Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC090937.1 Gene 0 162.26 423.72 155.16 239.62 230.11 231.90 321.14 240.83 170.28 156.44 193.55 185.11 151.77 204.12 135.93 178.83 157.54 290.18 231.82 282.82 191.12 291.63 174.41 2 426200 Transcript 0 23.56 44.93 3.52 32.93 40.92 68.82 92.87 29.29 9.26 29.87 24.32 0.00 6.82 19.01 0.00 6.84 18.89 96.92 59.39 76.32 41.58 26.51 31.07 3 430166 Transcript 0 2.22 0.47 1.00 0.84 1.34 2.24 0.72 1.09 3.54 2.95 0.59 0.40 0.43 0.14 0.35 0.06 0.01 1.42 1.00 0.72 1.86 1.27 0.50 4 417835 Transcript 0 0.01 0.34 0.01 0.77 0.03 0.06 0.03 2.17 0.01 0.03 1.56 0.08 0.64 1.37 0.00 0.02 2.61 2.34 2.21 0.01 0.02 0.03 0.01 5 424349 Transcript 0 94.48 226.62 93.90 128.12 127.69 177.61 184.53 156.23 102.12 98.68 98.66 98.36 99.58 130.12 80.45 96.55 117.89 134.54 119.65 177.00 131.76 167.98 95.32 6 440079 Transcript 1 0.00 6.97 0.00 7.42 3.40 14.59 10.82 14.29 6.86 12.65 0.00 0.00 26.62 17.66 4.45 20.17 12.16 37.85 8.38 37.97 6.80 12.25 0.00 7 ER1a ExonRegion 0 4.51 14.38 5.02 7.18 10.05 21.78 23.03 8.62 5.27 8.62 13.84 0.44 0.20 11.79 4.24 6.84 14.18 52.54 27.22 28.19 16.96 13.67 17.88 8 E1a_E4a KnownJunction 0 23.56 44.93 3.52 32.93 40.92 68.82 92.87 29.29 9.26 29.87 24.32 0.00 6.82 19.01 0.00 6.84 18.89 96.92 59.39 76.32 41.58 26.51 31.07 9 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.03 0.68 0.02 0.15 0.07 0.12 0.07 0.40 0.02 0.05 0.91 0.17 1.27 0.26 0.00 0.04 0.45 0.50 0.37 0.03 0.04 0.07 0.02 11 E2a_E4a KnownJunction 0 0.00 0.00 0.00 1.40 0.00 0.00 0.00 3.94 0.00 0.00 2.21 0.00 0.00 2.47 0.00 0.00 4.77 4.19 4.05 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 0 0.00 0.68 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 2.71 0.00 1.98 0.00 0.00 0.00 3.55 0.00 0.00 0.00 13 ER3b ExonRegion 0 12.24 43.70 18.93 19.93 18.58 46.14 35.69 31.94 38.72 37.07 62.86 25.56 28.24 101.12 33.53 74.83 79.19 89.03 41.58 111.46 118.70 61.33 55.68 14 E3_Da NovelBoundary 1 6.74 50.91 44.26 37.86 30.56 123.00 82.10 50.11 73.06 54.07 38.85 25.06 73.70 153.16 17.80 56.48 105.38 92.48 56.47 172.00 163.34 77.52 34.83 15 E3a_E4a KnownJunction 1 0.00 6.97 0.00 7.42 3.40 14.59 10.82 14.29 6.86 12.65 0.00 0.00 26.62 17.66 4.45 20.17 12.16 37.85 8.38 37.97 6.80 12.25 0.00 16 E3b_E4a KnownJunction 0 20.45 85.31 43.61 40.35 48.05 168.65 105.64 91.55 61.11 64.76 66.65 43.21 56.17 91.12 38.20 65.03 132.87 105.00 60.24 132.76 144.25 102.75 73.24 17 ER3c ExonRegion 1 11.59 67.90 36.39 40.77 31.18 136.10 77.60 74.92 58.10 60.59 52.27 35.39 74.22 128.80 27.62 68.23 119.26 85.40 62.05 147.64 146.50 89.59 57.07 18 I3 Intron 1 31.08 131.18 23.58 39.68 31.04 30.05 46.26 28.20 54.42 25.78 33.96 38.88 39.11 69.99 17.86 51.05 24.45 32.54 21.92 81.60 16.03 21.44 15.59 19 I3_AR1 ActiveIntronRegion 1 31.12 131.35 23.61 39.73 31.08 30.09 46.32 28.24 54.49 25.81 34.00 38.93 39.16 70.07 17.88 51.11 24.48 32.58 21.95 81.71 16.04 21.47 15.61 20 E4_Aa NovelBoundary 0 48.97 165.56 45.47 99.52 18.85 70.02 103.91 78.29 94.36 40.32 49.75 80.28 74.51 90.71 33.25 108.18 61.24 43.15 44.52 124.57 14.15 16.10 28.60 21 ER4a ExonRegion 0 117.82 491.41 153.50 287.33 244.95 262.92 383.30 251.12 221.88 194.55 320.97 253.19 185.18 309.51 128.54 291.71 259.97 541.85 336.43 419.83 353.84 392.10 270.95 22 E4_Da KnownBoundary 0 162.33 798.54 166.91 328.13 354.07 256.05 475.50 336.85 228.09 201.17 303.13 270.99 196.58 327.33 190.62 253.35 231.42 277.12 303.82 479.51 193.05 645.71 220.15 23 ER4b ExonRegion 0 99.35 485.15 149.33 219.31 213.13 266.04 396.63 192.87 153.89 147.40 218.92 163.79 142.12 247.21 149.14 228.73 169.27 464.68 302.23 330.13 214.47 321.59 240.00 24 E4_Db KnownBoundary 0 110.98 321.00 47.37 42.45 96.86 181.26 256.54 55.53 51.53 75.40 103.03 29.56 27.11 88.88 68.48 140.13 80.13 120.80 161.89 138.00 109.41 159.64 103.63 25 E4_Dc KnownBoundary 1 91.50 434.73 53.87 83.24 110.27 189.95 385.98 103.10 109.52 70.32 229.32 50.87 31.82 173.76 63.29 136.03 188.22 169.09 149.46 210.03 205.66 315.29 113.28 26 ER4c ExonRegion 1 99.15 433.00 68.06 77.79 105.38 223.58 347.49 128.44 114.11 94.84 211.58 51.62 38.24 210.39 95.52 154.55 177.99 197.14 197.00 221.60 193.93 321.18 134.18 27 ER4d ExonRegion 0 345.88 752.59 295.59 431.37 431.53 405.67 554.87 457.29 289.26 269.38 275.73 314.83 267.95 297.86 255.96 250.96 219.42 347.75 356.34 424.05 236.29 479.56 250.97 28 I4_AR2 ActiveIntronRegion 0 69.76 16.15 11.15 4.34 4.87 1.64 2.02 2.36 4.76 3.13 0.00 0.00 0.98 0.00 0.63 0.00 0.00 0.00 2.98 1.30 0.00 3.82 3.59 29 E5_Aa NovelBoundary 0 79.94 46.04 47.78 31.13 42.61 53.09 23.45 36.51 44.18 17.06 0.00 0.00 0.00 2.47 0.00 0.00 0.00 3.65 72.28 26.85 13.71 29.02 19.29 30 ER5a ExonRegion 0 2.52 0.00 0.89 3.43 1.12 1.53 1.67 0.06 2.56 1.75 0.02 0.00 0.00 0.00 0.00 0.00 0.05 4.41 1.33 1.78 0.61 1.06 0.00 31 E5a_E6a KnownJunction 0 2.89 3.22 1.30 0.00 0.00 0.00 0.00 0.00 1.74 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.64 0.00 0.00 5.87 2.57 0.00 32 ER6a ExonRegion 0 2.30 0.80 1.74 1.19 1.29 2.75 0.52 1.82 6.13 2.22 0.00 0.00 0.00 0.00 0.40 0.59 0.00 2.27 1.89 0.84 2.94 1.33 0.58 33 E6_Da NovelBoundary 0 24.45 21.77 50.97 25.01 23.94 18.91 6.01 25.06 41.17 9.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.05 49.98 28.38 26.07 5.76 8.11 34 E6a_E7a KnownJunction 0 3.56 0.00 0.00 0.00 4.33 8.40 0.00 2.42 5.18 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 3.12 0.00 35 ER7a ExonRegion 0 1.73 0.00 0.90 1.05 0.75 5.77 0.65 0.47 2.60 2.46 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.61 1.58 1.44 36 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.99 2.82 2.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER8a ExonRegion 0 2.14 0.69 3.08 2.02 0.90 1.24 0.89 2.51 2.97 5.49 0.73 0.11 0.00 0.00 0.00 0.00 0.00 1.86 3.23 1.48 3.04 0.70 2.98 38 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 4.69 4.30 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E9_Aa NovelBoundary 0 246.64 135.96 137.04 203.30 178.01 84.27 317.49 178.59 136.92 167.83 36.64 41.41 26.46 25.43 36.22 139.54 101.54 150.77 121.98 136.53 111.51 78.75 108.58 40 ER9a ExonRegion 0 7.09 0.00 2.04 0.76 4.98 2.73 3.45 2.03 3.54 3.00 0.10 3.86 4.31 1.35 3.05 0.00 0.00 1.03 3.56 3.12 2.40 2.33 0.00