Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRRC2 Gene 0 9.60 28.10 25.76 32.57 12.43 7.85 10.25 12.53 17.78 2.95 1.44 9.09 7.58 4.73 7.61 6.93 3.98 4.34 4.39 15.40 5.10 5.75 7.35 2 296144 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 395905 Transcript 0 5.38 17.26 18.22 22.04 8.08 4.31 6.12 8.53 10.68 1.71 0.83 4.97 4.12 2.71 4.63 3.76 1.90 2.55 2.47 10.21 3.37 3.31 4.53 4 496388 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 469912 Transcript 0 0.90 2.65 3.46 1.95 0.00 0.00 0.94 1.82 2.71 0.00 0.00 0.00 0.55 0.00 0.00 0.42 1.41 1.49 1.36 2.12 0.00 0.89 0.83 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.99 0.41 0.00 0.00 9 ER2b ExonRegion 0 0.45 3.76 0.99 2.72 0.78 1.52 1.11 0.64 0.72 0.12 0.00 0.00 0.00 0.97 0.00 0.73 0.00 0.87 0.00 4.71 1.29 0.55 0.87 10 E2_Ac KnownBoundary 0 2.96 34.73 15.11 13.22 7.72 29.93 12.98 2.55 14.99 1.64 0.00 0.00 0.00 7.36 0.00 7.95 0.00 6.09 0.00 17.45 3.15 3.12 4.10 11 ER2c ExonRegion 0 2.97 24.33 11.31 8.25 0.84 11.97 8.55 1.33 7.39 0.91 0.00 1.75 0.00 1.05 0.00 1.62 0.00 5.61 0.00 15.27 2.67 2.78 0.82 12 E2a_E3a KnownJunction 0 3.19 3.16 6.62 11.32 0.00 0.00 0.00 0.00 4.20 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 7.25 0.00 14.70 2.59 0.00 0.00 13 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 0.93 4.07 16.16 15.54 2.90 1.96 0.20 2.34 12.76 0.61 0.00 0.57 0.00 2.84 0.73 2.11 0.21 3.72 0.00 18.28 2.34 3.34 3.34 15 E3_Da KnownBoundary 0 0.00 2.63 6.21 1.53 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 6.12 21.35 21.88 0.00 10.73 2.25 8.46 7.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.74 13.56 0.00 37.52 5.93 3.12 3.59 17 ER3b ExonRegion 0 0.90 2.65 3.46 1.95 0.00 0.00 0.94 1.82 2.71 0.00 0.00 0.00 0.55 0.00 0.00 0.42 1.41 1.49 1.36 2.12 0.00 0.89 0.83 18 ER4a ExonRegion 0 0.00 6.14 13.23 19.68 9.20 10.86 7.03 6.68 13.72 1.19 0.00 1.60 0.00 1.32 0.00 0.49 1.35 7.57 0.00 18.55 3.27 2.02 4.53 19 E4_Da KnownBoundary 0 0.00 23.35 26.97 25.70 0.00 7.89 0.00 11.30 16.12 2.87 0.00 0.00 0.00 0.00 0.00 4.10 0.00 1.95 0.00 8.31 5.62 9.37 4.10 20 ER4b ExonRegion 0 4.11 23.74 20.11 20.47 5.91 11.60 6.00 13.27 23.23 2.24 0.00 8.95 3.75 2.75 0.00 1.08 4.46 1.06 0.73 15.97 4.28 2.54 3.83 21 E4b_E5a KnownJunction 0 0.00 19.60 1.42 11.55 11.21 8.18 3.89 9.78 26.16 2.79 0.00 0.00 0.00 4.53 0.00 0.00 3.93 0.00 4.80 13.61 2.59 0.00 0.00 22 ER5a ExonRegion 0 2.72 10.93 16.20 24.58 9.54 5.15 5.69 14.84 25.27 2.90 1.16 5.65 3.61 2.89 0.00 2.01 2.38 0.00 2.80 16.05 3.44 2.34 3.35 23 E5a_E6a KnownJunction 0 3.56 12.37 16.35 28.80 11.71 8.18 1.99 15.40 21.87 8.52 2.05 6.30 13.64 2.12 0.00 3.33 0.00 0.00 3.76 10.74 2.97 3.12 4.35 24 ER6a ExonRegion 0 4.00 10.45 12.90 32.10 10.29 9.80 4.78 11.00 20.84 4.99 0.11 9.16 1.61 1.59 0.00 3.15 0.00 4.09 3.35 13.46 1.98 2.86 2.38 25 E6a_E7a KnownJunction 0 5.93 8.68 15.55 30.13 8.66 0.00 4.02 9.08 20.28 6.31 0.00 23.86 0.00 0.00 0.00 0.00 0.00 6.47 0.00 8.37 0.00 5.45 3.93 26 ER7a ExonRegion 0 5.89 13.96 18.30 30.65 5.72 1.67 10.08 8.45 19.04 3.83 0.00 9.01 5.72 2.70 0.00 3.93 0.00 4.16 1.31 9.72 1.89 4.62 3.74 27 E7a_E8a KnownJunction 0 0.00 15.72 21.38 25.20 7.72 2.90 4.20 11.17 12.47 1.67 0.00 39.76 0.00 6.36 0.00 3.59 0.00 4.44 3.76 6.26 3.15 3.12 7.34 28 E8_Aa NovelBoundary 0 7.33 31.70 20.16 25.84 15.03 7.33 8.44 4.11 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.60 0.00 0.00 0.00 29 ER8a ExonRegion 0 4.36 22.46 21.10 37.44 9.18 6.61 4.02 8.72 22.00 3.76 0.00 13.38 4.03 4.97 0.00 6.57 2.48 7.38 4.94 10.54 4.22 3.73 5.44 30 E8_Da NovelBoundary 0 11.11 13.02 17.47 13.45 3.57 0.00 1.72 5.09 9.64 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.24 0.00 9.33 3.15 0.00 0.00 31 E8a_E9a KnownJunction 0 10.89 18.02 11.47 24.87 22.24 13.40 3.93 4.23 16.58 4.16 0.00 6.30 0.00 0.00 0.00 7.26 4.30 2.57 0.00 6.33 5.75 2.57 0.00 32 I8 Intron 0 2.56 11.30 17.59 27.79 4.78 1.82 3.21 4.64 6.31 0.76 0.00 1.21 0.38 0.29 0.06 0.53 0.39 1.28 1.08 4.75 0.75 0.86 0.69 33 I8_SR1 SilentIntronRegion 0 2.57 11.31 17.60 27.81 4.79 1.82 3.21 4.65 6.31 0.76 0.00 1.21 0.38 0.29 0.06 0.53 0.39 1.28 1.08 4.75 0.75 0.86 0.69 34 E9_Aa NovelBoundary 0 3.70 2.43 17.59 29.83 4.33 2.84 0.00 2.05 4.54 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.07 0.00 5.57 0.00 35 ER9a ExonRegion 0 9.73 20.44 24.75 48.64 18.26 6.60 8.14 7.96 23.16 3.01 0.00 6.07 1.44 2.06 0.00 2.41 2.67 1.25 1.28 13.26 2.20 5.32 4.61 36 E9a_E10a KnownJunction 0 31.56 67.29 28.56 84.77 37.52 8.29 33.34 18.07 20.43 5.26 0.00 6.30 0.00 0.00 0.00 3.85 4.77 4.35 0.00 23.20 0.00 8.76 3.59 37 ER10a ExonRegion 0 24.38 53.61 23.10 30.56 17.67 15.17 20.25 13.53 19.56 4.66 4.28 20.05 21.64 10.40 21.84 18.73 12.60 6.22 10.67 23.88 8.98 12.06 13.99 38 E10_Da KnownBoundary 0 10.00 63.02 10.29 16.25 6.37 2.27 2.25 2.14 16.96 2.26 0.00 0.00 0.00 9.18 0.00 0.00 0.00 0.00 0.00 9.14 0.00 0.00 0.00 39 ER10b ExonRegion 0 10.77 34.52 36.45 43.63 16.16 8.63 12.24 17.05 21.36 3.42 1.65 9.95 8.23 5.42 9.26 7.51 3.80 5.09 4.94 17.42 6.34 6.61 9.06