Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPL32 Gene 0 1030.74 1942.06 2487.01 1911.10 836.65 1070.41 622.95 600.59 201.01 484.35 1557.01 604.89 325.27 818.59 1700.31 1168.90 1206.14 665.16 1642.47 545.34 1221.78 715.84 662.39 2 429711 Transcript 0 3.73 9.62 11.05 5.13 5.04 5.67 6.57 4.38 3.05 4.87 1.41 2.57 1.01 1.97 1.30 1.40 1.61 6.37 7.02 6.29 2.17 1.38 3.22 3 396957 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 273223 Transcript 0 15.57 39.25 120.44 71.14 38.56 16.67 18.62 34.29 11.18 26.54 111.86 46.92 27.07 37.84 65.23 41.34 84.14 25.75 46.27 25.98 96.18 24.91 24.13 5 435983 Transcript 1 178.62 186.61 25.84 46.95 47.11 148.78 51.58 11.67 7.78 7.79 0.00 0.00 0.00 14.30 26.70 32.21 0.00 19.98 49.22 2.94 35.46 21.98 31.76 6 457131 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 452606 Transcript 0 26.46 26.03 11.80 7.69 15.40 17.55 20.90 5.43 3.78 7.18 23.76 13.15 6.99 24.93 18.71 28.62 20.93 12.22 18.23 9.99 14.09 13.70 9.53 8 396953 Transcript 0 37.77 11.70 28.25 11.78 8.93 9.27 10.21 15.61 9.33 11.64 46.08 9.45 8.89 40.22 38.48 37.12 36.10 23.62 20.93 11.36 25.81 14.11 18.26 9 434963 Transcript 0 2.74 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 1.26 5.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1a ExonRegion 0 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 24.22 36.27 6.09 4.54 6.32 19.05 9.78 2.54 0.65 2.10 9.61 1.92 0.13 15.38 38.68 40.29 25.67 2.00 6.64 4.67 18.06 2.43 3.18 12 E1_Ac KnownBoundary 0 0.00 3.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Af KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 2.32 0.00 0.00 0.00 0.00 0.00 16 E1_Ag KnownBoundary 1 350.28 647.38 201.44 96.52 105.35 260.59 212.86 40.95 23.64 40.13 88.44 159.50 181.81 189.48 411.15 321.11 209.35 34.57 156.33 115.24 295.11 75.93 89.29 17 ER1c ExonRegion 0 97.36 176.92 29.41 35.44 29.43 78.85 59.58 13.83 7.41 12.62 36.73 4.33 4.69 68.21 168.27 133.75 85.82 3.70 47.78 27.66 92.56 16.67 20.56 18 ER1d ExonRegion 0 105.83 207.43 40.44 42.25 40.14 95.36 64.87 15.56 8.65 13.76 38.66 4.33 4.69 82.83 205.99 142.66 92.43 5.54 63.71 31.91 114.59 31.25 23.49 19 ER1e ExonRegion 0 107.94 217.59 44.11 44.98 40.14 95.36 66.20 15.56 8.65 14.91 38.66 4.33 4.69 82.83 220.50 142.66 92.43 7.39 66.89 34.04 121.20 31.25 29.37 20 ER1f ExonRegion 0 554.38 803.26 221.09 189.15 151.37 386.67 249.28 49.26 16.85 58.90 130.33 17.94 42.88 251.85 572.58 272.59 221.16 25.74 159.04 121.43 268.70 113.40 119.56 21 ER1g ExonRegion 1 20510.26 36065.93 9122.85 8054.42 14055.24 19809.27 10848.20 2608.78 849.51 2201.83 7417.03 100.69 178.22 7796.79 20980.87 10470.97 8368.43 3419.02 12075.35 4864.85 6554.40 6099.89 6834.32 22 E1_Da KnownBoundary 0 73.72 13.22 9.40 4.13 17.83 15.67 25.35 8.79 6.86 7.23 52.91 0.00 0.00 33.32 38.45 80.41 54.14 43.07 25.79 3.26 34.90 11.70 20.40 23 E1a_E1i KnownJunction 0 178.62 186.61 25.84 46.95 47.11 148.78 51.58 11.67 7.78 7.79 0.00 0.00 0.00 14.30 26.70 32.21 0.00 19.98 49.22 2.94 35.46 21.98 31.76 24 E1a_E1j KnownJunction 0 558.54 448.74 50.18 122.99 167.57 223.00 110.41 21.52 21.44 21.65 54.80 0.00 6.33 41.50 86.53 74.68 75.08 23.13 144.57 20.01 68.33 92.46 176.62 25 E1a_E1k KnownJunction 0 25.41 32.03 3.55 0.00 8.83 13.97 8.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.43 8.89 4.86 4.60 13.93 0.00 9.08 6.18 0.00 26 E1a_E1l KnownJunction 1 54823.27 93962.08 18463.39 16932.68 42686.36 51419.20 29336.27 5378.11 1708.49 4257.49 18214.35 405.58 509.87 15065.65 40691.25 25741.62 19306.38 8433.73 32094.29 10946.39 15388.62 13448.04 16631.38 27 E1a_E2b NovelJunction 0 3.56 13.29 34.27 18.35 32.09 35.55 36.52 4.31 1.62 9.21 10.74 0.00 0.00 7.36 30.04 8.63 4.77 2.49 17.79 29.08 2.97 3.12 0.00 28 ER1h ExonRegion 0 14.37 5.68 16.46 7.89 4.42 3.31 7.71 8.06 6.30 5.39 31.42 4.90 5.89 29.68 23.12 31.16 23.94 14.36 15.68 6.90 20.39 11.57 11.86 29 E1_Ah KnownBoundary 0 52.75 5.92 48.28 22.97 15.28 2.56 14.93 29.74 13.69 14.48 51.64 0.00 13.47 42.67 43.14 22.30 19.92 34.61 17.04 5.62 19.65 14.57 8.45 30 ER1i ExonRegion 0 39.16 11.83 35.19 15.72 12.08 10.30 10.92 20.12 8.30 5.09 54.52 14.79 8.51 45.88 34.84 35.14 37.98 25.55 13.99 10.16 22.17 19.44 18.12 31 E1_Db KnownBoundary 0 135.73 11.84 27.85 17.51 24.96 7.44 15.02 20.45 6.48 4.70 42.22 0.00 21.91 49.62 23.98 43.32 35.16 15.05 8.94 20.26 22.49 19.41 28.77 32 E1b_E1l KnownJunction 0 2.74 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 1.26 5.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 0.00 0.00 0.00 0.00 0.00 33 ER1j ExonRegion 0 61.18 17.73 40.05 15.67 13.45 15.24 12.70 23.16 12.36 17.90 60.74 14.00 11.89 50.75 53.84 43.09 48.26 32.89 26.18 15.82 31.22 16.65 24.66 34 E1_Ai KnownBoundary 0 39.86 20.85 48.37 42.15 19.35 11.81 26.06 19.92 17.45 9.75 38.90 18.16 27.11 31.02 26.58 27.26 50.86 42.45 53.37 14.57 34.04 30.62 20.49 35 E1_Aj KnownBoundary 0 95.87 70.38 49.58 48.81 25.64 43.78 15.02 29.49 13.34 20.82 27.11 0.00 6.33 25.02 17.80 42.81 17.77 29.39 28.33 22.95 20.94 28.72 24.33 36 ER1k ExonRegion 0 165.62 147.10 67.60 53.15 38.13 117.52 43.03 32.98 20.69 25.61 54.28 6.13 26.58 61.04 69.63 61.18 51.44 40.03 82.02 24.29 56.93 41.84 51.15 37 ER1l ExonRegion 0 169.06 137.35 93.93 96.70 41.99 74.76 47.18 54.57 27.31 37.37 91.85 4.33 14.17 62.15 73.30 60.59 58.24 48.83 48.66 31.00 62.87 43.61 58.16 38 E1_Ak KnownBoundary 0 50.16 13.75 54.20 21.74 4.16 5.00 7.86 28.05 10.07 10.69 16.48 0.00 0.00 9.18 11.99 3.67 13.00 17.87 8.75 5.05 18.66 10.59 15.28 39 E1_Al KnownBoundary 0 46.53 36.18 44.11 28.63 33.70 8.01 15.63 23.45 6.68 22.81 57.12 0.00 0.00 19.13 26.82 15.89 45.16 18.16 17.41 6.14 37.75 13.29 26.72 40 ER1m ExonRegion 1 28416.36 55351.99 13640.83 11921.16 24833.61 32823.16 17878.77 3902.85 1284.52 3228.54 12975.55 177.51 239.19 12320.57 30718.46 17024.34 13695.42 6315.61 21055.25 7506.36 11221.29 9277.91 10918.44 41 ER1n ExonRegion 0 8682.52 17450.37 11052.97 8290.01 9787.00 10955.65 6031.08 3067.40 995.98 2450.13 6554.02 2126.16 1029.32 3303.28 6941.42 6146.27 5730.22 4231.29 8023.87 2872.05 5514.45 3355.26 3747.21 42 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 43 E1c_E2b KnownJunction 0 1123.98 5311.23 13233.39 7287.72 4219.95 1895.50 1661.05 3383.47 1166.89 2857.06 10861.91 4463.05 2907.44 3055.46 7296.14 4060.13 7920.05 2217.71 5330.69 2745.24 9982.30 2476.28 1991.35 44 ER2a ExonRegion 0 31.13 78.50 240.89 142.29 77.11 33.34 37.24 68.57 22.37 53.07 223.72 93.83 54.15 73.20 130.45 82.68 168.29 51.50 92.55 51.95 189.40 49.82 48.27 45 E2_Ab KnownBoundary 0 69.27 9.27 27.76 16.05 49.41 12.95 49.51 28.09 7.73 9.37 28.06 12.60 6.82 38.55 54.14 58.87 39.27 19.65 21.37 5.82 28.29 20.27 34.57 46 ER2b ExonRegion 0 455.12 2992.26 27053.59 21593.46 2428.26 1391.89 1335.12 6570.57 2119.60 5206.78 17986.99 6510.74 3809.89 10497.72 22644.83 15459.30 13809.09 7845.38 23540.05 6814.13 12919.58 9757.45 8550.91 47 E2_Da KnownBoundary 1 201.29 1907.16 35576.18 32268.99 2167.06 881.71 477.40 7907.78 2582.50 5992.42 15180.53 6399.59 3203.36 12372.89 33731.34 28386.57 10993.72 13115.56 37711.95 7794.83 10563.62 13324.84 15343.25 48 ER2c ExonRegion 0 132.60 2134.11 24200.08 16535.11 5072.84 5795.58 2502.21 5444.10 1843.74 4411.90 14489.35 5071.12 2279.36 5581.22 11954.11 9326.05 10508.65 6402.73 11329.23 4051.86 11984.87 4741.95 5207.78 49 E2_Db KnownBoundary 0 10.15 3.16 21.14 5.16 7.22 22.60 32.86 8.34 8.88 15.98 52.07 24.46 19.32 45.44 9.64 41.53 37.31 26.57 4.42 14.64 22.92 17.21 8.37 50 E2b_E3a KnownJunction 0 415.26 5407.39 27055.40 16199.84 19252.22 24004.81 12608.32 6169.61 1989.27 4715.16 12793.77 5107.66 2511.85 5641.09 10381.26 5740.89 8989.70 3192.08 9022.85 4638.85 9637.02 4649.64 2900.47 51 ER2d ExonRegion 0 27.51 20.03 20.05 15.37 21.97 21.13 32.93 10.86 7.55 14.36 47.52 26.30 13.98 49.85 31.00 48.36 37.00 19.85 22.52 19.98 19.09 21.22 19.06 52 ER3a ExonRegion 0 8406.65 25439.99 20628.63 16437.99 5961.74 10796.64 6422.60 4539.57 1523.96 3682.13 12792.37 5978.07 3315.16 5087.93 10009.46 6251.55 9360.61 3402.95 10633.63 3077.09 10069.61 4872.63 2887.61 53 E3_Da KnownBoundary 0 6746.97 5408.71 14125.34 11997.94 1124.96 700.05 567.67 3456.18 983.41 2433.32 4073.14 3026.79 1829.10 3779.64 6856.81 2256.25 2207.66 2200.93 2874.34 1522.25 2595.51 2186.40 1043.14 54 ER3b ExonRegion 0 19362.95 7770.79 8364.09 7625.89 2526.10 1659.89 1809.29 2066.61 625.06 1433.14 4624.55 3643.04 2063.73 4693.36 7855.76 4445.45 3080.91 1729.58 4467.78 2050.09 2939.75 2057.28 2746.25 55 E3_Db KnownBoundary 0 30305.37 10762.62 736.14 701.84 3389.48 2213.50 2712.21 397.02 113.42 258.68 3846.50 3853.11 2388.16 5121.16 9813.12 5369.36 3283.31 454.66 4908.85 2190.70 2626.09 2105.45 3522.76 56 E3_Dc KnownBoundary 0 41.56 23.48 5.20 3.93 8.66 5.79 6.76 2.55 1.56 1.45 29.53 0.00 0.00 3.00 6.30 26.15 28.61 2.36 19.20 16.30 12.60 40.60 13.06 57 E3_Dd KnownBoundary 0 23.41 91.50 74.30 43.88 11.46 15.39 16.96 19.63 11.08 21.49 39.22 29.71 0.00 18.89 6.30 14.36 0.00 72.38 84.71 40.40 32.00 49.29 49.60 58 ER3c ExonRegion 0 18022.14 5943.95 5823.94 5921.60 2099.39 1435.86 1639.73 1330.39 387.95 906.74 2777.77 2489.44 1563.66 3372.32 6410.90 3587.36 2213.25 1300.82 3473.96 1380.63 1898.05 1200.32 2418.03 59 ER3d ExonRegion 0 8957.10 2996.14 3181.06 3200.96 1032.84 740.85 895.00 678.13 213.67 493.17 1258.96 1363.78 891.11 1683.13 3319.03 1718.88 1108.00 683.05 1708.42 706.38 989.47 613.25 1252.97 60 ER3e ExonRegion 0 40.50 128.82 154.93 95.86 40.51 56.60 46.29 51.40 21.14 55.44 49.28 45.21 20.83 45.03 47.29 48.47 40.46 82.79 140.44 68.97 63.71 65.21 59.38 61 E3_De KnownBoundary 0 11.19 37.30 44.53 23.64 38.46 8.57 44.21 25.71 17.42 22.00 12.85 18.91 8.28 7.42 4.45 7.18 3.74 30.43 28.80 44.36 2.53 8.82 18.52 62 ER3f ExonRegion 0 7.45 18.94 22.10 10.26 10.07 11.34 13.14 8.77 6.11 9.73 2.83 5.14 2.02 3.94 2.61 2.79 3.22 11.15 14.04 12.59 4.34 2.76 6.44