Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	KLHL18	Gene	0	26.08	28.93	29.54	28.41	21.09	20.95	27.81	29.69	30.53	24.47	100.71	36.18	39.07	118.19	79.89	65.20	49.52	54.70	26.49	46.07	40.63	26.18	26.88
2	455924	Transcript	0	1.45	4.42	7.05	1.39	2.66	0.57	3.70	5.95	12.35	6.24	24.96	0.27	5.18	54.30	9.04	17.14	22.52	23.32	1.59	4.72	11.37	3.23	6.47
3	433449	Transcript	0	3.70	6.12	5.78	2.29	2.04	3.43	5.39	3.87	3.99	1.56	4.03	1.09	2.49	9.87	2.79	9.96	0.51	9.57	0.98	4.68	3.48	0.96	1.63
4	437353	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	461084	Transcript	0	9.39	10.12	12.93	14.66	10.11	6.61	15.87	11.61	9.91	6.75	11.49	12.21	14.67	17.84	15.51	16.24	12.31	16.14	10.18	17.42	8.43	6.43	9.76
6	232766	Transcript	0	58.68	58.16	51.70	48.26	44.44	39.27	46.57	49.85	48.47	38.40	158.54	69.55	71.67	192.43	152.23	97.44	69.49	69.96	44.17	61.45	54.88	43.68	40.94
7	442272	Transcript	0	0.00	0.00	0.00	0.00	3.57	0.00	1.77	0.00	1.33	0.00	4.69	0.00	0.00	0.00	5.69	0.00	4.02	2.49	0.00	0.00	0.00	0.00	0.00
8	450219	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	483201	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	0.11	0.00	0.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.21	4.80	0.50	0.00	0.52	0.00	0.00	0.00	0.00	0.00
11	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	5.23	0.00	2.33	2.16	2.55	9.26	4.73	6.84	0.00	0.00	22.01	20.27	13.84	4.30	24.25	8.47	17.51	0.00	0.00	18.87
12	E1_Ac	KnownBoundary	0	3.70	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	2.41	0.00	4.10	4.49	9.45	0.00	2.94	0.00	0.00	0.00
13	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00
14	ER1b	ExonRegion	0	2.12	0.14	2.37	0.00	0.00	1.58	0.00	0.00	1.28	1.46	7.00	2.99	0.00	9.41	14.91	2.97	9.90	6.37	0.77	0.73	5.32	2.37	0.00
15	E1_Ae	KnownBoundary	0	0.00	2.96	4.29	0.00	0.00	0.00	5.70	0.00	6.16	4.16	41.01	0.00	0.00	12.01	19.66	0.00	8.42	17.29	4.71	8.50	17.30	9.37	3.33
16	ER1c	ExonRegion	0	2.12	2.03	3.68	0.00	0.00	1.83	0.00	0.00	2.47	2.29	19.33	4.33	0.00	11.37	17.41	2.97	13.20	11.09	3.19	2.13	15.43	6.25	0.00
17	ER1d	ExonRegion	1	2.29	3.22	6.13	0.57	0.00	4.28	3.31	2.30	4.63	2.77	48.81	4.33	0.00	22.60	37.47	8.42	23.38	19.86	3.98	6.21	19.83	7.99	7.59
18	ER1e	ExonRegion	1	9.39	9.08	16.63	21.06	2.85	16.11	22.49	15.30	23.78	20.96	186.42	7.86	14.59	63.16	91.31	79.30	90.71	78.33	38.08	34.45	40.55	18.10	37.35
19	E1a_E2a	KnownJunction	1	0.00	8.81	2.96	3.36	0.00	4.83	0.00	2.55	9.00	3.65	98.13	6.30	7.47	11.65	54.02	7.95	49.93	1.70	0.00	5.88	0.00	3.00	0.00
20	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E1a_E4a	KnownJunction	0	2.89	3.35	5.26	9.49	0.00	5.68	6.45	24.85	9.92	13.24	120.50	17.41	19.48	44.68	31.89	19.48	58.72	57.21	18.17	21.54	62.83	11.08	12.38
22	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	3.57	0.00	1.77	0.00	1.33	0.00	4.69	0.00	0.00	0.00	5.69	0.00	4.02	2.49	0.00	0.00	0.00	0.00	0.00
23	E2_Aa	NovelBoundary	0	0.00	0.00	4.49	3.23	0.00	0.00	2.03	6.61	6.71	8.70	2.68	0.00	0.00	4.94	0.00	0.00	9.44	1.82	0.00	11.44	2.41	2.27	12.72
24	ER2a	ExonRegion	1	1.89	4.52	8.15	12.82	2.28	5.33	7.63	9.01	16.99	10.00	75.50	7.35	12.25	31.61	52.78	22.47	29.80	7.38	7.40	14.63	1.87	3.37	5.01
25	I2_AR1	ActiveIntronRegion	0	1.80	4.81	12.19	7.50	2.27	1.33	12.58	15.14	15.11	7.97	6.73	9.71	9.26	10.53	9.94	9.88	8.55	3.86	8.12	13.60	1.87	3.54	5.36
26	I2_SR2	SilentIntronRegion	0	11.49	9.76	13.02	14.34	4.81	5.51	16.17	10.66	14.16	8.49	9.41	17.67	24.76	12.43	18.53	9.98	7.34	4.34	5.21	16.35	1.47	1.28	4.44
27	I2_AR2	ActiveIntronRegion	0	10.30	12.93	15.21	16.18	8.29	4.26	14.64	12.97	13.10	7.20	9.09	13.95	31.03	9.82	10.29	12.28	7.03	5.20	9.39	12.81	2.15	1.50	4.22
28	E3_Aa	NovelBoundary	0	6.59	25.06	16.26	12.32	0.00	8.12	14.93	30.81	13.45	5.32	7.21	0.00	13.15	17.01	5.81	35.20	3.83	17.66	9.13	5.75	2.41	2.51	16.30
29	ER3a	ExonRegion	1	7.32	12.26	9.46	3.34	6.12	4.89	10.42	5.03	5.42	4.68	7.14	3.28	7.48	12.79	8.36	16.82	1.52	16.43	2.93	11.48	2.03	2.87	1.56
30	E3_Da	NovelBoundary	0	17.19	30.39	17.86	9.42	12.05	16.69	29.10	6.74	7.29	2.53	2.47	11.85	19.32	0.00	8.90	21.53	4.02	3.77	9.41	2.68	0.00	3.06	4.18
31	E3a_E4a	KnownJunction	0	3.78	6.12	7.86	3.53	0.00	5.39	5.74	6.57	6.54	0.00	4.95	0.00	0.00	16.83	0.00	13.07	0.00	12.27	0.00	2.56	8.40	0.00	3.33
32	ER4a	ExonRegion	0	13.51	17.08	30.48	36.84	3.76	13.61	18.76	34.27	29.99	26.91	191.68	35.73	39.45	144.71	61.59	115.57	95.37	120.65	50.80	76.06	69.44	34.07	57.01
33	E4a_E5a	KnownJunction	0	32.89	45.78	26.02	33.66	7.47	13.97	37.45	37.30	30.47	30.97	129.51	35.26	46.59	85.64	68.24	78.01	51.33	106.74	14.97	51.26	38.05	17.64	41.40
34	ER5a	ExonRegion	0	11.81	30.63	33.74	36.78	22.00	23.79	41.92	38.06	30.84	24.63	136.32	27.80	39.43	150.74	66.96	72.27	79.91	94.59	36.04	77.39	62.79	26.98	32.26
35	E5b_E6a	KnownJunction	1	14.82	12.04	44.20	14.98	12.39	7.15	4.15	18.57	36.37	17.41	156.93	46.07	49.67	180.06	28.56	65.62	56.01	61.35	33.13	55.80	57.58	22.60	29.19
36	ER5b	ExonRegion	1	16.93	14.24	46.56	17.72	13.38	16.50	7.94	25.93	40.76	20.64	156.56	51.95	56.28	178.65	34.82	68.36	75.92	70.21	35.04	72.34	59.50	25.00	35.24
37	ER5c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	I5_AR1	ActiveIntronRegion	0	7.55	13.17	11.62	15.16	7.13	6.96	11.36	19.46	11.39	10.34	2.54	2.95	14.05	2.29	10.84	9.82	8.04	9.93	7.57	18.34	3.74	1.66	6.09
39	E6_Aa	NovelBoundary	0	3.26	8.35	2.90	8.46	0.00	16.87	13.69	15.61	10.68	7.49	0.00	13.05	0.00	4.77	0.00	11.19	0.00	3.90	9.51	2.62	0.00	2.69	0.00
40	ER6a	ExonRegion	0	20.08	31.18	36.72	29.08	15.41	16.42	20.70	34.72	32.92	27.17	148.84	36.92	44.52	159.13	77.21	88.49	60.10	90.74	29.24	74.86	59.85	31.94	36.26
41	E6_Da	NovelBoundary	0	12.89	40.39	5.47	5.29	16.47	4.43	14.53	17.83	19.53	10.05	7.32	6.30	20.78	14.77	30.04	8.20	4.58	17.78	17.04	5.24	11.12	5.51	3.93
42	E6a_E7a	KnownJunction	0	3.70	32.63	29.77	18.51	4.33	19.87	34.14	39.72	18.34	24.74	160.72	38.71	47.89	192.13	73.06	101.94	63.21	73.21	38.97	67.69	48.12	24.92	33.29
43	I6	Intron	0	4.35	7.31	5.31	5.39	5.27	2.04	7.36	7.49	5.98	3.66	5.63	4.71	5.05	5.86	10.88	14.50	7.63	9.20	4.36	10.74	2.26	1.96	5.03
44	I6_AR1	ActiveIntronRegion	0	4.85	6.32	5.73	5.54	5.79	2.63	7.66	6.58	6.59	3.66	6.34	5.68	4.32	6.85	10.59	14.52	7.00	9.16	3.43	9.35	2.07	1.19	5.18
45	I6_SR2	SilentIntronRegion	0	5.59	8.25	7.30	8.03	5.18	1.80	5.46	13.79	7.90	5.69	6.46	3.85	8.00	4.45	11.74	21.52	13.33	14.41	7.91	17.84	2.51	4.86	5.51
46	E7_Aa	NovelBoundary	0	0.00	9.08	4.67	4.53	7.56	0.00	6.01	16.59	11.14	8.11	5.16	20.71	0.00	4.77	9.64	0.00	4.77	12.77	0.00	26.40	7.91	6.06	0.00
47	ER7a	ExonRegion	1	7.47	20.58	18.87	17.13	13.81	16.72	20.32	25.13	17.94	29.57	123.23	16.86	38.83	144.37	61.76	78.94	66.28	80.46	21.29	60.47	62.06	30.89	31.61
48	E7_Da	NovelBoundary	0	0.00	2.70	6.71	3.40	0.00	0.00	4.28	0.00	1.30	6.96	0.00	0.00	0.00	0.00	0.00	0.00	8.32	6.63	13.55	10.99	3.15	0.00	0.00
49	E7a_E8a	KnownJunction	1	7.04	24.01	16.41	13.92	25.81	5.28	16.61	29.33	24.83	22.99	124.24	12.60	20.29	133.56	43.02	72.55	64.70	83.78	12.42	45.70	69.07	19.41	32.61
50	E8_Aa	NovelBoundary	0	2.96	0.00	5.77	8.62	3.57	0.00	6.05	11.38	0.00	2.04	2.68	0.00	6.66	0.00	8.90	11.88	4.77	12.19	4.80	19.75	5.31	3.06	0.00
51	ER8a	ExonRegion	0	14.00	23.91	19.15	20.11	9.49	13.49	16.75	25.60	32.92	25.10	122.01	33.21	31.53	155.42	71.11	74.26	67.03	65.20	20.65	55.40	60.77	24.82	29.60
52	E8_Da	NovelBoundary	0	10.52	16.31	18.10	7.59	24.79	0.00	15.63	19.02	4.89	5.80	10.21	0.00	0.00	16.95	20.40	7.43	16.64	21.80	7.72	6.52	10.63	0.00	8.37
53	E8a_E9a	KnownJunction	1	0.00	3.35	11.21	1.27	3.31	0.00	3.58	8.79	17.91	9.32	31.27	0.00	0.00	83.23	8.90	20.08	25.06	33.29	0.00	6.46	14.70	2.39	7.85
54	E8a_E9b	KnownJunction	1	0.00	9.47	7.18	11.45	4.33	18.17	5.39	20.62	8.28	16.65	106.66	12.15	7.14	134.50	49.45	62.89	51.61	35.61	8.85	28.38	49.17	9.12	13.57
55	I8	Intron	0	7.71	10.23	8.62	8.55	8.24	3.01	14.88	9.52	8.59	4.82	13.19	8.15	16.21	14.93	13.67	15.56	13.55	12.02	5.88	11.36	3.73	2.89	5.88
56	I8_SR1	SilentIntronRegion	0	8.28	9.20	7.84	7.01	7.18	2.25	14.52	9.48	7.76	3.67	12.01	8.42	17.69	15.86	16.03	17.78	11.13	12.75	6.60	12.57	4.23	3.99	6.53
57	I8_AR1	ActiveIntronRegion	0	6.60	12.37	10.25	11.72	10.43	4.58	15.69	9.64	10.33	7.20	15.68	7.65	13.30	13.14	8.94	11.13	18.53	10.61	4.47	8.96	2.75	0.65	4.58
58	E9_Aa	NovelBoundary	0	6.52	3.29	3.67	20.74	0.00	0.00	17.31	2.46	9.20	7.76	11.58	5.70	0.00	16.72	9.64	8.03	9.35	15.75	8.09	2.49	11.24	0.00	3.33
59	E9_Ab	NovelBoundary	0	7.26	16.05	14.31	0.00	8.32	0.00	11.04	6.94	16.00	11.31	38.69	0.00	20.45	38.20	10.75	25.63	57.50	34.57	4.05	2.56	12.91	8.45	13.83
60	ER9a	ExonRegion	1	4.23	9.91	9.73	2.90	4.68	1.72	7.53	9.07	19.14	9.39	43.61	0.81	15.54	77.45	13.42	30.84	42.50	36.15	4.78	7.71	19.42	7.29	11.56
61	ER9b	ExonRegion	0	6.81	14.86	25.68	24.97	13.02	20.25	26.01	21.94	33.83	29.04	126.30	28.45	40.48	163.96	77.72	84.85	66.63	70.86	25.90	65.33	59.77	25.20	37.37
62	E9_Da	KnownBoundary	0	24.15	13.42	8.63	6.06	4.16	7.84	14.93	13.47	8.28	1.67	18.90	6.30	13.47	7.42	8.90	4.27	8.51	33.95	4.80	8.05	11.61	6.25	25.61
63	E9a_E10a	KnownJunction	0	7.11	25.00	17.59	24.07	21.99	10.11	13.65	21.24	29.34	28.63	138.77	44.41	44.48	166.34	85.91	111.51	67.04	89.75	55.72	52.35	69.50	13.47	46.18
64	ER9c	ExonRegion	0	10.79	4.98	11.98	6.37	8.63	4.03	13.24	10.76	6.85	1.84	13.92	2.71	19.23	13.44	7.11	8.17	6.60	30.86	6.21	9.95	13.06	6.25	9.62
65	E9_Db	KnownBoundary	0	7.56	3.35	12.15	7.86	17.15	0.00	9.98	4.89	3.99	1.24	16.43	0.00	12.66	19.25	11.50	15.64	4.77	15.96	0.00	17.71	13.84	5.33	0.00
66	ER9d	ExonRegion	0	9.39	10.12	12.93	14.66	10.11	6.61	15.87	11.61	9.91	6.75	11.49	12.21	14.67	17.84	15.51	16.24	12.31	16.14	10.18	17.42	8.43	6.43	9.76
67	E9_Dc	NovelBoundary	0	14.82	69.46	16.97	13.65	34.47	75.18	45.58	28.79	30.35	16.06	10.69	27.61	19.48	32.55	23.86	24.44	11.69	26.74	42.73	32.47	17.17	23.88	48.66
68	E10_Aa	NovelBoundary	0	16.45	6.58	30.34	15.92	16.30	2.27	11.53	4.44	8.85	4.49	14.53	5.55	12.66	15.60	9.64	30.93	4.77	22.63	7.15	12.02	11.43	2.51	10.76
69	ER10a	ExonRegion	0	9.70	19.19	23.88	28.15	9.68	12.94	23.45	22.21	29.88	21.08	138.80	37.77	45.69	167.35	88.14	112.09	79.66	85.54	29.12	65.43	66.99	25.78	30.26
70	E10_Da	NovelBoundary	0	6.30	8.81	6.36	6.66	0.00	0.00	15.41	5.79	0.00	5.35	4.84	12.00	6.66	17.07	9.89	6.92	4.77	15.63	4.80	14.32	0.00	0.00	0.00
71	E10a_E11a	KnownJunction	0	6.74	5.59	24.84	21.88	7.98	14.71	23.14	18.07	46.53	23.91	128.14	54.47	70.29	175.88	91.35	124.58	60.78	60.65	23.06	56.18	59.06	29.76	33.55
72	I10	Intron	0	12.66	8.58	10.74	13.55	9.34	3.74	11.81	9.26	8.66	4.08	5.88	5.85	8.98	9.25	9.68	7.91	4.11	8.58	5.51	10.52	4.57	2.95	3.45
73	I10_SR1	SilentIntronRegion	0	12.68	8.59	10.75	13.57	9.36	3.74	11.82	9.27	8.67	4.08	5.89	5.85	8.99	9.26	9.70	7.92	4.11	8.59	5.51	10.53	4.57	2.96	3.46
74	E11_Aa	NovelBoundary	0	6.74	5.92	21.32	18.05	8.66	9.31	22.66	24.56	10.56	10.93	7.53	5.40	0.00	14.54	4.45	3.16	15.80	16.50	0.00	12.98	2.59	11.14	12.89
75	ER11a	ExonRegion	0	13.93	21.92	29.17	25.34	12.90	23.72	25.17	31.90	37.13	28.80	160.10	29.80	33.71	167.82	92.81	100.10	86.32	86.13	26.22	68.43	78.13	36.44	31.49
76	E11_Da	NovelBoundary	0	13.78	8.49	6.42	10.19	8.49	2.50	16.78	12.45	2.86	5.83	0.00	12.30	33.76	18.01	4.45	0.00	0.00	16.04	19.01	6.39	3.15	0.00	11.18
77	E11a_E12a	KnownJunction	0	22.37	11.64	32.79	19.71	11.97	16.81	16.08	36.43	41.49	19.50	81.02	13.20	31.98	115.66	86.16	88.18	89.01	59.90	17.98	57.78	64.31	24.86	35.68
78	E12_Aa	NovelBoundary	0	7.33	6.31	15.76	2.00	7.98	2.38	6.49	10.93	8.13	1.29	2.21	0.00	6.82	4.53	23.49	4.36	0.00	13.56	0.00	6.39	2.35	0.00	7.43
79	ER12a	ExonRegion	0	18.09	24.58	29.53	25.78	13.11	22.37	26.28	36.12	43.34	36.12	122.60	37.34	34.21	165.90	80.57	86.92	62.96	80.47	26.28	63.21	64.74	36.20	29.77
80	E12_Da	KnownBoundary	0	34.82	8.29	25.90	22.34	12.90	21.35	44.21	31.30	41.46	36.69	67.75	23.11	39.61	76.34	29.17	42.72	58.44	28.02	27.29	35.22	14.70	35.33	19.29
81	ER12b	ExonRegion	0	58.68	58.16	51.70	48.26	44.44	39.27	46.57	49.85	48.47	38.40	158.54	69.55	71.67	192.43	152.23	97.44	69.49	69.96	44.17	61.45	54.88	43.68	40.94
82	IG8_SR1	SilentIntergenicRegion	0	3.81	31.52	1.70	1.36	12.77	6.73	7.79	8.27	8.98	10.40	9.69	31.73	37.39	28.89	6.47	11.89	6.70	3.64	0.00	12.19	0.00	8.10	8.31
83	IG8_AR1	ActiveIntergenicRegion	0	3.33	23.82	3.50	5.26	33.26	12.84	25.53	14.82	17.82	23.43	22.09	57.52	38.86	46.87	18.24	24.63	9.90	8.18	0.00	19.15	1.26	10.42	22.65
84	IG8_SR2	SilentIntergenicRegion	0	8.94	25.28	4.31	10.25	37.41	12.74	37.39	13.35	21.15	25.75	32.63	49.42	40.67	50.77	10.95	20.39	9.50	9.88	3.41	22.38	6.95	9.91	20.20
85	IG8_AR2	ActiveIntergenicRegion	0	8.12	21.18	6.01	9.35	14.16	15.78	17.74	11.96	14.79	13.55	17.20	21.79	29.56	38.71	20.08	28.13	20.03	20.54	10.33	24.82	9.25	7.51	11.23
86	IG8_AR3	ActiveIntergenicRegion	0	7.72	7.81	14.03	11.70	8.61	12.51	8.77	6.18	5.66	8.04	7.06	7.27	5.99	16.63	15.42	7.56	7.13	10.63	9.03	14.51	8.25	2.40	6.63