Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC097662.1 Gene 0 4.81 11.60 7.27 4.90 5.76 7.13 5.31 2.52 2.13 3.81 2.21 5.26 2.01 2.35 2.89 3.31 1.81 3.34 3.64 3.51 5.95 3.62 2.96 2 433324 Transcript 0 1.74 1.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 396588 Transcript 0 3.57 5.20 2.19 2.84 4.78 2.63 4.34 0.93 0.84 1.45 1.62 4.01 0.65 4.17 0.41 4.45 0.95 5.84 2.21 3.67 5.41 2.41 2.40 4 439598 Transcript 0 0.33 0.54 0.36 0.61 0.85 1.24 0.67 0.00 0.35 0.60 0.03 0.24 0.00 0.24 0.70 0.22 0.25 0.43 0.00 0.48 0.68 0.36 0.19 5 437673 Transcript 0 0.00 3.35 9.96 2.06 0.00 10.90 6.01 8.38 1.30 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 8.45 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E3a KnownJunction 0 11.34 11.64 4.14 4.56 4.33 10.05 8.35 2.51 0.00 3.01 2.68 6.60 0.00 7.65 0.00 7.69 4.77 16.17 3.67 3.26 7.85 5.88 8.71 8 E1a_E5a KnownJunction 0 3.48 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 1.88 3.05 0.61 0.00 0.00 0.71 2.94 0.00 0.00 0.00 0.54 3.85 0.00 3.61 0.48 1.32 0.73 4.72 1.42 0.00 4.41 1.62 0.33 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Da NovelBoundary 0 0.00 3.35 5.62 1.47 0.00 20.05 2.25 0.00 1.79 0.00 2.68 0.00 0.00 0.00 0.00 7.78 0.00 2.53 0.00 0.00 2.97 0.00 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E3_Aa NovelBoundary 0 32.38 5.13 29.04 14.72 10.36 16.07 28.40 24.32 26.76 16.71 0.00 0.00 7.63 2.12 0.00 12.30 8.70 6.67 0.00 17.26 2.78 5.82 0.00 14 ER3a ExonRegion 0 28.09 19.96 12.37 9.05 14.23 20.67 24.30 11.39 8.78 13.41 13.04 9.52 6.05 7.68 20.62 25.84 19.45 20.51 27.21 23.36 21.64 10.80 22.91 15 E3a_E4a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 0.00 1.94 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 4.27 0.00 3.61 0.00 2.94 3.03 2.94 0.00 16 E3a_E5a KnownJunction 0 3.33 6.05 3.67 2.86 4.33 2.73 8.30 0.00 3.01 4.46 0.00 0.00 0.00 0.00 9.64 3.67 4.21 6.51 0.00 3.26 10.93 4.90 3.16 17 ER4a ExonRegion 0 6.52 1.71 2.46 0.54 3.72 3.08 1.40 2.17 0.00 1.24 2.71 7.28 3.25 8.61 2.06 2.76 0.00 2.57 2.68 1.30 2.16 0.88 3.28 18 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 2.36 0.00 0.00 0.00 19 Ix Intron 0 2.39 1.72 0.00 0.29 1.51 3.37 3.18 0.36 1.82 0.24 0.55 14.46 1.09 5.18 0.58 0.00 0.93 0.39 0.45 0.30 0.62 0.00 0.00 20 Ix_SR1 SilentIntronRegion 0 2.43 1.75 0.00 0.29 1.53 3.42 3.22 0.37 1.85 0.24 0.55 14.67 1.11 5.26 0.59 0.00 0.95 0.39 0.46 0.30 0.63 0.00 0.00 21 Ix Intron 0 2.65 2.18 0.33 1.82 0.96 0.98 0.95 0.00 0.00 2.14 0.69 10.44 0.69 9.76 0.73 0.00 2.36 2.30 0.57 0.76 1.97 0.37 0.53 22 Ix_AR1 ActiveIntronRegion 0 2.67 2.20 0.33 1.83 0.96 0.99 0.95 0.00 0.00 2.16 0.70 10.51 0.70 9.83 0.74 0.00 2.38 2.32 0.57 0.77 1.99 0.38 0.53 23 Ix Intron 0 1.45 1.05 0.00 0.70 1.84 1.57 1.36 0.00 0.63 0.88 0.33 7.48 2.65 9.23 0.00 1.02 0.00 0.47 0.00 1.46 0.00 0.72 0.50 24 Ix_AR1 ActiveIntronRegion 0 0.71 0.00 0.00 1.00 1.53 2.09 1.04 0.00 0.94 1.18 0.65 3.79 2.16 9.85 0.00 0.31 0.00 0.92 0.00 0.76 0.00 0.70 0.00 25 Ix Intron 0 1.24 0.21 0.44 0.63 1.29 3.80 2.06 0.80 1.14 1.12 0.13 13.42 1.09 10.93 0.28 0.51 0.68 0.32 0.55 1.03 0.15 0.14 0.41 26 Ix_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 3.70 1.69 3.54 1.63 0.00 1.85 0.00 12.16 0.00 10.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix_SR1 SilentIntronRegion 0 1.29 0.22 0.46 0.65 1.21 3.88 2.01 0.77 1.19 1.10 0.14 13.48 1.14 10.97 0.29 0.53 0.71 0.33 0.57 1.07 0.16 0.15 0.42 28 ER5a ExonRegion 0 3.37 10.38 6.85 4.48 3.45 5.91 6.28 1.53 1.64 4.07 2.25 12.89 4.58 5.80 6.85 5.18 0.54 7.71 2.11 2.99 2.46 2.96 0.03 29 E5a_E6a KnownJunction 0 0.00 0.00 3.90 7.09 3.99 13.86 5.79 0.00 3.24 5.24 0.00 12.30 0.00 0.00 0.00 0.00 0.00 2.28 0.00 5.31 2.97 5.02 0.00 30 E5a_E6b KnownJunction 0 0.00 0.00 0.00 1.96 3.40 2.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 31 ER6a ExonRegion 0 0.00 5.08 6.13 6.81 8.70 13.30 5.30 1.30 2.47 4.30 0.97 8.66 0.00 2.03 2.90 2.97 0.00 3.70 3.19 4.79 8.81 5.21 0.00 32 ER6b ExonRegion 0 1.15 7.78 7.34 8.64 9.54 9.37 3.15 4.23 3.65 3.44 0.97 4.94 7.09 2.37 0.47 4.78 0.00 9.40 3.19 2.73 10.28 7.43 0.80 33 E6a_E7a KnownJunction 0 0.00 6.51 4.79 11.42 8.40 5.11 6.40 0.00 2.86 1.67 5.37 7.65 0.00 7.42 4.45 16.66 0.00 15.75 0.00 2.56 8.09 2.63 4.35 34 E6a_E9a NovelJunction 0 0.00 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.21 0.00 35 ER7a ExonRegion 0 5.50 10.74 8.43 7.80 11.77 4.55 3.28 0.41 1.68 1.15 3.87 32.21 4.69 6.43 2.55 19.38 6.87 12.42 0.00 7.15 12.87 4.33 2.94 36 ER7b ExonRegion 0 3.49 5.48 4.42 6.19 4.55 3.46 2.82 1.03 2.01 0.24 0.56 8.07 2.81 5.65 2.65 4.09 2.85 3.95 2.94 3.46 9.85 6.61 0.03 37 E7_Db NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.61 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 8.83 2.76 7.34 38 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E7b_E9a KnownJunction 0 0.00 12.63 3.19 9.09 15.87 0.00 10.02 0.00 4.20 1.32 2.68 6.15 0.00 2.18 0.00 3.50 0.00 6.88 4.71 8.50 14.02 2.33 0.00 40 E8_Aa NovelBoundary 0 0.00 0.00 3.25 1.27 0.00 0.00 0.00 0.00 0.00 5.10 0.00 0.00 8.28 0.00 0.00 4.36 0.00 2.57 0.00 0.00 10.69 0.00 7.68 41 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 1.50 0.81 0.00 0.00 0.00 0.40 0.00 2.00 0.00 0.75 0.00 0.00 0.00 0.00 0.00 1.19 0.00 1.17 0.00 42 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER9a ExonRegion 0 3.47 13.60 2.13 5.30 20.62 6.97 4.73 1.50 2.79 2.82 2.31 5.96 3.46 2.69 0.05 2.00 2.76 1.58 2.35 2.51 16.47 1.84 2.46 44 E9_Da NovelBoundary 0 0.00 16.58 16.85 7.79 15.87 2.73 0.00 0.00 1.79 7.87 0.00 12.15 6.82 2.47 0.00 12.30 0.00 11.32 4.61 9.01 8.40 8.94 0.00 45 E9a_E10a KnownJunction 0 0.00 0.00 0.00 1.27 4.33 7.33 0.00 2.22 1.48 1.58 0.00 12.30 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 5.00 2.33 0.00 46 ER10a ExonRegion 0 6.49 29.20 7.91 8.31 14.47 10.25 11.48 3.24 3.48 7.44 3.82 13.20 1.48 0.96 3.37 2.53 2.98 1.76 4.39 3.72 2.87 9.55 1.78 47 E10_Ab KnownBoundary 0 14.67 49.60 17.74 15.25 25.64 20.50 29.72 8.79 6.68 7.31 4.58 6.30 0.00 0.00 0.00 4.36 4.30 0.00 3.76 11.25 2.78 9.00 3.24 48 ER10b ExonRegion 0 6.98 34.11 21.24 8.70 8.03 16.24 10.56 5.15 4.67 8.61 3.62 8.27 4.77 4.21 4.00 4.33 1.10 5.59 7.35 6.34 16.49 8.18 4.64 49 E10a_E11a KnownJunction 0 6.52 26.90 13.45 10.99 4.33 7.33 5.30 0.00 6.13 8.57 5.37 0.00 0.00 0.00 5.19 3.33 4.02 6.22 0.00 3.20 14.09 5.45 3.67 50 ER11a ExonRegion 0 8.55 22.37 14.84 6.26 9.11 18.04 7.06 5.80 3.50 5.83 1.09 5.51 4.11 2.21 4.46 4.51 1.46 3.97 1.53 3.53 15.22 5.21 7.40 51 E11_Da NovelBoundary 0 7.19 14.67 10.05 1.37 7.56 21.52 1.90 0.00 1.53 2.93 0.00 6.30 0.00 2.41 0.00 0.00 0.00 5.80 0.00 6.39 5.93 0.00 0.00 52 E11a_E12a KnownJunction 0 0.00 8.81 8.84 3.20 4.33 5.79 4.50 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.37 0.00 0.00 53 E11a_E13a KnownJunction 0 0.00 3.35 9.96 2.06 0.00 10.90 6.01 8.38 1.30 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 8.45 0.00 54 ER12a ExonRegion 0 2.52 5.42 7.63 6.30 5.77 4.88 2.91 1.36 0.34 2.20 1.24 2.29 0.00 0.12 1.31 0.27 0.00 0.59 0.58 1.56 1.02 0.38 1.62 55 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER13a ExonRegion 0 2.94 8.01 2.76 4.50 1.84 6.27 4.05 3.04 3.47 4.26 0.00 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.00 3.45 4.85 0.00 57 E13_Db NovelBoundary 0 0.00 0.00 1.74 0.00 0.00 25.55 16.08 9.32 1.24 4.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.95 2.49 2.84 0.00 0.00 58 E13b_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER13b ExonRegion 0 0.87 2.59 0.00 2.29 0.61 3.42 2.47 0.00 1.46 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 60 ER14a ExonRegion 0 0.71 0.00 0.00 0.68 0.00 1.23 0.01 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 61 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER15a ExonRegion 0 0.00 0.00 1.51 0.84 0.00 1.52 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER16a ExonRegion 0 0.00 0.00 0.52 0.00 0.27 0.53 0.00 0.00 1.05 0.00 0.55 0.00 0.00 0.38 0.00 0.00 0.00 0.78 0.00 0.00 0.00 0.00 0.00 65 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 4.16 5.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER17a ExonRegion 0 0.75 0.48 0.44 1.69 0.20 0.64 0.00 0.00 0.43 0.60 0.00 2.10 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00