Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TUSC2 Gene 0 37.19 24.70 42.89 46.45 33.86 32.73 32.67 42.81 26.84 37.82 80.80 20.92 16.98 91.85 116.60 112.59 66.54 40.16 40.51 33.24 46.75 27.56 30.75 2 421918 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 3 232496 Transcript 0 53.86 40.74 60.02 74.64 54.77 47.01 53.69 64.59 41.03 57.31 102.78 32.59 26.30 128.99 166.39 158.35 88.25 51.56 52.27 48.30 54.73 36.86 40.87 4 463304 Transcript 0 3.48 5.92 4.64 11.52 3.40 7.78 10.78 3.70 2.89 9.80 17.58 6.30 0.00 10.07 29.67 29.56 3.55 3.65 8.47 0.00 19.21 8.27 8.11 5 454201 Transcript 0 0.00 0.00 0.00 0.00 8.40 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 14.53 0.00 2.40 0.00 0.00 0.00 0.00 0.00 6 417867 Transcript 0 0.00 0.00 1.18 0.53 0.00 0.00 0.00 0.67 0.41 0.19 0.21 0.00 0.00 2.87 2.58 0.99 0.00 0.21 0.00 1.06 0.61 0.23 0.00 7 462137 Transcript 0 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 9 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00 10 E1_Ad KnownBoundary 0 20.37 6.31 0.00 1.50 34.21 2.16 14.49 1.56 1.71 1.67 16.11 0.00 0.00 4.18 52.41 17.17 14.31 2.57 13.55 3.26 21.13 18.49 0.00 11 ER1c ExonRegion 1 10.25 2.48 1.38 0.00 9.53 10.20 9.02 0.00 0.00 1.22 19.63 0.00 0.00 5.18 40.16 14.21 7.74 0.00 7.27 3.26 17.42 9.31 2.84 12 E1_Ae KnownBoundary 0 50.23 23.02 11.41 13.72 17.74 68.20 16.25 3.94 1.42 1.42 55.59 0.00 0.00 29.67 85.67 56.14 24.03 13.22 38.31 8.95 39.60 27.49 29.45 13 ER1d ExonRegion 1 30.21 12.02 4.79 0.00 18.49 28.17 18.66 0.00 0.00 3.34 51.13 0.00 0.43 19.64 121.06 30.53 21.61 0.00 21.72 6.38 45.68 21.21 13.35 14 ER1e ExonRegion 1 74.47 20.12 14.38 3.69 30.70 62.20 42.33 14.28 4.23 12.80 101.68 0.00 4.69 44.79 157.28 84.78 82.35 19.26 59.77 17.36 76.09 29.77 28.67 15 E1_Af KnownBoundary 1 149.66 32.49 29.60 16.61 66.98 99.77 85.63 33.68 10.88 29.49 145.88 0.00 0.00 69.57 134.62 178.07 143.52 83.65 98.45 43.53 89.95 34.54 35.17 16 ER1f ExonRegion 1 18.39 13.22 33.72 20.65 9.38 14.73 11.38 25.24 10.04 26.92 117.70 2.39 8.62 95.04 120.82 131.90 83.86 53.47 60.84 25.40 71.08 29.94 44.28 17 E1a_E2a KnownJunction 0 0.00 0.00 1.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E2b KnownJunction 0 0.00 0.00 0.00 1.23 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E3a KnownJunction 1 2.89 34.73 72.41 47.61 11.97 18.85 14.40 57.54 28.85 43.27 92.81 12.30 12.66 132.26 201.74 321.63 61.99 167.14 158.97 44.74 44.23 33.62 103.29 20 ER2a ExonRegion 0 0.00 0.00 2.04 1.59 0.00 0.00 0.00 2.02 0.00 0.57 0.64 0.00 0.00 6.50 4.84 2.97 0.00 0.62 0.00 1.06 1.84 0.69 0.00 21 ER2b ExonRegion 0 7.71 3.97 5.97 7.48 7.07 6.72 2.62 8.35 3.06 4.36 13.10 3.23 3.45 12.10 14.68 15.85 7.44 6.41 6.28 6.00 11.10 2.37 4.14 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 8.40 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 14.53 0.00 2.40 0.00 0.00 0.00 0.00 0.00 23 E2b_E3a KnownJunction 0 0.00 0.00 0.00 5.96 0.00 0.00 0.00 0.00 0.00 3.87 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 24 ER2c ExonRegion 0 1.48 0.00 4.04 5.18 2.14 0.00 0.13 0.00 0.99 4.59 1.93 0.00 4.69 3.90 0.29 4.46 0.33 0.37 0.32 1.28 0.66 0.63 0.00 25 I2_AR1 ActiveIntronRegion 0 2.12 2.03 1.75 5.45 8.03 3.67 3.78 0.00 0.00 2.13 0.28 4.33 0.00 6.26 12.85 2.97 16.50 5.54 3.19 2.13 0.00 4.17 2.94 26 E3_Aa NovelBoundary 0 0.00 6.12 4.17 7.66 3.48 22.77 1.72 8.54 2.78 7.39 6.79 0.00 6.82 14.07 14.83 7.86 9.16 3.98 4.42 14.64 2.35 0.00 8.71 27 ER3a ExonRegion 0 32.70 16.75 91.19 66.77 71.07 92.18 42.48 64.27 46.58 66.20 147.48 36.27 28.59 168.70 191.39 225.21 101.23 100.06 85.46 59.73 92.82 53.66 62.93 28 E3_Da NovelBoundary 0 20.45 12.63 97.31 62.13 54.41 109.77 66.24 69.00 45.57 55.36 158.25 30.76 21.10 137.15 226.47 175.94 129.03 89.71 49.22 83.03 104.47 38.39 36.02 29 E3a_E4a KnownJunction 0 3.48 5.92 4.64 11.52 3.40 7.78 10.78 3.70 2.89 9.80 17.58 6.30 0.00 10.07 29.67 29.56 3.55 3.65 8.47 0.00 19.21 8.27 8.11 30 E3b_E4a KnownJunction 0 25.71 54.27 108.07 87.47 57.30 159.34 82.85 84.45 44.79 67.69 199.21 37.21 40.91 196.19 264.17 111.77 153.34 82.49 64.94 63.66 113.49 74.64 112.08 31 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER3b ExonRegion 0 19.65 27.09 98.34 70.72 48.64 129.94 60.29 75.31 46.49 56.20 200.61 34.02 28.98 169.14 238.32 150.94 139.58 83.41 65.19 68.01 112.63 61.76 78.66 33 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 34 ER4a ExonRegion 0 105.85 48.76 102.36 91.47 38.07 45.41 49.68 97.77 68.62 82.92 196.20 54.90 38.34 196.85 205.60 230.57 183.05 91.07 86.83 71.70 122.39 73.10 62.91 35 E4_Da KnownBoundary 0 134.76 36.24 87.87 77.21 41.09 34.58 34.01 81.41 50.29 67.93 137.19 45.31 32.14 188.59 220.16 167.73 159.61 71.80 80.19 41.99 77.72 70.11 36.28 36 ER4b ExonRegion 0 93.57 38.46 89.21 80.11 56.39 38.62 50.44 86.87 53.03 64.02 138.25 45.56 25.80 192.64 208.75 186.45 120.36 80.87 66.93 64.35 99.11 45.66 44.12 37 E4_Db KnownBoundary 0 135.95 53.35 94.41 103.78 76.91 72.23 83.60 83.46 62.18 58.45 171.94 42.01 38.80 254.40 328.45 230.03 186.35 94.02 65.32 76.89 95.26 61.66 57.88 38 ER4c ExonRegion 0 53.86 40.74 60.02 74.64 54.77 47.01 53.69 64.59 41.03 57.31 102.78 32.59 26.30 128.99 166.39 158.35 88.25 51.56 52.27 48.30 54.73 36.86 40.87 39 ER5a ExonRegion 0 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29