Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF35 Gene 0 32.44 38.53 26.03 31.09 39.12 35.48 62.18 23.86 17.22 42.98 69.54 38.41 32.20 56.59 41.83 54.49 59.38 60.19 35.35 28.34 20.96 32.26 27.99 2 396056 Transcript 0 2.95 22.38 11.53 7.21 7.69 20.62 17.36 9.14 3.10 16.39 8.87 15.30 0.00 9.14 9.60 7.52 16.60 18.69 4.56 12.18 12.96 6.92 6.40 3 432115 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 415571 Transcript 0 1.37 4.64 0.00 0.00 2.16 0.00 0.00 0.00 0.65 0.00 0.00 0.00 3.41 1.50 2.23 0.00 4.63 0.00 0.00 3.07 0.00 0.00 2.09 5 399560 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 296092 Transcript 0 2.12 2.03 0.00 0.00 1.34 0.92 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.81 2.90 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 7 453164 Transcript 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 3.04 2.15 2.58 0.00 0.00 0.00 0.00 0.00 0.00 6.51 0.00 0.00 2.41 0.00 3.33 8 ER1a ExonRegion 0 2.12 1.08 0.08 0.00 0.36 0.12 1.32 0.00 0.00 0.92 0.52 0.00 0.00 0.87 0.77 0.00 0.66 0.62 0.00 0.14 0.59 0.00 0.00 9 ER1b ExonRegion 0 2.12 6.10 1.23 1.36 5.35 1.83 6.62 0.00 0.00 3.44 3.87 0.00 0.00 1.62 5.80 0.00 3.30 5.54 0.00 2.13 2.20 0.00 0.00 10 ER1c ExonRegion 0 2.12 9.49 1.23 2.73 5.35 3.67 10.59 0.58 0.00 5.35 7.73 0.00 0.00 3.79 5.80 5.94 9.90 11.70 6.37 3.55 2.20 0.00 0.98 11 ER1d ExonRegion 1 21.00 40.61 7.07 7.45 11.43 34.79 77.05 6.73 5.58 17.33 61.30 5.12 3.20 36.54 18.07 71.60 70.57 88.69 37.40 14.60 23.67 20.08 41.60 12 E1_Da NovelBoundary 0 10.67 27.56 7.98 7.86 4.16 10.11 8.08 12.82 9.20 11.93 14.58 0.00 0.00 5.18 10.38 16.15 4.02 96.42 14.40 6.26 11.43 3.12 35.94 13 E1a_E2a KnownJunction 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 3.04 2.15 2.58 0.00 0.00 0.00 0.00 0.00 0.00 6.51 0.00 0.00 2.41 0.00 3.33 14 E1a_E2b KnownJunction 0 3.63 0.00 0.00 4.03 0.00 0.00 0.00 0.00 0.00 4.08 2.58 0.00 0.00 0.00 0.00 0.00 4.68 4.31 0.00 0.00 0.00 0.00 0.00 15 E1_Db NovelBoundary 0 0.00 0.00 3.13 6.99 0.00 7.67 4.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 14.30 13.27 6.14 0.00 0.00 0.00 16 E1b_E2a KnownJunction 0 10.82 9.67 0.00 3.73 0.00 30.61 17.67 3.24 6.45 7.06 11.85 0.00 6.82 2.35 15.08 12.39 4.77 17.37 13.46 3.26 5.81 0.00 3.67 17 E1b_E2b KnownJunction 0 2.74 9.27 0.00 0.00 4.33 0.00 0.00 0.00 1.30 0.00 0.00 0.00 6.82 3.00 4.45 0.00 9.26 0.00 0.00 6.14 0.00 0.00 4.18 18 ER1e ExonRegion 0 8.56 17.59 6.39 6.16 4.77 24.16 14.05 7.59 10.04 13.41 15.88 0.00 8.36 4.80 15.52 18.61 12.63 81.54 17.59 7.86 11.59 2.36 21.19 19 ER2a ExonRegion 1 4.23 8.64 1.53 5.79 1.34 21.09 16.88 3.89 11.12 12.90 18.85 0.00 5.86 3.25 15.23 9.66 11.55 51.28 7.17 3.72 10.47 0.52 5.87 20 ER2b ExonRegion 0 5.72 24.32 13.56 20.45 17.37 21.05 34.22 9.45 12.90 24.75 52.40 13.81 8.81 39.09 19.38 30.92 43.55 56.00 22.67 19.43 26.09 16.23 22.44 21 E2a_E3a KnownJunction 0 2.74 33.55 7.16 7.99 25.47 39.41 30.07 2.51 7.67 12.11 33.53 12.00 6.82 26.49 13.35 51.10 33.47 17.99 18.26 18.02 11.12 0.00 11.69 22 E2a_E4a KnownJunction 0 16.00 6.64 4.61 1.60 3.65 10.11 7.99 10.02 6.45 11.50 32.17 18.16 0.00 29.14 14.22 0.00 24.12 12.68 9.32 16.87 7.85 20.51 15.62 23 ER3a ExonRegion 0 3.34 29.45 14.64 13.46 10.20 14.86 18.61 4.57 7.85 19.19 19.29 18.42 7.86 24.36 14.55 14.00 29.46 33.45 28.40 18.30 12.84 8.82 8.75 24 E3a_E4a KnownJunction 0 3.78 43.68 22.97 14.42 15.03 41.11 33.39 18.28 6.19 31.86 17.21 30.61 0.00 17.42 18.42 15.04 32.54 36.77 9.13 24.22 25.33 13.84 12.80 25 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.92 2.65 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 3.30 1.85 0.00 0.00 0.00 2.08 0.00 27 ER4a ExonRegion 0 19.47 31.57 21.00 26.29 28.24 27.17 36.40 23.80 14.76 45.86 65.69 39.70 31.17 50.50 20.04 43.48 56.67 38.89 10.88 30.80 24.58 29.71 24.62 28 E4_Da KnownBoundary 0 15.93 39.01 17.92 37.96 35.23 18.51 60.28 15.48 23.58 35.54 63.49 32.86 33.11 52.21 28.68 48.11 40.86 37.06 12.80 29.85 11.24 40.17 22.19 29 ER4b ExonRegion 1 19.99 43.07 24.97 32.75 37.01 19.15 62.54 28.92 13.17 42.06 56.81 35.06 35.24 60.34 17.90 50.03 50.36 57.00 28.61 35.77 12.83 33.47 22.14 30 E4_Db KnownBoundary 1 17.56 40.91 21.17 28.67 26.57 13.46 64.30 38.90 8.65 33.04 51.91 54.32 34.09 44.09 0.00 30.93 21.69 41.29 22.31 25.89 16.68 40.17 10.16 31 E4_Dc KnownBoundary 0 17.26 47.49 6.65 30.50 21.05 16.24 63.95 20.74 17.42 35.91 78.86 36.31 40.58 23.13 23.73 50.16 35.81 37.60 22.12 34.52 11.49 11.27 25.78 32 ER4c ExonRegion 0 23.78 52.63 20.54 35.03 30.69 20.93 71.26 42.40 18.82 47.56 87.44 45.84 46.35 49.11 23.04 52.62 43.11 62.71 26.23 37.67 15.04 32.48 23.84 33 ER4d ExonRegion 0 41.50 42.11 30.53 35.79 47.45 41.46 71.83 28.39 19.69 49.56 78.84 46.29 39.43 64.14 51.69 62.76 66.05 63.31 39.94 31.09 21.42 37.97 30.88 34 ER4e ExonRegion 0 2.12 2.03 0.00 0.00 1.34 0.92 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.81 2.90 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00