	59.74	49.51	212.86	58.93	52.55	42.09	14.38	41.70
58	ER4b	ExonRegion	1	5.64	8.13	12.66	34.53	5.35	47.68	44.57	27.08	41.17	42.82	38.01	17.32	0.00	66.05	17.41	56.47	52.81	214.34	59.46	51.06	37.46	12.50	45.03
59	ER4c	ExonRegion	1	6.35	10.17	14.70	35.44	5.35	40.34	45.68	24.20	39.52	44.73	36.73	17.32	0.00	60.90	18.86	59.44	56.12	218.96	49.37	47.87	38.56	9.38	42.58
60	ER4d	ExonRegion	0	3.75	23.82	16.10	33.22	16.05	48.83	51.45	24.10	39.03	42.96	45.06	14.84	8.44	59.30	26.44	88.48	67.72	222.15	73.26	41.70	40.49	15.48	54.29
61	E4_Dc	KnownBoundary	0	3.19	6.12	1.80	3.56	12.48	18.40	19.08	11.30	12.36	11.09	23.27	0.00	0.00	13.95	0.00	32.81	28.99	42.90	20.71	11.38	11.31	2.94	26.72
62	E4c_E4c	KnownJunction	0	3.11	32.30	15.26	25.01	20.46	35.26	40.98	13.64	35.04	30.81	34.69	0.00	8.12	2.77	6.18	94.42	54.42	160.67	78.03	27.55	29.78	21.00	36.54
63	E4c_E4d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E4_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E4_Ad	KnownBoundary	1	9.04	6.25	8.01	12.22	11.04	20.56	10.55	17.50	13.86	14.69	17.32	0.00	6.82	18.48	5.93	41.01	7.95	119.05	12.99	24.74	7.91	5.57	22.37
66	ER4e	ExonRegion	0	8.47	32.54	17.16	33.39	24.08	55.93	54.28	25.93	41.38	45.30	55.09	12.99	23.45	62.53	27.56	108.48	62.72	242.98	81.23	48.94	35.26	18.75	60.20
67	ER4f	ExonRegion	1	8.47	32.54	18.38	33.62	24.97	58.68	47.66	25.93	43.23	46.64	50.26	8.66	23.45	63.34	27.08	107.00	64.92	245.75	89.19	46.10	38.93	18.75	57.75
68	ER4g	ExonRegion	0	10.51	24.12	21.56	44.34	20.26	40.23	30.21	36.51	41.94	41.11	47.51	6.91	22.26	74.71	25.98	86.92	64.19	298.61	99.25	55.97	56.95	17.13	42.35
69	E4_Dd	NovelBoundary	0	7.56	0.00	10.08	9.42	4.33	0.00	1.81	3.82	4.48	9.43	4.79	7.65	0.00	11.54	4.45	3.67	17.77	38.22	16.19	2.68	17.17	2.51	7.68
70	E4d_E5a	KnownJunction	0	16.82	36.51	18.07	47.91	27.33	60.31	20.71	42.59	40.60	43.62	42.22	12.45	53.57	60.33	50.93	77.84	89.11	289.97	144.57	68.26	58.50	9.37	43.36
71	ER5a	ExonRegion	0	7.29	12.84	15.19	28.41	22.00	40.98	43.06	26.67	23.27	36.09	32.86	8.16	34.51	54.48	39.00	65.82	55.35	189.05	89.66	53.89	52.77	16.58	55.64
72	E5_Da	NovelBoundary	1	19.56	18.09	12.18	47.18	15.79	51.67	41.07	17.66	38.02	17.41	50.54	6.30	13.31	51.33	5.56	91.51	39.36	195.08	66.07	24.54	71.54	13.59	34.23
73	E5a_E6a	KnownJunction	0	0.00	22.89	9.46	12.19	7.72	32.71	34.58	18.20	11.78	31.37	19.85	0.00	19.97	33.37	14.09	37.26	46.56	120.34	41.70	48.58	23.23	5.02	31.67
74	I5	Intron	1	7.34	13.06	17.74	27.83	10.21	14.31	26.18	18.32	17.24	11.56	25.15	9.32	15.89	34.39	7.87	28.87	34.93	96.22	50.28	21.78	34.77	13.73	22.92
75	I5_SR1	SilentIntronRegion	1	7.39	13.15	17.86	28.02	10.28	14.41	26.36	18.44	17.36	11.64	25.32	9.39	16.00	34.62	7.93	29.07	35.17	96.87	50.62	21.93	35.01	13.82	23.08
76	E6_Aa	NovelBoundary	0	14.30	19.34	24.27	33.36	19.78	12.38	34.89	26.41	21.41	21.41	34.38	27.16	27.92	38.55	13.35	23.07	52.55	103.09	29.65	14.00	27.92	25.84	24.33
77	ER6a	ExonRegion	0	14.45	42.51	24.91	46.76	26.55	65.47	84.15	39.50	38.57	47.78	48.75	19.30	28.07	85.37	35.91	55.72	65.58	177.49	103.19	71.30	48.00	24.17	38.78
78	E6_Da	KnownBoundary	0	0.00	0.00	5.94	12.42	3.99	2.61	19.08	8.79	8.62	12.60	7.74	0.00	0.00	4.53	0.00	4.27	8.88	20.10	22.02	11.63	8.03	0.00	14.77
79	E6a_E7a	KnownJunction	0	16.23	68.94	25.34	35.93	28.27	35.21	103.61	40.50	48.47	52.17	61.59	42.46	42.69	80.41	35.73	61.61	120.24	201.92	121.51	92.49	64.62	24.86	31.93
80	ER6b	ExonRegion	0	4.66	7.98	5.93	9.37	3.15	7.59	17.26	5.90	3.08	4.54	2.15	3.92	4.23	4.45	10.10	6.71	11.53	21.74	18.21	7.32	3.92	2.95	5.24
81	E6_Db	NovelBoundary	0	39.34	37.43	37.25	31.83	42.53	21.18	62.53	59.93	41.96	42.74	22.90	0.00	0.00	5.77	11.50	28.37	17.02	46.47	29.74	42.19	40.53	2.88	22.79
82	ER6c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.33	4.69	1.62	4.35	1.49	0.00	0.92	1.59	2.13	0.00	0.00	0.00
83	E7_Aa	NovelBoundary	0	0.00	6.71	7.27	16.75	7.39	5.79	15.63	0.00	9.95	1.67	4.90	6.30	0.00	7.30	0.00	0.00	12.53	31.46	7.15	2.88	17.92	0.00	4.35
84	ER7a	ExonRegion	0	11.08	34.79	36.15	51.52	31.84	58.42	81.51	54.89	47.36	54.88	63.05	37.41	45.42	88.81	43.75	89.78	78.86	233.23	103.85	86.22	58.53	28.06	46.19
85	E7a_E8a	KnownJunction	0	23.93	47.69	57.01	62.86	61.29	73.03	79.67	75.49	66.78	67.24	77.18	66.77	93.18	113.90	42.28	59.30	106.03	207.60	110.69	97.28	69.50	17.45	62.83
86	I7_SR1	SilentIntronRegion	0	3.03	3.69	6.25	9.35	5.28	0.90	10.45	4.14	2.68	1.31	7.64	2.96	5.95	3.17	2.33	4.98	7.14	12.48	13.77	5.64	7.53	5.02	5.63
87	ER8a	ExonRegion	0	36.74	116.10	50.77	91.61	71.18	94.64	106.82	73.97	49.99	53.62	49.34	36.04	47.96	62.76	37.95	65.87	57.69	157.92	86.33	52.72	41.26	31.67	40.73
88	E8_Da	KnownBoundary	0	80.61	118.79	10.26	33.30	45.67	36.29	56.57	28.34	12.76	10.91	7.48	18.46	7.47	9.77	0.00	14.95	16.08	28.06	12.99	15.60	0.00	8.02	11.35
89	ER8b	ExonRegion	1	83.95	104.48	65.59	100.53	86.85	77.71	88.57	72.66	42.08	38.16	24.70	32.14	53.46	26.72	33.68	30.80	31.69	56.87	41.25	22.60	15.51	19.06	22.41