Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DUSP7 Gene 0 13.49 22.05 25.61 15.66 11.09 12.02 19.48 19.47 17.50 22.01 32.03 12.71 25.89 56.52 18.49 26.25 48.79 23.49 14.59 16.70 72.83 47.09 51.13 2 495880 Transcript 0 9.80 15.12 7.28 6.12 5.71 5.01 8.64 4.49 5.41 5.74 10.27 4.53 10.20 15.96 6.39 10.68 15.82 5.72 6.07 4.18 18.69 20.42 18.36 3 296483 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 469623 Transcript 0 2.20 3.51 9.54 3.47 2.01 3.97 4.39 5.30 4.40 4.48 4.74 1.36 0.85 8.43 2.66 3.94 6.67 3.70 3.89 3.90 5.70 5.20 5.77 5 451414 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 IG41_SR8 SilentIntergenicRegion 0 2.88 7.78 12.86 0.51 4.96 3.38 5.30 3.96 3.01 9.82 0.78 5.77 0.00 6.66 0.00 6.50 2.10 21.21 3.00 6.75 0.57 0.88 4.47 7 IG41_AR7 ActiveIntergenicRegion 0 2.12 10.17 19.61 2.73 5.35 5.50 9.71 11.23 7.41 13.76 5.80 8.66 0.00 3.25 0.00 0.00 6.60 44.04 6.37 17.02 2.20 2.78 8.81 8 IG41_SR7 SilentIntergenicRegion 0 1.64 6.06 6.97 2.86 3.74 4.52 5.81 11.56 2.40 7.95 3.71 0.82 1.55 4.50 4.83 5.52 1.77 30.83 3.58 11.92 1.70 1.95 2.52 9 IG41_SR6 SilentIntergenicRegion 0 1.50 4.69 10.79 4.41 3.48 4.31 6.03 8.13 2.51 8.63 2.42 0.97 1.45 3.74 3.74 3.17 1.81 16.77 1.42 11.84 0.00 0.00 1.57 10 IG41_AR5 ActiveIntergenicRegion 0 2.53 7.09 10.38 6.22 2.22 2.19 6.66 7.83 2.71 6.68 3.65 1.97 1.78 5.73 1.80 4.27 2.12 21.94 1.76 12.78 0.61 1.53 2.43 11 ER1a ExonRegion 0 0.32 1.85 1.81 1.23 0.00 1.13 0.78 1.47 2.65 3.01 9.37 2.73 7.28 15.56 3.97 9.83 10.35 6.28 4.01 3.92 24.88 9.88 16.90 12 E1_Ab KnownBoundary 0 0.00 12.17 15.43 15.45 0.00 0.00 5.87 22.71 24.91 40.16 58.86 13.20 32.30 122.84 48.58 64.77 87.05 30.47 22.21 26.21 124.48 87.56 80.84 13 ER1b ExonRegion 1 0.22 2.12 6.84 2.30 2.40 6.84 4.52 6.37 6.64 20.43 56.70 3.43 26.97 62.02 16.02 23.90 122.13 4.81 15.33 13.61 173.96 51.09 41.60 14 E1_Ac KnownBoundary 1 3.11 2.83 13.10 0.00 3.40 5.34 4.46 10.80 12.88 31.43 48.80 12.15 35.71 60.63 9.27 30.59 120.90 5.93 4.80 17.96 171.19 47.82 31.33 15 ER1c ExonRegion 0 1.37 3.81 19.08 8.58 3.77 3.33 11.93 22.33 20.41 38.32 61.55 15.65 30.38 93.98 15.10 33.94 86.01 32.06 11.73 23.91 142.69 51.21 62.94 16 E1_Ad KnownBoundary 0 6.22 8.75 42.96 23.41 12.73 5.11 32.28 44.28 36.63 72.23 71.44 24.91 33.60 143.03 26.70 48.02 116.13 69.43 35.30 35.79 181.87 83.09 117.37 17 ER1d ExonRegion 0 5.34 14.13 34.72 17.65 6.40 15.20 19.64 30.14 30.55 52.65 94.17 23.80 70.33 158.78 43.11 64.84 112.35 46.36 31.62 35.04 221.18 101.35 116.50 18 E1a_E2a KnownJunction 0 6.00 18.42 76.17 42.55 55.52 29.02 27.87 63.09 66.75 78.62 119.35 51.02 91.07 233.51 65.27 137.40 128.85 111.84 38.59 42.44 356.21 169.43 286.56 19 ER2a ExonRegion 0 19.85 32.44 95.38 47.95 23.74 37.13 49.67 88.96 75.57 93.82 155.62 66.77 139.97 263.46 82.04 133.34 229.53 131.14 73.96 75.19 365.89 194.71 248.40 20 E2_Da KnownBoundary 0 0.00 0.00 3.99 5.13 6.54 0.00 0.00 4.64 4.72 2.55 7.00 0.00 0.00 7.12 0.00 0.00 4.77 3.81 8.75 0.00 0.00 0.00 3.33 21 E2a_E3a KnownJunction 0 13.93 39.99 110.46 43.12 31.24 42.76 50.88 107.00 62.12 94.18 142.40 105.63 194.47 212.14 42.90 87.50 229.55 123.24 51.11 52.67 384.87 101.34 138.89 22 ER2b ExonRegion 0 2.20 3.51 9.54 3.47 2.01 3.97 4.39 5.30 4.40 4.48 4.74 1.36 0.85 8.43 2.66 3.94 6.67 3.70 3.89 3.90 5.70 5.20 5.77 23 E2_Db NovelBoundary 0 3.48 3.35 13.57 5.63 3.65 10.33 5.96 6.57 5.01 4.00 2.58 0.00 0.00 17.07 4.45 0.00 8.70 3.86 4.80 2.62 5.99 8.02 8.71 24 E3_Aa NovelBoundary 0 12.30 11.12 14.37 6.93 11.46 2.33 5.39 11.46 4.05 4.81 7.37 0.00 0.00 14.07 5.07 6.66 4.58 6.80 3.76 7.48 6.12 5.33 27.57 25 ER3a ExonRegion 0 44.52 76.69 70.58 51.88 39.44 34.11 65.36 52.23 46.06 59.03 72.32 30.52 56.78 147.73 49.58 57.21 117.84 59.60 25.83 46.30 192.05 123.13 134.13 26 E3_Da KnownBoundary 0 27.78 128.07 47.07 39.09 54.92 35.83 49.90 24.81 19.97 30.97 27.69 11.10 31.82 101.07 19.41 44.35 40.95 2.03 38.50 23.46 27.12 105.26 38.58 27 ER3b ExonRegion 0 19.28 28.40 12.76 11.02 11.43 8.90 16.50 7.51 8.18 8.47 11.17 6.34 13.11 16.36 8.80 11.53 21.29 5.16 8.13 4.44 12.51 30.96 19.82 28 IG40_AR11 ActiveIntergenicRegion 0 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.39 0.00 0.16 21.22 0.02 0.85 0.57 0.59 0.00 0.78 29 IG40_SR6 SilentIntergenicRegion 0 0.02 0.02 0.50 0.09 0.06 0.00 0.05 0.10 0.09 0.18 0.03 0.10 0.00 6.79 0.43 0.59 23.67 0.07 0.04 0.11 0.03 0.01 0.09 30 IG40_AR1 ActiveIntergenicRegion 0 0.00 1.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.47 0.00 0.00 13.07 22.30 0.00 2.51 0.88 7.08 0.00 4.90 0.00 0.00