Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AC034193.4	Gene	0	1.48	4.91	2.88	3.71	2.90	0.86	4.67	2.47	1.31	1.50	2.89	6.94	3.97	5.22	4.03	5.22	4.40	3.16	1.88	7.10	0.67	0.74	1.01
2	366264	Transcript	0	1.26	0.83	1.15	1.38	0.00	0.00	0.71	0.84	0.88	0.42	3.54	0.00	2.76	6.47	3.26	2.79	4.43	1.52	0.00	0.52	0.00	0.92	0.00
3	326237	Transcript	0	0.03	0.01	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.12	0.00	0.13	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	440568	Transcript	0	6.77	19.03	18.20	11.16	6.44	1.05	12.23	8.57	6.01	5.29	11.53	30.03	18.25	21.13	19.25	32.38	26.72	10.67	10.30	24.21	4.08	7.13	2.63
5	438698	Transcript	0	2.17	7.45	4.56	7.14	6.10	1.87	8.93	5.10	2.80	2.99	5.20	12.82	6.41	7.07	4.81	6.32	5.81	5.44	2.79	13.10	0.75	1.05	1.18
6	424904	Transcript	0	0.53	0.76	2.30	2.56	1.00	0.00	1.16	1.30	1.39	1.43	1.45	3.79	2.93	8.53	5.08	3.34	3.71	1.15	0.00	2.13	0.28	0.78	0.73
7	430621	Transcript	0	0.29	0.00	0.25	0.01	0.04	0.00	0.37	0.36	0.51	0.00	0.27	0.49	0.00	0.00	3.49	0.41	0.00	0.00	0.00	0.00	1.19	0.00	0.38
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	0.00	0.00	0.00	0.00	1.57	0.00	0.00	0.00
9	ER1b	ExonRegion	0	0.71	1.02	1.32	0.34	0.81	0.62	0.67	0.43	0.56	0.00	0.32	1.20	1.30	2.15	4.32	1.00	2.22	0.31	0.52	1.33	0.00	0.35	0.99
10	E1_Ac	KnownBoundary	0	184.11	118.40	80.42	90.66	151.95	98.64	159.78	77.22	58.82	43.27	29.17	11.25	25.49	9.30	26.58	105.27	69.66	55.80	80.47	97.54	27.18	61.60	90.40
11	ER1c	ExonRegion	0	3.20	5.69	4.68	1.61	6.88	0.00	6.43	0.53	1.46	0.47	4.46	14.23	3.06	5.50	14.68	11.40	4.99	1.43	2.21	1.22	0.00	0.55	0.66
12	E1a_E2a	KnownJunction	0	2.96	8.55	11.50	2.06	0.00	0.00	3.36	1.60	2.84	1.24	9.42	25.21	0.00	10.42	17.06	19.82	13.00	1.62	8.66	0.00	0.00	0.00	0.00
13	E1a_E2c	KnownJunction	0	0.00	0.00	1.63	0.00	0.00	0.00	2.12	0.00	0.00	0.00	2.63	0.00	8.28	7.06	5.19	4.36	0.00	1.99	0.00	0.00	0.00	0.00	0.00
14	E1a_E4b	NovelJunction	0	3.78	6.71	7.27	3.76	0.00	8.01	11.97	0.00	0.00	4.41	2.68	6.30	6.82	4.89	10.75	0.00	0.00	1.82	9.32	2.94	0.00	0.00	0.00
15	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	Ix	Intron	0	16.71	42.15	29.84	35.64	14.67	6.23	31.95	20.91	10.09	16.68	14.84	28.32	24.66	28.45	24.99	29.99	33.31	49.20	14.32	48.54	3.14	2.74	4.19
17	Ix_AR1	ActiveIntronRegion	0	8.47	17.29	6.13	4.09	8.92	1.83	4.63	1.73	3.71	1.15	5.80	7.22	0.78	5.68	15.96	3.47	16.50	13.24	9.56	14.89	2.20	0.00	0.00
18	Ix_SR2	SilentIntronRegion	0	17.97	45.57	32.62	39.06	15.84	6.86	35.12	22.97	10.88	18.35	16.01	31.11	27.23	31.25	26.93	32.88	36.03	53.58	15.28	52.68	3.30	3.03	4.62
19	E2_Aa	NovelBoundary	0	29.41	94.52	52.60	114.00	23.60	14.88	69.07	57.83	24.83	47.22	29.32	103.98	59.25	86.76	57.11	104.33	52.73	86.18	54.40	96.58	6.30	13.78	22.79
20	ER2a	ExonRegion	0	17.33	48.53	34.45	25.53	11.33	3.14	33.33	19.55	10.95	11.30	23.11	52.72	48.41	45.55	35.36	61.52	58.10	28.04	22.23	69.36	9.70	10.79	7.90
21	E2a_E2c	NovelJunction	0	3.78	68.61	55.11	50.34	32.00	18.74	116.72	29.00	25.81	22.73	49.33	61.52	54.22	61.57	4.45	27.51	66.85	60.15	26.07	74.53	3.09	18.31	4.01
22	E2a_E4b	KnownJunction	0	0.00	0.00	8.66	5.89	7.98	0.00	0.00	4.56	4.25	3.33	2.05	12.15	6.33	7.42	5.32	15.81	9.07	2.36	0.00	3.26	2.53	10.59	0.00
23	ER2b	ExonRegion	0	2.12	4.07	8.58	13.63	5.35	1.83	18.54	5.19	8.65	5.73	5.80	17.32	14.07	12.99	23.21	20.80	19.81	7.39	0.00	14.89	2.20	6.25	0.00
24	ER2c	ExonRegion	0	0.00	4.07	1.23	5.45	5.35	1.83	22.51	0.00	0.00	1.15	5.80	17.32	9.38	8.12	11.61	14.86	3.30	5.54	3.19	0.00	0.00	2.08	0.00
25	ER2d	ExonRegion	0	7.92	54.30	13.84	31.66	24.27	5.50	42.51	18.09	5.15	8.48	21.11	50.28	37.61	59.96	33.32	45.05	39.06	23.31	12.84	62.33	2.23	3.40	10.09
26	E2_Db	NovelBoundary	0	42.90	84.26	70.28	97.16	48.39	10.28	76.40	48.51	14.84	35.48	44.64	93.63	103.08	53.56	34.12	163.29	80.41	75.98	52.80	132.05	6.24	11.88	16.56
27	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E2b_E4b	KnownJunction	0	3.78	2.50	1.83	4.13	0.00	0.00	0.00	2.51	2.63	1.26	8.00	0.00	0.00	12.36	0.00	4.02	13.28	2.57	0.00	0.00	0.00	2.76	0.00
29	Ix	Intron	0	13.64	63.54	36.84	47.24	20.62	9.25	48.23	27.42	10.32	13.89	30.06	66.48	48.51	36.47	32.33	36.23	37.93	30.70	12.50	75.12	1.85	8.47	8.23
30	Ix_SR1	SilentIntronRegion	0	13.71	63.88	37.04	47.49	20.73	9.30	48.49	27.57	10.37	13.97	30.22	66.83	48.78	36.66	32.51	36.43	38.14	30.87	12.57	75.51	1.86	8.51	8.27
31	E3_Aa	NovelBoundary	0	24.60	92.55	29.48	78.54	61.71	26.12	84.70	37.83	12.64	30.35	23.27	87.03	88.47	53.45	37.46	43.83	23.09	17.95	17.41	62.32	0.00	23.21	0.00
32	ER3a	ExonRegion	0	6.11	16.58	16.57	17.49	14.16	0.00	21.63	16.00	5.31	8.15	14.84	49.46	23.49	14.89	16.78	19.99	22.11	9.66	3.07	38.00	2.12	1.00	4.24
33	E3_Da	NovelBoundary	0	31.34	102.42	40.18	57.57	23.26	22.37	90.71	46.13	18.87	22.08	23.01	99.63	40.42	55.15	27.07	29.82	50.12	14.84	18.17	65.90	3.09	10.04	24.07
34	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	Ix	Intron	0	3.80	33.35	15.59	31.48	6.01	1.65	6.25	12.73	9.51	16.13	12.59	19.38	10.10	8.71	6.63	15.36	16.32	21.07	2.86	30.12	0.99	0.94	5.94
36	Ix_SR1	SilentIntronRegion	0	3.84	33.65	15.72	31.75	6.07	1.66	6.28	12.84	9.60	16.27	12.70	19.55	10.17	8.78	6.69	15.48	16.46	21.25	2.89	30.38	1.00	0.94	5.98
37	E4_Aa	NovelBoundary	0	24.52	17.89	23.59	42.35	20.88	11.07	49.86	35.65	1.59	15.93	26.90	31.96	14.12	11.83	24.23	37.60	26.93	22.92	9.60	36.18	2.97	3.12	7.51
38	E4_Ab	NovelBoundary	0	7.41	0.00	14.19	13.48	4.07	8.52	2.25	16.55	0.00	3.04	0.00	7.50	0.00	0.00	0.00	17.35	8.88	25.78	0.00	9.78	0.00	0.00	0.00
39	ER4a	ExonRegion	0	0.53	0.76	2.30	2.56	1.00	0.00	1.16	1.30	1.39	1.43	1.45	3.79	2.93	8.53	5.08	3.34	3.71	1.15	0.00	2.13	0.28	0.78	0.73
40	ER4b	ExonRegion	0	2.06	0.58	9.98	7.05	7.03	0.00	1.59	2.62	3.11	3.97	7.90	13.85	6.16	18.75	19.07	12.23	13.68	2.16	2.73	5.53	0.57	3.57	3.19
41	E4a_E7a	KnownJunction	0	0.00	0.00	6.98	2.06	4.16	0.00	1.99	2.05	0.00	1.67	5.37	6.30	6.82	2.41	4.94	4.36	0.00	6.76	8.47	3.00	0.00	0.00	4.35
42	E4a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	3.65	0.00	0.00	0.00	1.45	0.00	12.79	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.27
43	E4_Db	NovelBoundary	0	0.00	22.63	46.12	30.53	17.06	12.78	26.32	21.60	10.53	12.87	11.95	47.57	22.89	16.42	5.69	18.03	25.15	28.40	4.24	40.97	5.93	5.88	12.21
44	E4b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER4c	ExonRegion	0	0.00	4.07	2.45	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.25	0.00	0.00	3.30	1.85	0.00	6.38	0.00	0.00	0.00
46	Ix	Intron	0	12.85	37.22	21.83	22.77	12.51	4.20	22.84	16.83	6.44	9.05	10.47	26.02	18.80	17.25	14.69	18.41	13.91	27.72	7.30	29.12	1.57	2.00	5.27
47	Ix_SR1	SilentIntronRegion	0	12.86	37.26	21.85	22.79	12.53	4.21	22.86	16.85	6.45	9.06	10.49	26.06	18.82	17.27	14.70	18.43	13.92	27.75	7.31	29.16	1.57	2.00	5.28
48	E5_Aa	NovelBoundary	0	8.74	25.19	40.18	49.38	22.41	5.05	44.65	29.33	16.00	17.73	35.27	81.18	19.64	26.72	14.83	16.83	21.32	19.11	20.42	69.86	5.62	11.57	4.35
49	ER5a	ExonRegion	0	2.49	10.11	9.08	28.23	7.99	7.85	17.12	9.19	4.59	7.31	7.58	14.35	9.97	10.01	5.36	6.36	9.37	14.47	7.95	14.43	0.79	2.23	3.14
50	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	4.24	0.00	1.85	0.00	1.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	Ix	Intron	0	7.95	28.93	18.11	27.02	17.31	7.12	38.33	14.75	9.86	12.11	17.62	47.29	22.59	25.77	17.21	22.15	19.11	13.55	9.03	46.65	2.17	4.75	5.43
52	Ix_SR1	SilentIntronRegion	0	7.96	28.97	18.13	27.05	17.33	7.12	38.37	14.77	9.87	12.12	17.64	47.35	22.62	25.80	17.23	22.18	19.13	13.57	9.04	46.71	2.17	4.75	5.43
53	E6_Aa	NovelBoundary	0	0.00	11.91	8.22	9.82	8.32	2.38	20.58	10.84	2.95	13.78	13.85	6.30	6.66	13.19	6.30	4.27	13.09	6.59	0.00	27.16	0.00	0.00	8.71
54	ER6a	ExonRegion	0	8.77	28.81	8.41	10.06	22.39	7.14	30.83	13.68	11.08	8.47	19.17	38.78	9.84	28.40	16.32	24.21	11.69	17.53	11.28	45.97	3.12	5.17	2.08
55	E6_Da	NovelBoundary	0	20.15	39.34	22.97	24.61	49.75	31.63	49.37	21.93	10.71	21.65	32.80	92.28	31.65	37.91	15.08	43.92	44.04	24.66	0.00	68.84	0.00	2.76	4.10
56	Ix	Intron	0	15.14	34.64	21.48	19.31	17.03	6.66	30.37	13.69	5.96	10.47	17.92	35.78	20.58	18.91	16.44	25.48	18.99	25.22	10.94	38.06	2.80	5.38	5.27
57	Ix_SR1	SilentIntronRegion	0	15.05	35.89	22.37	18.57	15.38	6.43	29.57	12.27	5.43	9.65	18.13	36.68	16.63	19.50	17.01	25.92	20.06	24.69	10.68	35.88	2.78	5.04	4.81
58	Ix_AR1	ActiveIntronRegion	0	15.82	26.66	15.77	24.29	28.00	8.23	35.85	23.11	9.48	15.90	16.70	30.08	46.78	15.19	12.84	22.71	12.06	28.88	12.71	52.66	2.93	7.61	8.30
59	Ix	Intron	0	19.14	30.14	18.35	8.67	12.77	8.29	15.97	10.35	5.09	12.45	24.28	15.42	13.65	26.09	20.28	32.11	25.71	58.39	20.01	42.23	6.09	3.14	8.85
60	Ix_SR1	SilentIntronRegion	0	19.32	30.43	18.53	8.75	12.89	8.38	16.12	10.46	5.14	12.58	24.52	15.55	13.79	26.35	20.48	32.43	25.96	58.95	20.21	42.64	6.15	3.17	8.93
61	ER7a	ExonRegion	0	2.07	4.07	6.48	2.50	3.82	0.00	1.00	1.73	0.00	2.13	4.14	5.92	3.16	3.65	2.55	2.18	3.44	4.56	4.68	5.69	0.00	0.04	1.26
62	E7_Da	KnownBoundary	0	3.63	2.70	15.08	7.19	4.33	0.00	0.00	3.66	2.75	9.54	4.47	0.00	13.47	2.12	0.00	7.95	0.00	19.98	0.00	0.00	0.00	0.00	0.00
63	ER7b	ExonRegion	0	0.33	0.43	1.03	0.41	0.41	0.00	0.20	0.44	0.00	0.35	0.59	1.64	0.93	0.25	0.00	3.10	0.51	2.25	0.00	0.33	0.00	0.00	0.45
64	E7_Db	KnownBoundary	0	3.63	0.00	2.48	0.00	0.00	0.00	0.00	4.35	0.00	2.31	0.00	0.00	6.82	0.00	0.00	3.59	0.00	15.13	0.00	0.00	0.00	0.00	7.51
65	E7_Dc	KnownBoundary	0	0.00	2.43	0.00	6.09	11.97	2.50	2.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.29	4.77	12.93	0.00	0.00	0.00	0.00	0.00
66	ER7c	ExonRegion	0	0.00	2.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER7d	ExonRegion	0	0.09	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.38	0.00	0.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	E7_Ab	KnownBoundary	0	3.04	2.63	1.54	5.39	4.07	0.00	0.00	2.55	2.81	1.16	2.32	0.00	0.00	0.00	0.00	0.00	0.00	1.70	0.00	0.00	0.00	0.00	0.00
69	ER7e	ExonRegion	0	0.00	0.00	0.19	0.41	0.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.14	0.12	0.30	0.00	0.00	0.00	0.00	0.25	0.00	0.02
70	E7_Dd	KnownBoundary	0	0.00	3.35	3.34	0.00	0.00	0.00	0.00	2.26	1.30	1.48	12.79	0.00	7.30	0.00	0.00	7.18	4.30	3.73	0.00	2.43	2.78	0.00	0.00
71	E7d_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	ER7f	ExonRegion	0	0.00	0.00	0.19	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E7_De	NovelBoundary	0	68.98	119.58	105.32	55.90	59.34	31.40	68.19	36.23	19.13	36.26	13.90	11.70	6.01	20.25	10.75	33.50	28.33	59.07	47.06	69.22	11.49	5.57	15.19
74	Ix	Intron	0	79.07	120.88	151.18	96.97	73.98	38.76	57.17	72.02	25.11	49.02	45.49	38.84	29.62	50.90	45.01	74.92	46.23	135.44	42.01	69.58	16.02	18.26	21.62
75	Ix_AR1	ActiveIntronRegion	0	8.47	22.37	18.38	10.90	42.81	1.83	17.21	3.46	0.00	6.88	13.53	0.00	0.00	4.87	5.80	5.94	9.90	16.63	0.00	19.15	0.00	4.17	0.00
76	Ix_SR1	SilentIntronRegion	0	17.26	28.94	29.79	14.99	51.05	17.77	29.43	5.85	1.14	6.79	16.36	7.66	5.05	20.49	7.14	8.92	22.85	19.61	7.11	15.38	8.14	3.85	3.61
77	Ix_AR2	ActiveIntronRegion	0	81.59	127.28	158.34	100.15	67.88	35.70	55.44	73.55	26.43	50.88	46.45	40.44	31.59	52.80	45.76	75.21	46.13	144.85	42.10	72.20	17.18	19.16	21.88
78	Ix_SR2	SilentIntronRegion	0	62.79	69.63	96.61	76.93	140.57	73.70	79.58	66.43	15.20	36.39	40.22	27.33	13.31	36.42	43.11	81.99	51.15	56.76	46.49	51.09	5.48	11.28	21.77
79	E8_Aa	NovelBoundary	0	34.08	42.36	63.72	43.82	4.33	4.88	27.16	53.44	21.47	40.02	36.11	0.00	6.17	20.43	22.25	16.06	42.92	24.71	20.89	41.03	40.40	16.66	12.98
80	ER8a	ExonRegion	0	0.59	0.00	0.51	0.03	0.09	0.00	0.73	0.71	1.02	0.00	0.54	0.99	0.00	0.00	2.52	0.82	0.00	0.00	0.00	0.00	2.37	0.00	0.75