Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HIGD1A Gene 0 112.49 121.92 72.84 66.88 86.07 124.16 120.91 50.09 41.04 35.39 161.23 124.69 63.14 154.54 157.88 108.31 120.59 42.26 120.48 72.61 80.18 124.24 81.27 2 321331 Transcript 0 1.51 2.32 0.00 1.27 2.87 1.96 3.03 0.00 0.53 0.00 2.76 0.00 0.00 0.00 1.04 0.00 0.71 0.66 0.00 1.06 4.88 0.74 0.84 3 431549 Transcript 0 0.85 0.12 0.09 0.11 0.00 0.95 0.94 0.00 0.31 0.10 0.01 0.00 0.00 0.87 0.58 0.02 0.01 0.20 0.01 0.36 0.82 0.00 0.00 4 430190 Transcript 0 8.59 13.22 7.68 6.33 25.73 39.10 34.73 5.13 4.18 5.50 16.94 17.83 15.00 9.46 13.91 8.30 10.97 4.18 6.93 8.45 9.01 11.89 4.15 5 470543 Transcript 0 25.71 12.17 25.31 17.98 33.70 19.36 6.40 6.90 7.90 4.00 29.27 6.30 8.12 17.13 24.11 15.81 17.86 0.00 18.26 12.91 51.71 10.96 20.06 6 418900 Transcript 0 26.18 42.38 15.78 10.52 30.17 46.05 31.15 5.91 4.32 9.11 37.28 2.86 8.54 64.91 43.04 37.21 27.85 12.57 52.36 13.23 21.47 43.93 35.46 7 452906 Transcript 0 9.51 8.05 9.05 7.31 7.54 7.43 9.14 6.13 4.44 4.80 3.17 9.22 6.21 6.99 8.16 5.28 4.80 3.07 9.93 8.18 3.16 8.14 5.78 8 450099 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 1.51 2.32 0.00 1.27 2.87 1.96 3.03 0.00 0.53 0.00 2.76 0.00 0.00 0.00 1.04 0.00 0.71 0.66 0.00 1.06 4.88 0.74 0.84 10 E1_Ac KnownBoundary 0 7.41 16.77 0.00 2.06 7.98 8.46 17.97 0.00 0.00 0.00 10.42 0.00 0.00 0.00 0.00 0.00 9.35 4.15 0.00 3.13 18.41 3.12 4.35 11 E1_Ad KnownBoundary 1 69.79 143.20 19.63 34.83 73.43 147.47 97.95 24.27 26.24 10.10 174.47 0.00 109.25 16.48 47.96 88.78 256.29 43.98 42.17 59.76 142.34 51.19 78.19 12 ER1b ExonRegion 1 43.84 78.15 14.70 21.71 66.99 113.50 87.67 8.15 14.73 4.67 146.56 0.77 104.02 39.33 44.04 47.34 205.95 29.63 47.44 44.45 158.35 37.58 72.26 13 ER1c ExonRegion 1 107.94 207.43 42.89 39.52 139.14 262.23 182.71 22.47 28.41 9.18 328.59 4.33 218.09 71.46 110.25 126.32 396.11 64.67 82.82 100.00 307.42 83.34 162.98 14 ER1d ExonRegion 1 490.76 801.85 182.63 157.83 566.27 889.15 640.74 111.07 92.88 68.54 850.06 65.88 253.47 1150.72 1005.85 849.83 709.48 213.98 717.19 339.50 669.11 506.34 734.16 15 E1_Ae NovelBoundary 1 368.29 613.97 89.29 68.29 350.76 647.01 460.00 55.53 33.91 37.39 442.85 27.46 18.18 532.29 624.02 556.95 332.12 96.05 343.82 247.93 443.50 323.99 485.12 16 E1a_E2a KnownJunction 0 7.48 16.51 6.50 3.26 8.32 19.48 5.79 0.00 0.00 6.34 12.16 0.00 0.00 9.18 8.90 0.00 8.70 4.23 13.74 0.00 6.18 23.02 8.54 17 E1a_E2b KnownJunction 1 1482.41 1988.72 450.93 384.03 1460.70 1959.95 1712.98 290.27 225.84 172.80 1559.71 216.67 464.26 3588.05 2328.83 2299.99 1087.61 443.76 2455.04 764.39 920.73 1454.48 1754.04 18 E1a_E3a KnownJunction 0 25.71 12.17 25.31 17.98 33.70 19.36 6.40 6.90 7.90 4.00 29.27 6.30 8.12 17.13 24.11 15.81 17.86 0.00 18.26 12.91 51.71 10.96 20.06 19 ER1e ExonRegion 1 923.15 1387.92 372.72 317.78 1030.61 1493.63 1151.63 223.55 183.83 132.09 1262.18 156.58 328.30 2787.26 1874.21 1688.66 891.79 403.43 1748.76 569.15 824.92 1106.35 1336.17 20 ER1f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER1g ExonRegion 0 1.17 3.10 2.81 1.97 3.54 5.59 5.65 2.24 3.52 3.66 6.70 0.70 4.60 10.88 10.73 4.65 16.59 7.79 12.47 7.96 6.43 3.78 1.72 22 E1b_E2b KnownJunction 0 0.00 6.38 4.32 5.53 12.05 8.69 3.49 2.55 6.25 0.00 11.95 5.40 0.00 16.95 30.53 0.00 21.60 7.92 18.64 4.99 11.86 16.41 0.00 23 I1_AR3 ActiveIntronRegion 0 0.00 8.76 7.76 19.89 13.00 10.57 36.28 5.60 1.88 5.38 5.02 17.94 4.58 2.51 6.42 3.33 3.30 1.85 1.97 9.52 0.00 0.10 3.43 24 ER2a ExonRegion 1 44.87 68.25 25.05 17.77 52.02 72.62 56.51 11.82 8.65 11.88 62.39 5.71 17.07 120.64 77.17 74.42 47.00 20.92 90.97 26.47 36.76 64.84 62.37 25 ER2b ExonRegion 1 318.30 444.13 315.68 243.66 337.44 460.91 442.44 196.49 165.71 124.78 859.89 187.27 178.78 586.21 438.48 458.19 752.80 235.64 615.02 280.85 594.55 430.60 326.86 26 E2a_E3a KnownJunction 1 104.61 107.15 540.31 370.65 101.78 63.60 91.81 303.74 253.41 208.64 1774.66 223.42 160.70 419.21 463.44 152.18 1145.02 238.48 302.60 464.81 1053.61 385.34 178.41 27 ER3a ExonRegion 0 171.38 213.28 349.94 301.87 318.57 461.56 335.24 246.90 188.62 161.37 822.47 491.31 340.95 1312.90 1033.58 931.40 638.76 315.77 992.58 430.35 473.37 815.64 698.53 28 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E3a_E4b KnownJunction 0 173.07 427.88 224.18 215.26 1104.16 1530.71 1228.56 200.69 150.98 144.71 567.41 668.17 224.99 380.54 479.39 245.49 388.50 123.66 249.04 241.54 247.60 395.14 145.97 30 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.21 2.25 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 31 ER4a ExonRegion 0 17.18 26.44 15.35 12.67 51.47 78.21 69.47 10.27 8.36 9.65 33.88 35.65 23.17 18.92 27.82 16.61 21.94 8.37 13.87 16.90 18.02 23.78 8.29 32 ER4b ExonRegion 0 344.12 830.45 258.37 234.06 538.42 945.78 936.47 182.81 146.62 130.31 672.79 639.81 225.40 379.06 520.18 258.49 452.71 120.65 300.50 244.81 342.42 409.78 189.15 33 E4_Da KnownBoundary 1 667.82 1285.89 361.31 386.16 333.19 633.33 633.12 253.92 206.19 198.86 880.12 856.48 300.95 538.06 634.65 277.36 602.43 148.65 365.85 351.67 504.78 536.65 193.35 34 ER4c ExonRegion 0 374.46 399.13 229.05 244.89 200.38 296.22 311.00 177.61 156.58 135.00 566.58 535.61 198.83 367.02 497.18 238.02 345.71 92.81 242.29 225.97 153.50 427.86 156.66 35 E4_Db KnownBoundary 1 405.33 315.86 91.07 130.59 261.88 357.52 386.73 58.90 52.40 42.68 66.28 438.74 106.00 139.44 277.89 229.60 26.74 73.75 177.79 59.70 13.65 162.94 117.89 36 ER4d ExonRegion 0 210.02 121.20 10.27 13.03 60.55 103.77 131.79 6.88 3.98 2.45 0.35 58.11 20.85 5.52 14.62 14.96 0.03 7.77 9.47 3.01 1.33 8.53 11.44 37 E4_Dc KnownBoundary 1 14.97 9.14 90.98 116.07 0.00 10.73 4.28 46.45 17.71 22.56 11.48 551.13 153.07 37.79 142.16 57.59 4.11 14.05 56.47 14.51 7.78 72.81 40.21 38 ER4e ExonRegion 1 66.08 33.47 82.44 65.88 45.61 32.65 42.03 47.37 25.18 23.93 68.78 150.76 40.15 57.86 118.03 22.67 45.64 8.04 30.36 30.02 12.84 66.72 13.17 39 E4_Dd KnownBoundary 1 788.81 298.24 212.41 177.90 548.81 333.90 468.39 126.75 70.63 78.17 259.43 943.36 402.41 299.37 645.90 104.16 188.78 31.26 125.74 112.62 39.97 259.26 75.89 40 ER4f ExonRegion 1 305.51 119.92 90.75 91.53 223.01 141.37 199.38 58.12 34.20 32.29 123.83 472.18 208.71 146.07 320.41 48.76 88.51 19.81 64.01 56.91 19.70 99.49 35.70 41 E4_De KnownBoundary 0 14.74 6.38 4.94 12.59 24.02 14.48 35.55 8.75 7.00 3.63 0.00 42.91 14.12 14.30 4.82 4.36 0.00 4.10 8.38 15.02 0.00 17.39 0.00 42 ER4g ExonRegion 0 19.03 16.09 18.09 14.62 15.09 14.85 18.28 10.54 8.88 9.59 6.33 18.45 12.43 13.97 16.32 10.57 9.60 6.15 19.87 16.36 6.32 16.27 11.56 43 ER5a ExonRegion 0 1.05 0.48 0.36 0.46 0.01 1.58 0.22 0.00 1.22 0.38 0.03 0.02 0.00 1.00 2.30 0.08 0.03 0.80 0.03 1.43 0.26 0.01 0.00 44 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER6a ExonRegion 0 2.34 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00