Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 VHL Gene 0 136.36 188.53 216.26 194.38 173.65 143.31 163.54 128.00 74.43 75.56 177.77 150.58 168.27 202.50 166.70 124.51 151.56 152.83 140.98 157.54 58.70 111.70 134.06 2 256474 Transcript 0 30.74 48.72 55.11 40.35 53.01 153.27 111.92 39.02 32.94 26.59 81.67 35.79 82.46 91.73 74.20 91.75 80.44 94.19 82.68 75.97 49.93 38.37 104.47 3 442695 Transcript 0 0.00 0.00 0.00 0.00 0.30 0.61 0.44 0.58 0.00 0.38 0.64 0.00 2.08 0.18 0.32 0.99 0.00 0.00 0.35 0.00 0.00 0.00 0.00 4 345392 Transcript 1 0.00 29.73 11.95 8.86 18.76 31.23 26.41 22.63 11.46 10.61 38.33 5.85 0.00 21.37 29.54 0.00 18.05 12.19 4.42 15.53 8.65 3.06 14.26 5 450183 Transcript 0 0.42 0.61 2.08 1.36 0.00 1.83 1.59 0.86 1.61 0.34 3.87 0.00 0.00 4.06 4.64 1.49 1.65 3.88 3.50 2.34 0.88 1.25 2.35 6 477538 Transcript 0 21.98 69.29 73.10 55.23 23.50 26.67 44.69 21.42 13.50 24.79 53.34 22.80 30.68 54.43 43.17 67.27 44.61 165.88 80.40 134.44 23.10 14.02 43.90 7 ER1a ExonRegion 0 2.06 1.81 0.44 0.79 2.61 1.04 2.37 0.21 0.60 0.42 1.41 5.80 7.22 1.47 5.71 1.21 1.61 1.34 2.07 1.56 0.72 0.68 1.19 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.69 0.16 0.00 1.50 0.00 0.19 0.23 0.00 0.00 0.00 1.73 1.19 0.00 0.96 0.00 0.00 0.00 1.34 1.06 0.00 0.91 0.00 0.69 10 E1_Ac KnownBoundary 0 0.00 2.76 0.00 0.00 0.00 2.38 2.25 0.00 0.00 0.00 4.90 0.00 0.00 9.77 0.00 0.00 0.00 12.97 0.00 0.00 2.90 0.00 4.01 11 ER1c ExonRegion 1 65.61 51.79 28.63 14.06 38.84 188.88 95.41 15.44 11.36 17.97 88.82 8.23 7.82 84.75 71.18 68.16 57.93 89.83 56.33 64.54 43.71 7.01 66.76 12 E1_Ad KnownBoundary 1 131.50 73.54 78.62 58.97 97.54 273.19 143.18 53.19 47.63 52.49 99.60 6.30 0.00 68.04 103.22 94.42 78.35 321.39 147.30 114.54 65.67 20.57 150.07 13 ER1d ExonRegion 1 26.31 28.10 41.08 26.72 37.25 92.19 39.93 28.32 17.90 23.34 67.59 10.43 28.25 32.09 57.63 55.22 52.21 156.55 74.68 41.03 42.25 17.90 93.24 14 E1_Da KnownBoundary 0 0.00 9.14 37.11 16.08 15.79 104.54 33.25 23.99 18.78 24.01 77.97 6.15 39.61 21.48 26.70 49.30 52.55 78.76 40.57 20.39 83.77 16.66 103.63 15 ER1e ExonRegion 1 8.73 32.02 100.96 59.06 30.17 68.73 37.00 56.92 41.93 46.43 156.27 26.58 94.98 194.87 150.52 118.15 153.02 203.75 107.67 127.20 109.07 44.79 135.42 16 E1b_E4a KnownJunction 1 16.23 49.53 109.99 73.85 100.59 360.13 254.07 72.54 50.98 43.81 199.37 49.07 188.62 215.91 138.33 197.98 153.53 202.87 148.33 128.35 98.41 69.50 194.03 17 E1b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1b_E6a KnownJunction 0 0.00 29.73 11.95 8.86 18.76 31.23 26.41 22.63 11.46 10.61 38.33 5.85 0.00 21.37 29.54 0.00 18.05 12.19 4.42 15.53 8.65 3.06 14.26 19 E2_Aa NovelBoundary 1 1860.18 1740.35 1537.56 1730.78 1729.37 1137.07 2362.88 1984.86 1694.25 1445.28 617.26 281.04 315.08 261.58 533.41 1630.43 1317.44 2512.53 1532.56 2145.89 850.30 832.84 1511.52 20 ER2a ExonRegion 0 26.54 59.85 66.84 52.43 30.44 28.12 43.14 22.72 17.66 26.74 39.46 13.64 26.61 53.89 54.08 53.96 42.38 113.80 61.32 94.33 25.75 17.51 52.81 21 E2_Da NovelBoundary 0 59.49 22.89 86.16 49.14 7.47 5.79 11.17 27.15 23.35 15.31 14.95 0.00 6.82 16.48 39.31 40.42 52.36 27.15 26.17 26.46 5.68 16.53 65.64 22 E2a_E4a KnownJunction 0 17.41 78.74 79.36 58.03 16.55 25.21 46.24 20.13 9.35 22.83 67.23 31.96 34.74 54.98 32.26 80.58 46.84 217.96 99.49 174.56 20.45 10.53 35.00 23 E2a_E6a NovelJunction 0 0.00 9.21 5.53 2.00 4.16 5.62 7.42 0.00 0.00 3.33 2.00 0.00 0.00 17.25 0.00 0.00 8.79 6.34 7.15 0.00 0.00 2.94 0.00 24 I2 Intron 0 7.73 17.95 21.13 26.58 13.85 6.42 10.08 17.25 8.97 9.37 12.65 11.86 14.91 11.08 22.40 12.67 18.59 6.57 14.06 14.25 5.36 14.91 29.51 25 I2_SR1 SilentIntronRegion 0 7.76 18.00 21.19 26.66 13.89 6.42 10.10 17.30 8.99 9.39 12.69 11.90 14.95 11.12 22.45 12.71 18.61 6.59 14.11 14.29 5.38 14.95 29.60 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 0.85 1.22 4.17 2.73 0.00 3.67 3.18 1.73 3.21 0.69 7.73 0.00 0.00 8.12 9.28 2.97 3.30 7.76 7.01 4.68 1.76 2.50 4.70 28 I3 Intron 0 25.09 37.81 9.93 14.80 22.11 7.18 19.15 7.00 4.00 4.09 5.04 8.95 16.59 12.17 12.86 11.31 9.33 2.70 10.74 10.87 3.35 13.59 26.51 29 I3_SR1 SilentIntronRegion 0 25.14 37.89 9.95 14.83 22.16 7.19 19.19 7.02 4.01 4.10 5.06 8.96 16.62 12.19 12.89 11.34 9.35 2.71 10.76 10.90 3.36 13.62 26.57 30 E4_Aa NovelBoundary 0 60.53 39.93 43.88 37.62 35.23 21.52 22.57 34.21 20.83 10.74 10.06 12.60 34.58 14.30 22.62 19.40 35.06 15.42 44.24 40.01 23.41 19.53 45.16 31 ER4a ExonRegion 0 126.44 248.33 288.09 210.49 150.28 167.04 196.34 167.53 98.66 113.16 363.81 127.60 214.86 405.63 283.33 270.63 300.81 423.56 287.98 291.30 175.67 126.43 231.33 32 E4a_E6a KnownJunction 1 140.47 258.11 323.11 200.51 204.84 161.38 242.23 156.29 93.78 109.68 289.18 56.27 184.08 362.59 206.19 173.63 224.31 292.50 198.50 240.90 160.62 106.42 172.52 33 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.89 1.83 1.32 1.73 0.00 1.15 1.93 0.00 6.25 0.54 0.97 2.97 0.00 0.00 1.06 0.00 0.00 0.00 0.00 35 I5_SR1 SilentIntronRegion 0 10.72 41.93 11.23 12.49 10.65 1.33 18.20 4.66 2.00 3.71 2.80 5.16 12.57 0.97 13.31 5.38 1.19 1.99 9.22 6.16 3.19 16.58 8.50 36 I5_AR2 ActiveIntronRegion 0 19.34 25.93 26.46 28.18 5.50 6.94 12.00 14.91 7.16 4.87 15.57 5.87 11.60 2.69 14.69 8.34 20.94 8.34 12.09 20.43 8.70 10.96 29.71 37 ER6a ExonRegion 0 250.41 342.07 406.07 377.07 293.24 237.88 291.02 237.63 151.26 149.30 446.18 246.73 305.34 442.50 331.51 283.48 358.19 391.72 314.69 337.23 137.93 197.12 255.28 38 E6_Da KnownBoundary 0 402.66 582.59 402.59 465.18 383.45 350.08 469.41 300.99 186.46 147.82 381.25 228.22 412.31 326.92 341.06 190.89 358.77 132.24 199.82 385.29 37.62 248.79 192.58 39 ER6b ExonRegion 0 228.01 305.53 345.14 317.95 298.41 226.06 265.89 208.59 114.67 114.16 244.43 263.58 272.68 288.84 240.84 164.20 205.52 164.89 190.37 213.40 64.13 186.20 186.05 40 E6_Db KnownBoundary 0 205.00 130.77 83.50 96.16 146.69 134.87 148.87 58.49 52.43 55.26 47.75 27.01 34.25 23.31 29.92 95.45 77.61 42.99 71.72 43.14 48.06 55.17 51.73 41 E6_Dc KnownBoundary 0 0.00 8.81 4.88 6.09 3.48 2.10 8.08 0.00 0.00 0.00 0.00 0.00 0.00 7.30 16.81 3.59 13.56 2.36 12.89 2.94 0.00 2.57 8.62 42 ER6c ExonRegion 0 37.23 45.20 13.20 9.85 34.18 76.02 42.85 7.62 2.41 5.42 35.93 41.52 42.21 59.28 55.78 21.48 44.71 10.08 44.74 26.50 12.22 17.52 42.45 43 ER6d ExonRegion 0 73.92 94.83 54.88 46.42 55.84 98.63 79.33 44.31 47.23 35.55 44.22 52.49 51.52 57.80 78.57 76.07 86.18 78.34 97.64 98.01 50.67 44.93 118.19