Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CPNE9 Gene 0 1.71 3.96 25.12 12.97 5.56 36.57 7.18 11.32 9.06 4.41 0.42 0.00 0.00 0.09 0.09 0.07 0.43 6.41 0.77 4.51 0.43 0.05 0.45 2 383832 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 383831 Transcript 0 0.00 0.00 1.34 1.97 0.66 2.12 0.64 0.00 0.45 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.35 0.00 0.52 0.00 0.00 0.00 4 314846 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 491802 Transcript 0 0.73 0.00 0.75 0.00 0.31 3.39 0.07 0.01 1.30 0.89 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.60 1.33 0.00 0.00 0.00 6 273027 Transcript 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1c ExonRegion 0 0.47 0.00 0.69 0.00 0.00 11.11 0.58 0.79 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.05 0.00 0.00 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 1.57 0.00 0.00 8.52 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.66 0.00 0.00 5.19 0.00 3.67 0.21 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 12 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 2.21 0.13 0.03 1.14 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 1.19 0.00 0.00 0.00 15 E2_Ab KnownBoundary 0 0.00 0.00 5.50 0.00 0.00 4.49 1.85 0.00 2.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.14 2.90 0.00 0.00 16 ER2c ExonRegion 0 0.00 0.00 2.82 0.00 0.00 9.09 1.35 3.12 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.35 1.80 0.00 0.00 0.00 17 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 33.22 1.72 4.15 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.49 0.00 1.58 1.00 1.08 27.24 5.13 7.08 7.64 1.30 0.00 0.00 0.00 0.00 2.01 0.00 2.79 1.35 0.00 4.46 0.00 0.30 0.00 19 E3_Da KnownBoundary 0 3.78 0.00 3.02 0.00 3.40 8.52 0.00 0.00 6.28 2.74 0.00 0.00 0.00 0.00 0.00 0.00 3.46 0.00 0.00 5.88 0.00 0.00 0.00 20 E3a_E4a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 14.93 6.40 0.00 4.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.20 0.00 2.82 0.00 21 ER3b ExonRegion 0 1.47 0.00 0.28 0.00 0.62 4.56 0.00 0.00 1.46 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.51 0.00 0.00 1.47 0.00 0.00 0.00 22 ER4a ExonRegion 0 0.00 0.00 2.45 2.25 2.31 10.56 7.44 7.01 4.24 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 3.51 0.00 2.03 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 7.10 2.03 0.00 2.90 6.76 6.78 1.33 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5a_E6a KnownJunction 0 0.00 0.00 4.76 4.99 8.49 16.30 3.97 2.38 5.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 26 ER5a ExonRegion 0 0.00 0.00 6.54 4.09 5.35 12.84 6.62 8.64 4.94 4.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 27 ER6a ExonRegion 0 1.32 2.09 13.02 7.54 4.69 21.12 3.04 10.44 7.07 5.90 0.00 0.00 0.00 0.00 0.00 0.00 2.19 3.46 0.04 3.01 0.00 0.00 1.95 28 E6a_E7a KnownJunction 0 0.00 3.29 18.75 5.89 11.21 23.34 6.05 22.59 6.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 0.00 5.50 0.00 0.00 0.00 29 E7_Aa NovelBoundary 0 0.00 0.00 3.02 5.99 20.37 10.68 2.16 12.40 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.77 2.20 0.00 3.26 0.00 0.00 0.00 30 ER7a ExonRegion 0 0.10 2.92 16.68 5.81 8.74 33.12 6.91 19.53 14.47 1.18 0.00 0.00 0.00 0.00 0.00 0.00 1.44 7.02 4.63 9.51 0.00 0.00 1.97 31 E7a_E8a KnownJunction 0 0.00 5.39 26.58 8.86 4.33 72.80 3.80 16.76 18.69 4.08 0.00 0.00 0.00 0.00 0.00 0.00 4.77 1.74 3.67 2.68 0.00 0.00 3.33 32 ER8a ExonRegion 0 4.29 12.46 28.27 15.65 10.83 52.49 11.67 22.22 14.67 7.17 0.78 0.00 0.00 0.00 0.00 0.00 0.73 3.20 0.25 6.46 0.00 0.00 0.23 33 E8a_E9a KnownJunction 0 2.67 7.56 62.48 22.74 11.80 71.10 22.92 17.00 19.65 11.42 2.11 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 9.01 0.00 0.00 0.00 34 ER9a ExonRegion 0 1.51 10.61 46.52 20.47 14.19 59.71 20.70 18.45 17.28 7.44 1.20 0.00 0.00 0.00 0.00 0.00 0.00 10.21 1.55 11.08 0.00 0.00 1.43 35 E9a_E10a KnownJunction 0 3.78 14.60 36.78 13.25 40.66 87.68 19.39 17.83 15.60 1.24 5.37 0.00 0.00 0.00 0.00 0.00 0.00 3.77 0.00 4.92 0.00 0.00 0.00 36 ER10a ExonRegion 0 6.70 10.22 39.85 17.33 13.25 64.71 11.41 8.48 10.41 4.61 2.12 0.00 0.00 0.00 0.00 0.00 0.00 5.50 0.00 2.79 0.00 0.00 0.00 37 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER11a ExonRegion 0 3.17 8.37 45.36 18.37 11.06 64.57 10.90 10.50 12.42 6.46 1.23 0.00 0.00 0.00 0.00 0.00 0.00 14.82 0.00 0.53 2.50 0.00 0.00 39 E11a_E12a KnownJunction 0 6.59 21.31 38.50 35.36 12.99 115.16 22.30 26.45 19.56 10.07 2.58 0.00 0.00 0.00 0.00 0.00 0.00 16.33 0.00 3.00 2.97 0.00 0.00 40 ER11b ExonRegion 0 2.12 14.07 42.28 27.54 12.26 97.57 12.08 21.97 16.93 9.03 2.98 0.00 0.00 0.00 0.00 0.00 0.00 18.17 0.00 1.95 2.39 0.00 0.49 41 ER12a ExonRegion 0 4.04 17.89 36.53 29.68 10.46 74.95 15.94 18.08 14.11 7.58 1.15 0.00 0.00 0.42 0.00 0.00 2.93 17.69 0.00 7.60 0.69 0.00 2.56 42 E12a_E13a KnownJunction 0 3.19 15.33 32.08 15.55 20.46 84.78 14.18 11.87 8.97 6.07 0.00 0.00 0.00 2.47 0.00 0.00 0.00 14.05 0.00 10.80 0.00 0.00 0.00 43 E12a_E14a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E13_Aa NovelBoundary 0 7.19 0.00 15.79 5.49 0.00 2.90 1.99 0.00 2.86 4.32 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER13a ExonRegion 0 6.86 9.97 36.62 17.74 12.60 70.34 14.56 14.19 12.07 8.21 2.09 0.00 0.00 0.73 0.00 0.00 0.00 15.41 0.00 4.63 0.00 0.00 0.00 46 E13a_E14a KnownJunction 0 17.11 9.21 37.49 16.58 0.00 44.35 15.99 18.65 16.49 11.26 2.47 0.00 0.00 0.00 0.00 0.00 0.00 11.28 0.00 6.52 0.00 0.00 0.00 47 ER14a ExonRegion 0 4.32 4.85 42.05 23.46 3.13 74.99 24.45 19.60 17.79 9.88 1.44 0.00 0.00 0.00 0.00 0.00 0.21 14.51 0.00 4.16 1.17 0.00 0.00 48 E14a_E15a KnownJunction 0 0.00 5.99 42.67 23.41 11.80 144.35 37.41 14.87 18.03 6.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.84 0.00 5.56 3.09 0.00 0.00 49 ER15a ExonRegion 0 2.47 8.67 42.83 23.26 9.03 74.15 11.75 17.17 12.53 8.77 0.54 0.00 0.00 0.37 0.00 0.00 0.92 14.29 2.68 7.86 0.92 0.00 0.00 50 E15a_E16a KnownJunction 0 3.11 2.43 31.37 17.18 8.32 121.63 10.02 17.25 10.36 7.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.86 0.00 9.08 0.00 0.00 0.00 51 ER16a ExonRegion 0 2.76 2.80 47.78 20.77 7.65 64.05 8.10 18.49 17.44 6.59 0.00 0.00 0.00 0.52 0.00 0.00 0.00 13.73 3.28 7.83 1.76 0.00 0.00 52 E16a_E17a KnownJunction 0 3.63 3.03 36.87 26.44 19.27 57.13 8.35 25.55 11.63 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.92 4.80 8.18 0.00 0.00 0.00 53 ER17a ExonRegion 0 3.37 2.09 42.38 27.09 14.73 54.48 13.15 19.84 10.91 4.55 0.00 0.00 0.00 0.02 0.00 0.00 0.00 9.36 0.65 9.32 0.00 0.00 0.00 54 E17a_E18a KnownJunction 0 7.19 2.96 39.62 27.40 4.33 73.88 16.52 21.36 15.77 5.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.37 0.00 13.36 0.00 0.00 0.00 55 ER18a ExonRegion 0 5.44 5.56 42.54 23.81 5.95 59.62 11.05 16.86 13.79 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.79 0.00 9.03 0.00 0.00 0.00 56 E18b_E19a KnownJunction 0 3.78 3.35 59.67 34.29 22.84 39.07 7.82 27.15 10.30 6.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.59 0.00 3.26 0.00 0.00 0.00 57 ER18b ExonRegion 0 3.29 4.07 51.33 29.07 15.76 39.12 8.39 22.47 11.80 8.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.62 1.06 4.26 0.00 0.00 0.00 58 ER19a ExonRegion 0 0.80 2.28 53.87 30.46 6.33 31.77 6.75 25.41 14.27 9.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.16 2.07 8.86 0.00 0.00 4.05 59 E19a_E20a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 E19a_E21a KnownJunction 0 0.00 0.00 47.19 24.81 0.00 18.74 4.50 16.88 10.45 8.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 0.00 3.26 0.00 0.00 0.00 61 ER20a ExonRegion 0 0.00 0.00 2.69 3.94 1.31 4.23 1.29 0.00 0.90 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.70 0.00 1.04 0.00 0.00 0.00 62 E21_Aa NovelBoundary 0 0.00 8.29 13.72 6.99 0.00 2.67 0.00 0.00 0.00 1.45 0.00 0.00 0.00 2.24 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 63 ER21a ExonRegion 0 0.54 2.07 28.88 13.46 2.72 22.92 4.02 9.86 8.74 4.42 0.49 0.00 0.00 0.00 0.00 0.38 0.00 4.04 0.00 2.87 0.84 0.00 0.37 64 ER21b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00