Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNRK Gene 0 95.83 165.25 74.72 131.35 130.55 124.23 88.44 112.71 117.33 59.65 31.52 59.43 45.35 41.25 27.58 32.62 33.46 94.69 52.66 135.02 24.44 49.86 28.55 2 454177 Transcript 0 0.00 3.00 0.00 3.97 1.48 2.27 0.67 4.81 5.65 1.72 0.00 0.00 0.00 2.08 0.00 0.00 0.87 4.27 0.11 11.04 0.57 0.04 0.46 3 429705 Transcript 0 7.83 5.06 3.72 8.82 11.51 7.23 1.46 8.22 7.71 5.31 1.35 3.03 1.88 0.81 1.45 0.00 0.00 6.67 0.00 6.60 1.36 1.44 1.47 4 296088 Transcript 0 2.96 29.40 1.57 11.35 13.75 13.17 4.46 20.87 48.06 19.23 0.00 0.00 0.00 2.47 8.90 3.76 4.02 16.21 4.24 25.82 0.00 5.39 0.00 5 437827 Transcript 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 2.18 1.56 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 462810 Transcript 0 36.78 18.79 9.68 17.95 21.27 2.34 15.46 14.21 11.06 6.91 1.00 5.24 5.76 2.53 4.36 3.65 2.49 4.08 1.78 7.88 2.50 1.97 3.24 7 484791 Transcript 0 6.18 20.99 3.64 12.17 14.63 10.39 17.50 17.05 18.70 8.03 10.26 24.70 12.13 13.68 2.75 8.76 11.69 24.41 13.18 30.11 4.97 10.06 4.86 8 481892 Transcript 0 7.83 14.37 2.89 9.90 16.62 8.31 8.15 9.12 11.39 3.71 2.36 9.89 10.37 6.57 2.95 8.32 2.03 7.56 8.07 8.63 2.67 4.61 1.08 9 468628 Transcript 0 1.76 1.54 1.19 1.58 1.76 2.03 1.57 1.33 1.46 0.54 0.00 0.19 3.63 0.97 1.83 0.78 3.74 3.76 1.07 3.74 2.63 0.00 0.83 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 11 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 12 ER1c ExonRegion 0 3.40 4.82 1.28 0.00 7.39 13.71 6.59 0.64 1.37 0.00 0.76 0.00 0.00 4.55 2.08 8.98 4.31 3.13 7.06 8.97 5.84 1.86 12.96 13 E1_Ad KnownBoundary 0 14.37 22.23 4.64 0.00 17.15 36.29 15.41 1.93 3.18 1.67 7.26 0.00 0.00 9.77 6.18 32.21 9.16 10.07 22.68 26.59 15.26 8.88 33.80 14 ER1d ExonRegion 0 38.72 98.87 5.67 19.16 26.43 91.11 67.42 22.45 46.60 20.53 6.15 0.00 11.86 12.46 5.05 22.24 24.00 28.46 25.23 132.18 16.22 17.21 22.67 15 E1a_E2a KnownJunction 0 0.00 3.35 0.00 12.35 4.33 4.77 0.00 12.77 4.11 3.12 0.00 0.00 0.00 2.47 0.00 0.00 0.00 13.43 0.00 11.12 0.00 0.00 0.00 16 E1a_E3a KnownJunction 0 2.96 29.40 1.57 11.35 13.75 13.17 4.46 20.87 48.06 19.23 0.00 0.00 0.00 2.47 8.90 3.76 4.02 16.21 4.24 25.82 0.00 5.39 0.00 17 E1a_E4a KnownJunction 0 0.00 6.05 1.80 7.82 0.00 7.50 0.00 7.80 12.21 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.48 0.00 0.00 2.72 2.88 0.00 18 E1a_E5b KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 2.18 1.56 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER2a ExonRegion 0 0.00 5.29 0.00 3.52 1.61 4.33 2.67 4.81 7.24 2.57 0.00 0.00 0.00 3.38 0.00 0.00 3.50 3.66 0.45 14.26 2.29 0.17 0.00 20 E2a_E3a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 1.64 11.26 1.21 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 18.79 0.00 0.00 0.00 21 ER3a ExonRegion 0 4.85 32.41 7.69 12.20 6.09 21.41 10.51 22.80 40.92 16.61 12.91 43.43 13.24 16.27 5.90 7.96 22.41 13.17 23.94 69.05 20.44 13.61 13.93 22 E3a_E4a KnownJunction 1 6.30 41.64 13.87 14.48 12.39 9.31 13.91 32.16 43.49 21.52 30.48 57.77 20.45 23.96 4.94 0.00 37.12 19.90 29.18 104.06 31.26 17.88 26.12 23 E4_Ab NovelBoundary 0 17.63 23.55 8.90 11.79 0.00 0.00 18.20 28.46 53.24 23.75 21.53 16.81 5.84 15.60 9.64 3.93 19.45 35.07 32.85 66.41 12.85 9.98 28.77 24 ER4a ExonRegion 1 10.16 35.38 14.54 22.26 6.96 13.33 19.07 41.71 69.99 34.64 30.67 36.08 20.01 27.61 6.77 5.55 32.57 48.16 42.26 103.97 29.38 19.03 32.30 25 ER4b ExonRegion 1 26.43 98.46 31.12 75.22 77.10 92.78 82.67 94.27 121.70 48.85 55.03 112.55 68.83 58.54 16.48 46.23 54.08 99.64 68.25 197.83 32.55 71.24 39.80 26 E4a_E5b KnownJunction 1 34.45 136.23 19.93 78.58 62.99 56.22 80.55 107.78 116.41 39.43 82.55 185.61 82.14 90.41 13.97 39.05 64.05 134.97 78.78 195.65 45.16 71.34 30.56 27 I4_AR2 ActiveIntronRegion 0 7.15 7.26 7.77 15.40 11.17 0.85 20.21 14.28 11.64 3.88 0.89 12.73 5.20 0.52 1.94 0.00 3.09 0.00 1.52 12.18 0.00 0.32 0.45 28 I4_AR3 ActiveIntronRegion 0 60.05 32.65 13.73 24.33 29.99 5.62 20.50 15.76 7.36 6.51 0.47 9.81 3.02 0.98 1.60 1.93 1.46 2.51 2.90 12.48 0.57 2.49 1.15 29 ER5a ExonRegion 0 6.88 33.05 4.60 19.42 15.39 13.30 19.20 25.06 28.10 12.90 17.88 41.13 19.93 24.36 3.63 9.66 17.33 36.49 19.91 50.53 9.92 15.63 8.08 30 ER5b ExonRegion 1 54.07 158.43 30.58 97.06 101.60 132.07 110.14 104.03 124.26 53.68 64.62 112.07 109.47 86.25 20.39 54.89 67.17 135.45 76.02 228.11 47.26 71.15 51.11 31 E5_Da KnownBoundary 0 43.27 20.00 3.28 5.49 16.64 0.00 7.91 7.72 14.00 10.21 0.00 0.00 12.66 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 0.00 4.27 32 E5a_E6a KnownJunction 0 64.01 153.53 28.98 97.02 121.73 190.29 107.05 107.66 130.09 59.82 59.59 118.54 95.61 68.46 14.09 41.19 52.36 119.97 33.88 194.12 42.94 71.58 67.69 33 ER5c ExonRegion 0 36.78 18.79 9.68 17.95 21.27 2.34 15.46 14.21 11.06 6.91 1.00 5.24 5.76 2.53 4.36 3.65 2.49 4.08 1.78 7.88 2.50 1.97 3.24 34 ER6a ExonRegion 1 37.06 143.18 44.41 107.05 103.91 122.56 85.03 112.09 162.04 74.28 58.43 116.53 94.86 84.84 20.04 59.32 56.21 179.39 99.61 250.97 54.79 79.55 59.06 35 E6_Da KnownBoundary 0 3.19 13.55 5.14 14.45 20.29 2.90 13.20 11.67 15.54 10.77 0.00 0.00 0.00 11.77 0.00 4.36 9.54 13.97 11.86 5.69 0.00 11.70 0.00 36 E6a_E7b KnownJunction 1 29.71 162.87 54.02 157.46 66.81 137.25 58.69 130.41 169.01 64.74 41.69 127.09 33.11 53.33 9.39 70.32 46.38 155.16 93.09 246.15 66.35 97.24 65.99 37 ER6b ExonRegion 0 5.48 8.94 2.68 4.93 13.88 7.49 15.79 9.04 9.30 3.15 2.64 8.28 4.33 2.99 1.87 7.85 6.06 12.33 6.46 9.69 0.02 4.49 1.65 38 E6_Db NovelBoundary 0 24.08 6.51 9.20 10.39 0.00 8.69 10.47 9.08 17.77 4.51 4.21 6.30 14.61 7.12 4.45 11.54 0.00 25.74 4.80 11.31 9.33 0.00 3.33 39 I6_SR1 SilentIntronRegion 0 4.20 7.17 3.96 9.81 19.55 11.42 23.41 8.50 9.65 4.96 1.48 8.00 6.35 5.11 1.59 2.47 4.69 9.21 7.14 8.94 2.72 2.97 1.47 40 E7_Aa NovelBoundary 0 20.15 5.85 3.67 8.72 26.99 5.68 34.45 16.59 15.19 7.20 0.00 26.11 6.66 4.59 0.00 8.37 0.00 3.73 4.80 14.57 0.00 6.25 6.74 41 ER7a ExonRegion 0 7.83 14.37 2.89 9.90 16.62 8.31 8.15 9.12 11.39 3.71 2.36 9.89 10.37 6.57 2.95 8.32 2.03 7.56 8.07 8.63 2.67 4.61 1.08 42 E7_Ab KnownBoundary 0 3.19 12.17 3.67 7.82 0.00 0.00 7.07 8.46 15.25 2.69 7.16 0.00 7.95 7.06 0.00 4.36 0.00 4.52 9.04 2.81 0.00 0.00 0.00 43 E7_Ac KnownBoundary 0 35.78 78.34 23.03 49.88 31.58 24.13 16.30 51.14 64.67 20.98 13.90 17.71 12.99 6.83 0.00 21.87 24.40 51.90 41.04 102.40 24.96 22.23 18.69 44 ER7b ExonRegion 1 33.86 160.65 49.89 133.37 75.69 102.43 55.42 124.94 170.09 64.55 51.64 121.23 45.56 54.99 11.61 60.29 49.51 151.52 95.11 240.73 64.85 75.60 54.12 45 ER7c ExonRegion 0 34.20 124.08 33.07 83.53 86.87 116.57 68.42 112.99 140.61 60.91 53.56 100.46 61.27 73.21 26.34 70.84 56.19 157.71 96.61 235.90 51.14 53.43 42.04 46 E7a_E8a KnownJunction 0 67.49 151.35 28.47 86.00 75.55 135.55 80.60 121.54 159.81 76.77 71.28 114.19 68.34 76.52 41.66 75.11 44.04 202.42 158.12 218.60 68.39 65.64 48.32 47 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 I7_AR1 ActiveIntronRegion 1 29.44 26.44 54.30 38.86 41.62 46.96 18.91 27.12 27.58 15.49 5.31 6.60 8.82 2.88 16.32 4.90 3.93 19.50 11.96 15.75 2.82 8.39 5.10 49 E8_Aa NovelBoundary 0 48.16 51.70 118.09 66.33 92.36 130.04 40.89 36.76 32.81 11.44 4.58 0.00 13.15 4.59 19.90 8.20 20.66 35.98 22.59 56.57 0.00 11.45 13.06 50 ER8a ExonRegion 0 62.78 120.70 71.41 96.99 74.92 138.17 48.88 103.62 135.94 56.49 41.64 49.92 41.28 58.78 30.41 45.13 44.57 172.19 65.57 195.96 53.35 41.35 37.18 51 E8_Da KnownBoundary 0 95.94 166.42 113.01 115.64 140.83 225.04 94.29 118.66 158.19 65.19 27.01 42.91 79.70 81.88 41.54 34.61 65.92 223.27 84.90 185.10 64.12 53.33 29.71 52 ER8b ExonRegion 0 68.06 176.10 99.66 114.28 116.05 170.89 70.86 113.53 139.03 72.94 37.24 41.26 33.30 65.74 36.01 49.05 49.12 207.48 77.30 182.57 52.89 54.95 42.18 53 E8_Db KnownBoundary 0 161.95 404.99 126.55 164.61 216.98 267.80 108.07 140.97 155.84 80.45 32.85 56.72 58.76 21.90 19.28 27.60 36.09 79.71 86.97 161.52 24.90 51.56 15.54 54 ER8c ExonRegion 1 139.17 429.30 125.80 176.20 244.37 281.11 172.21 165.52 158.81 91.55 37.27 58.17 115.76 57.15 21.95 50.81 40.27 94.37 76.00 159.42 14.86 76.16 31.02 55 E8_Dc KnownBoundary 0 169.66 381.64 152.27 257.11 403.74 377.28 261.80 233.38 197.63 115.53 47.54 73.67 97.40 73.17 64.90 54.86 67.41 115.36 97.60 171.30 25.58 94.18 72.56 56 ER8d ExonRegion 0 207.51 308.52 141.11 269.68 263.27 204.74 165.46 205.99 187.78 101.16 40.50 89.90 66.92 45.42 48.41 36.46 37.00 90.62 67.03 166.55 16.61 77.65 33.58 57 ER8e ExonRegion 0 15.66 4.07 5.64 9.81 23.01 6.97 2.91 8.64 3.21 3.21 2.71 6.06 3.75 1.62 2.90 0.00 0.00 1.85 0.00 13.19 0.00 0.00 2.94 58 I8 Intron 0 3.45 7.90 8.01 4.07 6.04 33.32 5.81 8.06 17.07 4.07 1.21 0.99 7.40 2.93 1.03 0.37 3.72 35.57 4.79 25.06 3.59 3.39 4.78 59 I8_SR1 SilentIntronRegion 0 3.46 7.91 8.03 4.08 6.05 33.40 5.82 8.08 17.11 4.08 1.21 0.99 7.42 2.94 1.03 0.37 3.73 35.65 4.80 25.12 3.60 3.40 4.80 60 Ix Intron 0 2.95 7.45 12.15 8.50 6.38 14.07 4.58 7.11 9.95 4.62 0.62 0.36 2.60 2.80 3.25 0.60 6.81 31.26 8.42 19.41 4.67 2.54 5.55 61 Ix_SR1 SilentIntronRegion 0 2.12 3.32 6.34 6.24 4.26 14.29 4.61 4.98 8.55 3.61 0.59 0.54 4.09 2.57 2.91 0.00 3.69 27.06 10.65 9.70 1.67 2.64 4.80 62 Ix_AR1 ActiveIntronRegion 0 5.70 11.26 22.62 22.33 7.72 30.54 10.74 12.10 15.72 8.73 0.00 0.00 5.59 1.31 0.11 0.00 9.14 63.61 20.09 19.31 3.64 6.65 17.28 63 Ix_AR2 ActiveIntronRegion 0 5.57 0.72 16.86 9.62 0.00 16.61 7.50 10.21 12.58 5.39 0.00 0.00 7.99 0.63 1.02 0.00 6.11 25.29 3.30 14.93 4.37 0.81 6.58 64 Ix_SR2 SilentIntronRegion 0 6.82 0.00 21.10 9.09 0.00 17.73 8.39 11.52 13.31 4.59 0.00 0.00 0.00 1.62 5.80 0.00 9.17 14.37 3.19 16.08 6.61 3.47 5.87 65 Ix_AR3 ActiveIntronRegion 0 2.44 8.71 19.61 12.88 7.10 21.90 6.92 10.38 10.62 6.45 0.39 0.00 0.00 1.26 5.42 0.00 7.88 32.59 10.65 17.95 3.81 5.65 11.03 66 Ix_SR4 SilentIntronRegion 0 1.64 5.26 7.09 1.05 4.85 6.17 1.71 6.66 4.76 1.33 1.50 0.00 4.71 0.69 3.62 3.85 2.56 29.74 4.95 12.12 2.85 1.62 3.80 67 Ix_AR5 ActiveIntronRegion 0 3.67 11.13 14.80 7.03 9.20 16.08 4.31 9.16 11.58 3.93 0.48 0.00 2.49 3.80 3.08 0.19 5.48 35.23 8.40 25.35 5.28 2.20 4.92 68 Ix_SR5 SilentIntronRegion 0 3.24 8.17 10.87 11.32 6.49 10.05 4.01 4.58 10.69 6.05 0.63 0.95 1.36 4.18 2.74 0.48 11.39 30.01 7.20 25.73 7.60 1.47 3.68 69 ER9a ExonRegion 0 2.12 1.02 0.91 2.03 5.35 7.34 2.65 2.59 2.72 0.00 0.00 0.00 5.52 0.67 0.00 0.00 6.60 8.24 1.59 9.57 2.16 0.00 1.47 70 E9_Da NovelBoundary 0 40.30 15.46 10.26 10.49 12.90 18.91 17.36 13.02 12.85 7.39 2.68 0.00 6.82 4.94 4.45 0.00 13.93 70.26 37.65 45.38 0.00 2.76 12.89 71 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 Ix Intron 0 1.84 2.97 7.92 4.32 2.25 10.94 3.67 7.45 10.35 4.62 0.69 0.21 4.63 3.67 6.19 0.48 10.23 31.47 9.55 19.94 6.63 3.11 5.25 73 Ix_SR1 SilentIntronRegion 0 1.50 3.34 5.34 4.29 2.56 11.12 4.30 6.71 10.43 5.16 0.38 0.16 2.72 2.97 5.86 0.66 9.77 25.70 9.89 19.25 6.22 2.06 3.66 74 Ix_AR1 ActiveIntronRegion 0 2.33 1.86 10.25 5.55 3.11 12.52 4.20 8.66 13.03 5.71 0.68 0.33 3.53 3.44 8.31 0.83 11.69 34.68 11.77 20.72 7.92 4.02 4.92 75 Ix_SR2 SilentIntronRegion 0 1.25 1.90 7.03 2.69 0.55 10.85 2.64 5.21 8.45 3.95 1.00 0.19 4.75 3.80 5.93 0.16 10.77 29.65 8.51 17.09 5.62 2.64 5.89 76 Ix_AR2 ActiveIntronRegion 0 2.82 5.17 13.12 7.06 3.84 10.12 3.18 12.69 12.12 4.44 0.74 0.34 10.33 4.95 5.63 0.28 8.09 44.23 10.04 26.95 7.54 4.37 7.56 77 Ix_SR3 SilentIntronRegion 0 2.56 3.18 7.08 2.19 2.12 8.78 4.68 5.70 7.74 2.74 0.78 0.00 3.23 4.20 5.25 0.60 11.70 30.80 6.08 17.58 7.73 5.02 5.85 78 E10_Aa NovelBoundary 0 3.78 12.10 3.31 5.36 0.00 5.34 13.96 6.20 9.84 1.67 0.00 0.00 19.80 2.47 15.95 3.85 9.54 5.93 4.80 8.95 6.30 0.00 0.00 79 ER10a ExonRegion 0 4.91 5.14 3.85 4.28 1.69 0.77 3.63 2.71 3.10 2.16 0.00 0.75 9.01 3.22 7.34 3.13 8.35 6.78 2.69 5.37 8.36 0.00 1.86