Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC109586.1 Gene 0 2.63 9.35 11.56 45.52 15.47 46.77 25.31 19.06 20.87 10.82 0.00 0.93 0.34 0.04 0.25 0.17 0.00 33.76 1.75 4.49 1.15 1.14 0.42 2 432518 Transcript 0 3.12 7.48 9.73 40.18 12.17 39.80 25.38 16.89 19.93 10.11 0.00 0.41 0.00 0.00 0.08 0.00 0.00 35.96 1.49 6.06 1.29 0.53 0.26 3 443912 Transcript 0 0.00 0.00 0.00 4.16 2.04 1.89 0.73 2.10 0.45 2.28 0.00 0.76 1.25 0.15 0.67 0.00 0.00 3.92 0.00 0.23 0.00 0.22 0.00 4 445077 Transcript 0 0.00 5.26 6.24 17.45 3.82 0.00 10.25 6.86 3.30 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.47 0.00 3.13 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.74 1.24 4.46 4.08 1.40 2.28 4.07 2.38 3.60 2.54 0.00 0.31 0.00 0.00 0.00 0.00 0.00 4.73 0.56 0.74 0.19 0.18 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 4.02 4.27 1.79 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 0.00 0.00 0.00 4.43 3.57 19.65 2.25 2.55 1.65 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.72 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.31 2.82 7.42 1.23 10.90 3.71 5.05 2.90 3.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.47 1.47 0.80 0.30 0.19 1.08 9 E2_Ab KnownBoundary 0 0.00 3.35 0.00 9.26 0.00 2.90 1.94 7.39 8.36 5.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.96 0.00 0.00 3.03 0.00 0.00 10 E2_Ac KnownBoundary 0 0.00 3.09 4.94 23.97 8.06 64.28 39.97 10.93 16.26 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.57 9.41 3.07 0.00 3.12 0.00 11 ER2b ExonRegion 0 0.00 4.07 2.45 19.72 7.08 46.38 24.84 11.79 18.74 7.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.85 7.12 2.13 2.20 2.08 0.00 12 ER2c ExonRegion 0 0.12 10.68 4.61 34.65 19.32 89.42 37.71 19.93 30.31 13.00 0.00 0.13 0.14 0.00 0.00 2.23 0.00 71.25 6.56 6.20 1.65 0.64 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 3.40 0.00 0.00 0.00 2.55 0.00 2.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 0.00 0.00 0.00 0.00 0.00 14 E2a_E4a KnownJunction 0 0.00 3.35 1.74 33.00 15.62 41.23 18.11 13.31 22.60 10.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.81 4.14 9.46 2.84 0.00 0.00 15 E2a_E5a KnownJunction 0 0.00 5.26 6.24 17.45 3.82 0.00 10.25 6.86 3.30 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.47 0.00 3.13 0.00 0.00 0.00 16 Ix Intron 0 1.09 4.49 4.61 16.82 6.47 3.70 15.21 16.39 11.43 10.29 0.00 0.02 0.02 0.00 0.02 0.00 0.00 4.94 0.87 2.34 0.10 0.06 0.21 17 Ix_SR1 SilentIntronRegion 0 1.09 4.49 4.62 16.83 6.47 3.70 15.22 16.40 11.43 10.29 0.00 0.02 0.02 0.00 0.02 0.00 0.00 4.94 0.87 2.34 0.10 0.06 0.21 18 I2_AR1 ActiveIntronRegion 0 0.00 8.36 7.35 25.29 10.70 11.82 18.83 20.74 14.27 7.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 0.00 0.00 0.00 0.00 19 I2_SR2 SilentIntronRegion 0 0.68 6.89 9.01 26.02 6.39 4.90 20.18 24.55 15.66 8.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.07 0.00 1.39 1.07 0.00 0.35 20 I2_AR2 ActiveIntronRegion 0 0.33 1.80 5.57 21.89 4.10 4.11 20.16 16.00 15.47 8.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.73 0.00 1.66 0.17 0.00 0.29 21 I2_AR5 ActiveIntronRegion 0 9.20 15.17 11.78 53.39 2.68 10.57 36.95 74.17 57.96 45.43 0.00 0.40 0.00 0.00 0.00 0.00 0.00 16.76 1.81 9.84 0.00 0.23 2.18 22 I2_AR7 ActiveIntronRegion 0 1.82 4.75 7.58 28.01 12.13 12.72 18.70 15.30 10.96 5.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.91 1.33 0.00 0.60 0.00 23 I2_AR8 ActiveIntronRegion 0 3.64 7.40 3.68 27.22 16.21 5.60 17.44 13.32 12.79 5.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.25 1.83 0.41 0.42 0.40 0.00 24 E3_Aa NovelBoundary 0 9.56 5.59 21.02 40.52 0.00 11.13 20.31 20.58 34.35 7.76 2.47 17.71 0.00 0.00 5.07 8.29 13.28 25.74 8.09 35.54 5.37 8.82 4.35 25 ER3a ExonRegion 0 0.00 0.00 0.00 7.09 6.11 2.84 2.18 3.76 1.34 2.66 0.00 2.29 3.75 0.44 2.02 0.00 0.00 7.46 0.00 0.70 0.00 0.66 0.00 26 E3a_E5a KnownJunction 0 0.00 0.00 0.00 2.00 0.00 2.84 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4_Aa NovelBoundary 0 6.37 0.00 7.10 19.91 28.10 25.89 29.15 7.43 9.92 9.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.65 0.00 6.52 0.00 0.00 0.00 28 ER4a ExonRegion 0 3.86 8.49 10.61 66.06 10.55 50.13 27.43 25.74 35.06 15.43 0.00 2.59 0.00 0.00 0.00 0.00 0.00 64.36 1.74 9.33 1.38 1.07 0.00 29 E4a_E5a KnownJunction 0 10.45 15.19 24.95 82.61 16.21 60.02 61.87 34.63 37.35 19.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92.61 0.00 12.02 2.84 0.00 0.00 30 ER5a ExonRegion 0 1.11 13.06 24.53 86.99 39.63 123.61 51.31 38.34 33.06 20.83 0.00 2.83 0.00 0.00 0.00 0.60 0.00 67.49 1.22 8.30 1.09 2.48 0.00 31 E5a_E6a KnownJunction 0 0.00 12.83 41.01 102.22 8.57 117.26 22.13 33.80 35.47 21.46 0.00 18.91 0.00 0.00 0.00 4.36 0.00 103.72 0.00 13.74 5.68 2.45 0.00 32 ER6a ExonRegion 0 6.43 24.97 29.67 127.15 26.60 85.81 48.29 52.00 51.30 26.60 0.00 0.90 0.00 0.00 0.00 0.38 0.00 96.66 3.51 6.68 3.75 2.52 1.59 33 E6_Da KnownBoundary 0 10.59 45.39 31.37 131.59 70.20 158.83 93.54 60.75 70.63 22.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 147.53 9.60 6.33 5.25 3.06 0.00 34 ER6b ExonRegion 0 10.33 29.56 17.62 89.34 51.44 99.56 76.70 37.64 46.17 15.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77.16 4.78 6.27 4.67 3.48 2.58 35 E6_Db KnownBoundary 0 3.11 26.64 6.59 55.80 34.38 65.76 68.36 12.53 19.65 7.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.78 4.05 11.38 5.87 5.27 0.00 36 ER6c ExonRegion 0 6.81 23.75 23.53 88.09 40.19 111.56 58.49 32.88 36.19 17.69 0.00 0.00 0.00 0.00 0.58 0.00 0.00 15.73 2.50 10.09 1.46 2.26 0.71 37 IG32_AR1 ActiveIntergenicRegion 0 6.65 11.09 31.86 128.06 29.86 61.88 47.05 51.71 41.56 22.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.83 1.63 9.28 0.57 2.41 0.75