Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRRT3 Gene 0 6.85 12.33 24.42 13.95 7.57 12.57 9.18 19.79 13.78 17.17 37.81 8.18 23.52 22.10 25.08 24.31 76.07 32.01 18.02 26.50 29.49 9.85 15.12 2 412055 Transcript 0 5.87 9.93 12.07 9.64 6.52 7.73 8.73 13.94 10.18 8.99 17.22 7.58 14.34 15.87 22.55 23.88 40.92 10.21 22.75 11.95 14.90 9.26 12.60 3 411976 Transcript 0 10.23 21.04 18.00 18.83 0.92 8.86 10.53 7.92 3.63 6.77 2.53 15.93 3.32 1.55 1.42 5.88 3.67 25.09 15.50 27.81 6.09 2.26 11.78 4 443955 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 449507 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 295984 Transcript 0 0.00 0.00 1.45 1.23 0.00 0.00 0.00 4.52 2.66 0.00 2.68 0.00 7.79 2.24 8.90 0.00 4.21 1.62 0.00 2.49 3.15 0.00 0.00 7 ER1a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 1.47 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.28 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 6.41 0.09 1.36 1.44 1.83 2.24 0.00 0.00 0.26 3.57 0.00 0.00 0.87 2.90 0.23 2.03 1.42 0.00 11.29 1.36 0.00 4.52 9 ER1c ExonRegion 0 0.00 8.13 1.23 1.36 2.68 3.67 6.62 0.00 0.00 1.15 5.80 0.00 0.00 2.17 8.70 2.97 6.60 1.85 0.00 14.89 8.81 0.00 8.81 10 ER1d ExonRegion 0 4.97 11.54 3.65 2.80 8.28 15.90 10.11 1.23 1.85 6.51 28.81 0.00 3.79 10.31 8.26 16.80 44.69 4.73 9.80 14.98 20.47 0.68 13.05 11 E1_Da NovelBoundary 0 0.00 6.12 31.64 8.26 0.00 9.71 0.00 6.41 4.86 1.26 8.05 0.00 0.00 2.12 18.54 19.57 4.77 51.86 4.42 11.31 11.98 2.63 0.00 12 E1a_E2a KnownJunction 0 9.19 0.00 6.50 3.90 20.03 13.06 10.78 4.48 5.87 14.75 13.90 0.00 0.00 4.94 8.90 18.63 47.87 8.95 23.06 6.33 11.92 2.94 11.01 13 Ix Intron 0 6.06 18.51 26.99 22.30 3.64 7.49 5.28 5.68 3.45 4.89 2.27 4.22 2.98 2.79 2.62 7.95 9.14 28.49 11.96 32.84 9.71 3.91 15.57 14 Ix_SR1 SilentIntronRegion 0 6.07 18.56 27.06 22.36 3.65 7.51 5.29 5.69 3.46 4.91 2.27 4.23 2.99 2.79 2.63 7.97 9.16 28.57 11.99 32.93 9.74 3.92 15.61 15 E2_Aa NovelBoundary 0 0.00 18.29 28.47 15.98 7.89 13.80 10.20 4.11 5.53 5.02 0.00 0.00 0.00 4.83 0.00 18.37 8.70 36.60 16.94 37.46 14.76 8.08 8.54 16 ER2a ExonRegion 0 9.09 17.01 37.31 23.23 8.93 19.23 13.22 24.28 16.90 26.58 44.56 3.92 17.80 18.95 29.58 34.20 91.16 40.74 28.26 42.24 32.06 10.30 28.50 17 E2_Da KnownBoundary 0 0.00 8.88 28.44 19.81 0.00 2.67 11.17 17.74 18.29 18.19 35.43 11.40 19.97 9.48 10.75 18.11 61.90 25.45 29.08 33.81 25.39 2.94 19.29 18 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2_Db KnownBoundary 1 0.00 5.59 19.48 9.79 0.00 20.67 4.06 23.86 4.92 8.11 48.59 0.00 12.82 9.48 11.50 13.42 112.39 24.75 11.86 29.85 12.17 8.08 19.55 20 E2b_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER2b ExonRegion 0 6.35 13.56 53.51 25.89 2.68 24.45 20.30 39.75 22.23 27.14 90.20 12.99 34.39 33.02 66.73 41.61 198.05 52.97 42.47 76.60 56.56 14.58 33.28 22 ER2c ExonRegion 0 8.34 18.40 50.81 29.15 11.59 18.91 12.82 32.79 23.37 28.52 78.28 18.46 58.44 41.85 42.72 46.27 164.42 75.85 32.53 53.95 51.67 17.37 28.52 23 E2_Dc NovelBoundary 0 0.00 0.00 17.62 20.94 0.00 2.90 0.00 13.43 3.41 6.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.33 0.00 43.98 20.57 0.00 12.46 24 E2c_E3a KnownJunction 0 18.08 28.61 16.35 8.39 8.15 11.41 26.98 46.87 15.80 34.81 65.07 11.40 59.41 42.79 95.68 49.65 130.53 33.87 29.93 6.46 52.33 15.19 28.43 25 Ix Intron 0 2.31 12.76 17.93 16.62 2.19 2.50 5.42 4.92 4.52 3.73 3.69 1.18 0.00 1.54 1.91 6.48 0.90 31.56 6.08 30.17 9.60 1.14 4.81 26 Ix_SR1 SilentIntronRegion 0 2.33 12.88 18.12 16.80 2.21 2.53 5.47 4.97 4.57 3.77 3.73 1.19 0.00 1.55 1.93 6.55 0.91 31.90 6.15 30.50 9.71 1.15 4.86 27 E3_Aa NovelBoundary 0 3.78 17.63 32.58 27.67 0.00 4.26 7.51 14.25 7.38 2.95 6.53 6.30 6.82 2.41 4.57 3.67 0.00 30.84 33.88 48.26 11.55 5.82 4.27 28 ER3a ExonRegion 0 5.28 14.52 26.32 18.58 6.54 15.55 10.95 30.60 17.47 25.67 66.71 14.15 47.74 32.99 38.11 37.40 134.64 60.85 22.62 39.25 50.47 14.37 20.58 29 E3_Da KnownBoundary 0 2.82 8.62 9.28 15.38 3.74 5.62 8.48 5.63 4.92 7.47 2.68 0.00 0.00 7.30 0.00 3.85 0.00 28.06 3.95 32.02 13.47 2.39 12.12 30 E3a_E4a KnownJunction 0 0.00 12.04 22.06 8.76 0.00 5.79 2.25 25.51 15.65 36.96 37.54 18.01 53.89 21.90 18.17 40.16 120.71 32.42 20.42 8.37 59.99 10.72 10.59 31 ER3b ExonRegion 0 10.23 21.04 18.00 18.83 0.92 8.86 10.53 7.92 3.63 6.77 2.53 15.93 3.32 1.55 1.42 5.88 3.67 25.09 15.50 27.81 6.09 2.26 11.78 32 E3_Db NovelBoundary 0 3.78 23.88 48.17 37.19 3.99 0.00 13.91 6.57 2.60 10.77 0.00 12.60 0.00 4.94 0.00 4.19 4.58 18.90 8.28 20.71 8.15 6.06 4.35 33 E4_Aa NovelBoundary 0 14.00 3.35 3.49 11.75 0.00 2.61 3.89 1.60 0.00 4.54 2.47 0.00 0.00 0.00 0.00 8.72 0.00 3.94 4.33 5.11 0.00 3.12 3.93 34 ER4a ExonRegion 0 3.60 7.26 20.17 9.64 3.18 9.90 5.21 15.08 11.60 15.29 35.72 4.42 16.93 22.28 23.54 18.50 64.57 24.39 12.87 19.27 30.02 7.80 9.20 35 E4_Da KnownBoundary 0 67.79 107.74 167.06 139.64 152.38 97.22 105.99 141.71 135.68 116.02 108.29 24.01 29.71 10.24 40.42 96.73 127.72 192.80 72.38 92.62 71.66 24.62 84.85 36 E4a_E4d KnownJunction 0 0.00 0.00 1.45 1.23 0.00 0.00 0.00 4.52 2.66 0.00 2.68 0.00 7.79 2.24 8.90 0.00 4.21 1.62 0.00 2.49 3.15 0.00 0.00 37 ER4b ExonRegion 0 11.74 19.86 24.14 17.91 13.03 13.99 17.45 27.88 20.37 17.98 33.28 15.15 28.67 31.73 45.10 47.76 81.84 20.42 45.49 22.61 29.79 18.52 25.21 38 E4_Ab KnownBoundary 1 148.99 203.12 347.00 348.54 145.93 100.17 185.40 388.03 408.13 305.23 72.86 53.12 75.32 49.21 49.57 250.53 98.46 447.70 149.84 201.59 143.69 164.66 206.49 39 E4_Ac KnownBoundary 0 185.00 252.72 200.94 238.76 124.70 92.84 186.19 251.25 193.75 190.72 114.50 137.14 39.77 129.14 90.12 199.26 162.13 264.51 178.08 209.26 118.92 81.44 173.03 40 ER4c ExonRegion 1 55.03 75.92 22.06 26.35 34.78 26.28 67.08 20.74 24.29 20.64 35.44 64.94 81.29 81.21 72.53 75.29 85.82 64.67 58.40 76.60 40.40 46.53 64.61 41 ER4d ExonRegion 1 26.66 23.78 10.83 8.87 13.82 12.98 21.95 20.14 12.39 9.91 22.75 18.14 36.60 25.19 28.26 30.62 69.06 16.53 22.26 17.25 19.53 20.22 27.59 42 E4_Ad KnownBoundary 0 2.89 6.05 5.53 3.56 19.69 22.20 15.19 12.36 8.51 14.08 27.80 0.00 13.64 10.42 4.45 8.63 59.84 12.89 14.02 5.43 29.90 17.21 3.67 43 ER4e ExonRegion 0 11.65 12.32 15.89 10.14 28.36 14.28 15.49 33.18 22.97 19.46 27.05 9.53 20.70 11.88 19.43 19.63 59.10 19.87 9.86 21.14 24.61 13.83 15.36 44 E4_Db KnownBoundary 0 3.78 9.21 27.26 10.49 12.82 2.73 4.02 39.84 28.39 21.60 14.16 5.85 0.00 5.18 13.35 11.54 45.82 17.29 3.95 14.89 20.51 0.00 7.34 45 ER4f ExonRegion 0 5.03 9.51 8.45 3.41 8.90 8.60 5.76 12.67 6.21 7.05 4.26 1.54 2.76 2.42 4.74 4.81 11.50 7.30 2.79 9.66 5.86 1.87 2.32