Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CMTM7	Gene	0	72.93	1.27	16.12	7.16	29.05	5.62	8.02	13.79	9.48	4.89	33.30	8.67	95.09	14.39	34.72	1.33	8.64	1.83	20.81	1.44	63.43	55.70	47.05
2	334983	Transcript	0	7.15	0.50	2.58	0.71	6.17	0.07	1.55	2.30	1.70	1.63	1.69	0.97	8.80	0.23	2.27	0.03	1.52	0.44	2.84	0.16	4.36	3.33	6.09
3	396546	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	349718	Transcript	0	6.22	0.00	23.12	1.73	3.90	2.90	0.00	0.00	1.48	2.42	10.32	6.30	13.64	4.83	0.00	0.00	4.77	0.00	7.91	0.00	7.91	4.78	3.59
5	454304	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	465248	Transcript	0	3.63	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.08	0.00	4.35
7	487007	Transcript	0	2.05	0.00	0.14	0.00	2.43	0.14	0.21	0.20	1.26	0.00	0.00	0.00	0.00	0.21	0.16	0.00	0.51	0.00	0.25	0.00	1.03	0.80	0.23
8	464689	Transcript	0	64.80	0.54	4.37	5.62	13.43	2.84	3.74	5.04	5.67	4.01	5.65	1.77	19.01	4.13	4.24	0.21	2.56	0.17	2.73	0.89	17.84	17.83	22.61
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.35	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	5.19	0.00	0.00
10	ER1b	ExonRegion	0	6.13	0.01	0.43	0.00	2.82	1.02	1.42	0.54	0.14	0.00	2.83	0.00	0.00	2.08	3.34	0.28	0.00	0.00	0.18	0.00	7.08	2.15	2.17
11	E1_Ac	KnownBoundary	0	70.98	2.89	4.55	0.00	29.12	27.26	16.74	4.81	3.10	0.00	12.74	0.00	0.00	4.24	32.14	4.10	0.00	0.00	3.67	0.00	17.24	22.66	24.50
12	ER1c	ExonRegion	0	55.20	1.40	7.48	0.14	13.49	10.55	9.95	5.13	2.69	0.88	23.04	0.32	12.29	12.61	31.47	0.65	6.73	0.43	5.86	0.72	49.26	34.43	34.87
13	E1a_E2a	KnownJunction	0	36.30	3.35	29.12	8.72	12.14	0.00	4.46	19.47	10.07	10.34	86.02	6.30	79.22	38.20	56.12	7.95	3.93	4.02	7.53	6.33	159.51	89.46	77.85
14	ER1d	ExonRegion	0	22.55	2.03	17.58	5.61	4.53	0.00	2.39	14.56	7.93	8.29	77.99	6.66	46.00	26.92	37.83	4.23	0.00	1.85	6.98	3.68	135.36	78.13	63.14
15	ER2a	ExonRegion	0	120.22	1.50	39.00	13.47	45.20	13.12	12.27	18.10	14.33	11.05	105.18	16.52	131.05	40.12	94.54	3.09	18.88	1.73	33.01	4.95	142.70	122.10	90.29
16	E2a_E3a	KnownJunction	0	171.66	0.00	50.97	10.82	72.33	32.03	43.37	24.15	15.13	13.24	146.41	13.95	244.79	26.61	58.35	3.85	12.90	0.00	33.32	2.62	154.32	176.11	146.14
17	E2a_E4c	KnownJunction	0	6.22	0.00	23.12	1.73	3.90	2.90	0.00	0.00	1.48	2.42	10.32	6.30	13.64	4.83	0.00	0.00	4.77	0.00	7.91	0.00	7.91	4.78	3.59
18	E2a_E5a	KnownJunction	0	3.63	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.08	0.00	4.35
19	I2_SR2	SilentIntronRegion	0	8.92	0.25	0.90	2.50	2.97	1.06	2.61	1.88	2.00	1.29	2.08	0.96	22.33	1.77	2.26	0.73	0.00	0.78	2.37	0.26	12.74	7.61	12.60
20	I2_AR2	ActiveIntronRegion	0	11.90	0.43	1.15	1.28	1.12	1.65	3.33	4.91	3.16	1.39	1.33	2.00	24.90	0.28	1.66	0.00	0.00	1.37	2.65	0.00	11.11	4.52	9.34
21	ER3a	ExonRegion	0	212.74	3.41	35.02	12.79	36.04	10.09	21.53	27.88	21.34	11.51	109.12	21.09	323.01	44.87	91.72	4.22	25.50	1.73	33.81	0.34	181.49	153.44	121.02
22	E3_Ab	KnownBoundary	0	328.87	6.12	35.84	22.24	15.96	14.08	10.86	18.85	27.52	17.89	116.98	31.06	280.18	35.02	98.40	0.00	32.35	0.00	43.86	0.00	201.02	160.13	79.64
23	ER3b	ExonRegion	0	350.14	2.58	34.01	11.93	26.83	9.42	6.80	33.21	18.99	11.00	112.74	23.17	242.36	42.71	116.91	0.00	27.83	1.85	39.09	0.63	192.44	149.00	93.73
24	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E3a_E4c	KnownJunction	0	522.69	0.00	41.31	9.46	29.29	12.55	5.96	47.07	18.49	10.80	118.29	24.91	304.36	36.20	147.10	0.00	25.25	2.57	39.15	2.68	161.79	147.45	123.78
26	I3	Intron	0	28.71	0.49	2.36	2.44	11.67	1.58	5.33	5.06	2.91	1.15	4.63	3.03	31.54	4.03	3.35	0.71	1.90	0.39	2.60	0.61	9.51	13.18	16.89
27	I3_AR1	ActiveIntronRegion	0	22.49	0.25	0.46	2.29	9.37	1.15	5.13	2.89	3.69	0.64	4.11	2.67	38.22	3.89	2.69	0.37	2.06	0.34	3.98	0.00	8.00	12.49	18.35
28	I3_SR1	SilentIntronRegion	0	34.03	0.89	0.00	4.78	21.22	0.91	5.99	6.22	2.80	1.49	3.37	4.74	45.94	2.68	3.47	2.21	1.44	0.00	0.00	0.67	7.10	14.39	10.47
29	I3_AR2	ActiveIntronRegion	0	33.43	0.80	4.42	2.03	12.90	2.30	5.34	7.15	1.90	1.67	6.52	4.06	24.95	5.73	4.31	0.90	2.17	0.72	2.51	0.64	12.57	16.44	19.18
30	I3_SR2	SilentIntronRegion	0	29.67	0.00	4.13	2.06	7.45	1.45	5.42	4.73	3.55	0.92	2.22	0.00	19.45	1.13	2.63	0.00	1.13	0.00	1.09	2.18	7.69	5.79	12.20
31	E4_Aa	NovelBoundary	0	16.82	5.85	6.45	0.00	12.14	2.78	6.40	11.46	4.54	1.40	4.74	18.91	46.75	2.47	0.00	0.00	0.00	0.00	8.66	3.13	5.81	17.15	12.55
32	ER4a	ExonRegion	0	30.20	1.05	0.88	3.37	12.42	3.03	4.83	6.58	4.63	2.02	4.29	3.10	20.20	2.92	4.44	0.43	2.43	0.31	4.07	0.37	13.51	13.16	14.39
33	E4_Ab	KnownBoundary	0	76.61	2.96	0.00	2.00	24.53	2.90	9.01	20.25	4.40	2.85	12.95	6.30	25.81	10.89	9.39	0.00	4.30	0.00	14.12	3.13	12.05	28.35	25.44
34	ER4b	ExonRegion	0	32.25	1.37	4.08	2.55	12.89	1.81	3.57	6.51	3.45	2.25	1.93	1.09	18.87	4.90	10.90	0.00	4.55	0.57	5.49	0.95	17.54	14.25	16.77
35	E4_Da	KnownBoundary	0	87.42	0.00	7.10	8.72	33.11	2.38	5.74	4.23	8.10	9.29	2.11	0.00	13.64	10.01	15.20	3.42	0.00	0.00	0.00	2.56	28.48	21.98	49.34
36	ER4c	ExonRegion	0	99.40	0.03	7.86	7.87	14.45	2.66	2.65	3.50	6.70	6.01	7.01	0.43	17.82	5.34	4.03	0.00	2.68	0.02	1.39	1.41	22.17	22.50	30.83
37	E4_Ac	KnownBoundary	0	123.58	0.00	4.08	6.06	15.62	2.33	0.00	2.38	3.10	4.89	4.84	0.00	19.80	2.47	0.00	0.00	8.79	0.00	4.42	2.62	26.07	14.82	20.23
38	ER4d	ExonRegion	0	280.71	4.59	82.19	21.03	57.18	15.96	22.74	41.21	35.97	27.04	108.31	26.56	251.06	41.65	126.87	1.06	25.47	0.71	49.86	6.09	206.03	161.33	109.71
39	E4b_E5a	KnownJunction	0	358.06	8.22	80.93	22.11	113.50	41.06	60.72	53.31	50.66	18.10	120.82	13.50	332.77	54.39	148.84	4.36	57.69	0.00	121.89	5.82	238.46	190.74	188.57
40	I4_AR1	ActiveIntronRegion	0	20.58	0.88	0.79	2.19	4.63	0.79	2.57	0.56	1.19	1.48	0.84	0.00	0.83	0.00	2.21	0.00	0.71	0.60	0.69	0.00	7.13	2.70	5.08
41	E5_Aa	NovelBoundary	0	34.90	0.00	1.83	2.00	12.22	0.00	6.71	4.11	0.00	0.00	0.00	0.00	6.66	0.00	0.00	0.00	0.00	0.00	8.75	0.00	11.24	0.00	3.41
42	ER5a	ExonRegion	0	187.17	3.36	79.05	28.28	119.75	23.88	28.27	59.15	39.41	16.57	145.17	36.84	396.35	62.14	154.83	6.34	36.91	9.94	98.18	6.07	273.38	246.72	192.52
43	E5_Da	KnownBoundary	0	358.66	3.35	109.72	43.48	239.39	23.45	50.35	84.65	29.43	21.54	156.25	31.21	378.06	44.74	163.30	7.86	26.74	19.98	82.64	3.26	219.37	249.16	160.14
44	E5a_E7a	KnownJunction	0	3.19	0.00	0.00	0.00	3.90	0.00	0.00	0.00	1.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER5b	ExonRegion	0	283.68	2.14	48.75	26.14	107.46	11.55	23.11	45.16	28.14	12.19	106.27	32.56	428.33	42.42	106.84	4.79	23.34	8.39	90.01	4.08	202.42	196.01	168.61
46	E5_Db	KnownBoundary	1	818.29	15.98	22.41	28.83	308.83	38.56	44.07	19.72	15.57	10.45	114.34	66.17	906.92	81.17	100.62	16.06	49.74	9.99	131.39	2.75	314.45	173.23	324.81
47	E5_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	3.12	0.00
48	E5_Dd	KnownBoundary	0	0.00	0.00	5.09	0.00	0.00	0.00	2.12	2.34	0.00	1.16	2.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER5c	ExonRegion	1	390.40	10.17	17.93	23.17	178.30	23.84	26.72	14.14	11.23	7.51	76.26	47.62	669.82	52.71	115.00	8.92	36.61	9.24	86.00	0.39	230.59	107.02	196.22
50	ER5d	ExonRegion	1	374.20	10.17	13.97	21.26	171.25	22.01	25.16	11.41	9.63	5.96	70.74	47.62	635.03	49.05	101.54	8.92	39.61	7.39	85.37	0.00	202.74	95.84	177.37
51	ER5e	ExonRegion	0	7.15	0.50	2.58	0.71	6.17	0.07	1.55	2.30	1.70	1.63	1.69	0.97	8.80	0.23	2.27	0.03	1.52	0.44	2.84	0.16	4.36	3.33	6.09
52	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	I6	Intron	0	20.39	1.67	4.20	3.20	9.49	1.43	4.51	3.45	1.99	1.33	0.90	0.79	9.53	0.94	2.28	0.98	0.71	1.23	4.96	0.63	4.84	3.33	6.68
54	I6_SR1	SilentIntronRegion	0	24.13	1.85	5.50	3.45	10.00	1.79	4.59	3.81	2.30	1.50	0.84	0.70	10.73	1.20	2.50	0.92	0.65	1.73	6.34	0.72	6.02	3.50	8.26
55	I6_AR1	ActiveIntronRegion	0	16.74	2.70	1.88	2.94	5.28	0.88	2.90	3.19	1.90	1.35	0.85	2.85	2.28	0.93	4.47	0.00	0.00	1.22	5.16	0.94	4.87	1.62	9.28
56	I6_SR2	SilentIntronRegion	0	22.76	4.22	4.01	3.67	11.96	0.98	6.51	4.56	1.16	0.77	3.36	1.43	9.86	1.38	1.87	4.76	0.44	0.86	3.42	0.28	9.97	5.30	8.68
57	I6_AR2	ActiveIntronRegion	0	25.25	0.33	2.36	2.61	18.45	0.62	4.48	3.68	0.68	1.64	0.43	0.80	8.82	0.30	1.74	0.33	0.74	0.52	2.49	0.24	2.00	3.96	3.90
58	E7_Aa	NovelBoundary	0	270.12	41.77	25.49	22.34	209.59	104.71	154.30	29.78	16.15	30.86	187.99	157.55	100.16	301.08	167.01	184.14	119.31	45.89	81.32	39.31	117.62	263.98	200.52
59	ER7a	ExonRegion	0	0.92	0.00	0.29	0.00	0.95	0.28	0.41	0.40	0.73	0.00	0.00	0.00	0.00	0.42	0.32	0.00	1.03	0.00	0.49	0.00	2.06	1.59	0.46