Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYD88 Gene 0 171.02 37.21 85.05 42.43 92.06 62.30 79.63 100.51 50.74 51.20 294.75 141.92 188.18 446.38 319.44 428.60 248.07 89.90 80.03 66.75 124.28 158.21 111.59 2 396334 Transcript 0 0.00 0.00 0.00 0.00 0.00 4.35 2.44 0.00 0.00 0.00 0.00 0.87 0.00 3.25 0.00 3.37 3.21 6.85 3.70 2.41 1.50 0.00 0.00 3 424893 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 416282 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 460295 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 495303 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 2.78 0.00 2.05 0.00 0.00 2.30 10.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 443433 Transcript 0 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 11.95 4.45 7.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 415158 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 417037 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 421571 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 421516 Transcript 0 0.00 0.00 1.83 0.00 0.00 3.12 4.15 2.34 1.50 1.24 5.00 0.00 0.00 2.47 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 12 481122 Transcript 0 3.52 0.00 0.38 0.01 0.56 1.94 1.96 0.50 1.55 0.00 1.63 1.50 3.95 16.50 10.90 8.77 4.77 0.97 2.01 1.35 0.46 3.08 1.86 13 484513 Transcript 0 17.30 1.85 2.52 0.82 6.25 5.74 3.53 9.01 7.14 4.61 21.33 4.70 4.09 39.84 22.14 46.90 24.63 5.09 3.65 6.94 7.21 6.82 7.55 14 463956 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 4.35 2.44 0.00 0.00 0.00 0.00 0.87 0.00 3.25 0.00 3.37 3.21 6.85 3.70 2.41 1.50 0.00 0.00 16 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.05 3.97 0.00 0.00 0.00 0.00 6.75 0.00 2.24 0.00 6.92 8.51 16.37 4.42 5.18 0.00 0.00 0.00 17 ER1b ExonRegion 0 0.26 0.00 0.57 0.65 0.00 2.96 3.48 0.26 0.84 0.23 1.19 1.57 0.00 4.40 0.88 2.13 3.60 4.76 2.12 3.22 4.21 0.40 2.25 18 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.42 2.51 0.00 1.40 0.00 0.00 0.00 2.47 0.00 4.36 0.00 3.98 0.00 3.26 0.00 0.00 0.00 19 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E1_Ag KnownBoundary 0 29.04 7.89 3.10 3.03 7.05 24.76 15.41 7.97 5.87 2.69 34.38 0.00 0.00 44.85 14.09 36.49 49.65 11.65 3.39 12.98 46.27 34.90 39.69 23 ER1c ExonRegion 0 10.94 2.03 3.68 2.73 0.00 22.01 11.92 3.46 5.15 1.15 19.65 0.00 0.00 74.71 15.47 25.76 40.16 7.39 1.06 12.77 35.26 15.28 31.81 24 ER1d ExonRegion 1 20.11 6.10 3.68 2.73 2.68 23.38 18.54 5.19 6.18 2.29 29.96 0.00 0.00 91.76 23.21 33.44 42.91 11.09 3.19 13.83 47.38 31.77 44.05 25 ER1e ExonRegion 1 21.17 6.10 3.68 2.73 2.68 25.67 18.54 5.19 6.18 2.29 30.93 0.00 0.00 99.07 26.11 35.67 46.21 11.09 3.19 14.89 50.69 35.42 46.99 26 ER1f ExonRegion 1 21.17 6.10 3.68 2.73 2.68 25.67 19.42 5.19 7.00 2.29 30.93 0.00 0.00 102.86 29.98 35.67 47.31 11.09 3.19 14.89 50.69 35.42 52.86 27 ER1g ExonRegion 1 19.73 6.18 16.03 9.30 11.26 19.05 19.39 23.71 15.86 13.23 123.48 20.00 9.48 212.58 128.37 164.58 110.88 45.68 25.65 33.02 80.26 61.93 52.88 28 E1a_E3c KnownJunction 1 37.71 27.63 32.88 16.61 44.82 59.28 88.33 80.26 32.46 35.67 289.23 56.87 42.37 391.67 232.15 286.51 230.76 96.34 51.77 67.37 134.55 94.91 63.85 29 E1a_E3e KnownJunction 0 0.00 0.00 1.83 1.40 3.48 0.00 7.68 9.08 1.59 0.00 12.42 0.00 18.18 9.95 5.19 3.42 7.85 1.99 0.00 3.20 0.00 8.70 4.35 30 E1a_E3f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 2.78 0.00 2.05 0.00 0.00 2.30 10.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER2a ExonRegion 0 7.05 0.00 0.77 0.02 1.13 3.88 3.92 1.00 3.10 0.00 3.26 3.01 7.91 30.87 21.80 17.54 9.55 1.94 4.03 2.69 0.93 6.16 3.71 32 E2a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER3a ExonRegion 0 15.99 3.34 4.17 0.93 6.29 5.88 3.06 11.31 7.05 3.97 28.77 8.62 5.16 40.43 12.37 42.36 26.23 3.65 4.83 8.08 4.41 6.72 9.86 34 E3_Ab KnownBoundary 0 13.48 5.85 3.61 1.63 4.33 0.00 2.25 21.36 13.40 4.14 25.69 18.76 6.66 50.68 24.85 46.06 36.65 7.25 4.80 16.87 7.97 6.18 14.17 35 ER3b ExonRegion 0 20.05 1.93 2.94 1.98 5.62 5.78 1.85 11.45 8.31 2.84 15.70 8.12 5.28 29.60 17.70 41.61 37.96 6.01 6.21 9.20 4.79 4.74 12.41 36 E3_Da KnownBoundary 0 21.04 0.00 1.83 1.96 4.24 6.81 3.80 1.77 3.70 2.77 19.11 0.00 6.82 20.95 22.75 53.32 36.56 11.81 9.60 2.43 2.47 2.27 7.85 37 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER3c ExonRegion 0 18.62 0.36 0.88 0.70 6.21 5.59 4.00 6.71 7.23 5.24 13.90 0.77 3.02 39.25 31.91 51.45 23.03 6.53 2.46 5.80 10.02 6.92 5.24 39 E3_Ac KnownBoundary 0 44.97 0.00 0.00 0.00 10.87 13.51 6.23 7.56 11.20 4.94 19.79 0.00 6.66 55.27 33.38 80.24 27.30 1.62 0.00 6.33 12.29 5.76 3.50 40 ER3d ExonRegion 1 80.74 24.38 45.06 21.98 46.16 53.39 60.66 70.51 40.48 45.12 319.78 88.85 68.33 444.86 213.87 333.99 271.95 97.80 66.97 83.29 168.01 133.06 68.84 41 E3_Db KnownBoundary 1 114.24 32.10 78.62 27.50 42.28 29.30 53.13 70.77 56.77 63.80 283.44 58.52 39.93 386.49 224.37 399.04 234.50 125.65 75.11 115.37 210.29 112.36 102.78 42 E3b_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER3e ExonRegion 1 97.77 30.74 66.08 29.14 37.15 41.68 43.49 61.36 52.92 62.55 317.00 81.26 58.81 425.71 256.65 370.72 238.05 133.61 64.20 107.45 188.67 122.85 81.21 44 E3_Dc KnownBoundary 0 17.86 6.71 3.13 2.06 0.00 0.00 0.00 1.93 6.42 5.45 9.27 5.40 6.49 49.44 23.98 33.24 13.09 1.95 0.00 3.26 8.03 6.25 4.35 45 E3c_E3e KnownJunction 0 107.06 24.73 74.21 37.06 47.28 77.29 41.60 80.59 46.15 51.71 314.45 163.10 120.61 427.57 226.96 425.79 257.22 149.07 58.73 98.24 137.83 176.90 96.03 46 E3c_E3f KnownJunction 0 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 11.95 4.45 7.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER3f ExonRegion 0 115.46 34.16 73.03 36.25 40.40 59.51 40.78 74.50 48.29 59.81 341.74 121.66 98.73 467.91 272.14 413.42 277.94 147.82 64.98 104.79 161.86 162.62 86.78 48 ER3g ExonRegion 0 20.67 4.47 3.57 3.94 6.61 4.03 3.10 9.41 5.26 4.98 25.96 7.65 3.99 60.91 16.73 67.28 33.91 8.22 4.77 7.61 6.61 10.82 5.25 49 E3_Ae KnownBoundary 0 45.86 9.14 5.09 2.03 7.39 10.22 6.14 11.01 4.20 6.15 17.11 0.00 0.00 51.50 8.90 55.11 27.12 9.08 19.29 8.69 2.53 15.12 3.93 50 ER3h ExonRegion 0 102.25 28.58 87.02 44.12 57.96 60.54 60.57 109.99 70.00 60.04 396.56 143.81 131.69 587.18 318.88 587.82 345.27 149.84 99.35 102.55 201.82 210.86 124.56 51 E3_Dd KnownBoundary 0 20.74 0.00 14.16 4.13 0.00 5.56 14.22 20.25 13.74 9.32 63.81 5.70 12.82 52.62 48.46 92.71 51.33 4.19 9.22 23.65 19.52 2.76 8.71 52 E3d_E3f KnownJunction 1 55.12 33.68 93.67 40.12 82.77 48.27 65.18 95.87 51.45 51.90 361.41 140.60 79.38 410.21 254.65 400.07 271.90 122.49 65.04 88.08 181.13 214.19 72.73 53 E3_De KnownBoundary 0 18.60 3.29 3.58 2.06 4.07 2.90 6.76 2.22 5.38 0.00 16.00 7.65 0.00 10.95 6.30 69.64 28.33 7.25 4.80 0.00 6.30 6.25 4.35 54 E3_Df KnownBoundary 0 28.30 2.76 18.51 7.76 4.33 8.69 3.89 36.19 9.37 10.56 31.22 0.00 34.58 75.81 42.28 143.04 61.90 14.09 4.80 9.33 14.64 22.41 29.36 55 E3f_E3f KnownJunction 0 0.00 0.00 1.83 0.00 0.00 3.12 4.15 2.34 1.50 1.24 5.00 0.00 0.00 2.47 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 56 ER3i ExonRegion 1 31.94 2.03 24.84 9.29 3.65 11.84 11.31 37.08 18.08 14.18 69.41 10.63 16.63 101.14 71.74 171.57 79.52 19.65 13.61 22.24 24.04 15.15 27.23 57 ER3j ExonRegion 1 31.75 4.07 26.96 9.54 2.68 12.70 10.90 39.89 20.33 15.09 66.91 4.33 24.53 106.57 67.62 193.65 74.65 20.89 11.03 15.22 21.36 19.55 31.63 58 ER3k ExonRegion 0 43.79 6.43 17.12 12.22 15.88 24.83 11.18 41.11 13.35 11.57 64.42 22.91 46.39 138.19 81.06 201.87 79.12 20.84 16.74 18.52 22.20 18.13 31.09 59 E3_Af KnownBoundary 0 61.12 9.08 10.91 17.28 22.58 34.41 19.65 40.50 11.98 20.68 46.70 22.96 26.13 165.93 77.26 185.59 92.85 20.19 0.00 41.16 17.30 28.78 30.73 60 ER3l ExonRegion 0 114.87 41.57 108.67 54.20 97.24 77.48 95.34 149.88 83.43 88.75 541.38 188.12 170.59 716.27 426.61 851.63 463.21 179.15 142.26 96.94 233.33 310.44 183.30 61 E3g_E4a KnownJunction 0 151.36 47.69 131.37 65.26 81.15 86.09 137.08 142.57 85.76 86.76 553.03 312.55 169.47 820.42 465.05 1026.06 330.71 211.79 208.95 63.73 241.73 301.09 175.17 62 ER4a ExonRegion 0 149.34 40.84 119.79 57.03 84.09 95.38 128.65 146.84 81.81 91.68 554.74 228.75 261.59 792.49 447.53 860.05 420.57 222.47 160.93 96.46 254.12 280.39 205.94 63 E4_Da KnownBoundary 0 143.66 50.65 108.13 40.19 93.21 107.21 151.17 144.17 74.51 93.48 452.33 207.97 314.27 755.32 519.81 821.66 347.17 154.04 151.25 94.53 235.50 260.18 160.82 64 ER4b ExonRegion 0 134.29 53.37 105.33 53.68 79.56 81.96 106.97 156.65 70.23 82.16 480.38 236.80 271.45 785.05 452.54 788.16 345.99 174.03 149.26 100.87 238.18 274.68 180.33 65 E4_Db KnownBoundary 0 180.85 65.32 117.71 61.16 93.29 104.14 142.38 151.23 68.87 75.97 535.29 255.68 225.96 941.97 618.33 887.37 424.96 162.91 171.68 112.49 254.46 314.80 205.73 66 ER4c ExonRegion 0 157.98 56.61 136.03 57.70 96.72 75.93 122.79 143.04 88.25 89.94 490.54 208.71 211.26 803.38 478.49 660.14 392.30 178.57 144.09 113.06 206.29 238.99 193.60 67 E4_Dc KnownBoundary 0 167.07 63.48 124.39 74.15 148.13 75.35 143.75 165.36 100.90 102.88 463.80 306.10 242.68 711.11 461.71 542.25 397.29 131.86 142.22 146.05 209.80 227.79 147.34 68 ER4d ExonRegion 0 180.10 39.07 112.85 68.41 102.09 113.54 139.63 155.80 84.72 95.45 488.18 180.22 229.13 772.16 505.55 633.34 422.29 150.73 107.96 115.84 206.54 245.40 179.88 69 E4_Dd KnownBoundary 0 208.19 38.61 77.50 47.48 116.64 104.49 122.55 132.01 65.07 72.74 397.00 121.54 161.35 639.53 396.81 558.57 407.29 93.93 87.72 64.43 161.30 268.94 157.92 70 E4_De KnownBoundary 0 168.33 61.70 68.54 64.66 65.45 85.01 122.68 114.80 64.00 84.96 521.82 286.14 324.00 613.81 407.20 455.52 453.11 86.35 145.51 67.50 232.41 184.37 114.81 71 ER4e ExonRegion 0 193.85 54.19 96.30 74.24 109.55 124.70 136.84 164.61 91.76 112.13 633.19 277.09 311.47 852.85 508.74 627.82 543.29 125.86 145.40 89.24 262.63 292.92 178.62 72 ER4f ExonRegion 0 385.19 77.45 170.02 82.91 206.00 114.46 154.04 186.69 86.66 87.43 488.08 281.59 411.38 723.69 599.78 703.73 404.45 132.02 140.20 108.00 189.53 277.18 193.66 73 ER4g ExonRegion 0 6.35 2.03 1.63 0.00 1.78 3.67 2.65 0.00 0.00 1.15 0.00 0.00 3.13 4.87 11.61 0.99 2.20 1.23 2.12 1.42 0.00 0.69 0.98