Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC064874.2 Gene 0 0.90 4.67 2.02 2.24 4.09 1.87 16.09 2.41 1.41 2.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.74 1.90 7.41 1.50 0.35 3.00 2 440101 Transcript 0 0.00 1.01 0.55 0.00 0.40 1.18 4.18 0.40 0.28 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.83 0.48 2.04 0.33 0.00 2.34 3 409661 Transcript 0 0.55 1.27 0.91 1.30 1.52 1.03 9.42 0.85 0.14 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.57 0.76 4.33 1.01 0.30 0.64 4 ER1a ExonRegion 0 0.00 2.80 0.05 0.00 0.00 2.48 11.90 0.14 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.09 0.00 2.93 0.00 0.00 4.17 5 E1_Da NovelBoundary 0 0.00 5.26 1.66 4.96 0.00 0.00 18.64 2.14 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 4.35 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 Ix_AR2 ActiveIntronRegion 0 0.00 4.07 13.48 8.18 5.35 0.00 25.16 3.24 3.71 4.30 0.00 0.00 0.00 0.00 1.45 0.00 0.00 11.09 6.37 8.24 4.41 2.08 8.81 8 Ix_AR1 ActiveIntronRegion 0 1.18 5.12 7.86 6.50 3.20 2.46 19.08 4.21 2.92 4.32 0.00 0.00 0.00 0.00 0.46 0.00 0.00 7.70 4.27 10.40 3.85 0.54 7.44 9 E2_Aa NovelBoundary 0 6.74 0.00 7.57 2.06 4.33 0.00 22.74 0.00 4.83 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.84 4.42 3.00 0.00 0.00 3.84 10 ER2a ExonRegion 0 0.00 1.22 2.15 0.00 1.61 2.24 4.83 1.44 1.10 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.22 1.91 5.23 1.32 0.00 5.18 11 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 Ix Intron 0 1.49 2.23 5.69 4.64 3.29 3.86 19.23 3.84 4.52 4.05 0.00 0.00 0.17 0.00 0.31 0.00 0.00 9.11 2.52 11.77 2.80 0.82 6.19 13 Ix_SR1 SilentIntronRegion 0 1.49 2.24 5.70 4.64 3.29 3.87 19.27 3.85 4.53 4.06 0.00 0.00 0.17 0.00 0.31 0.00 0.00 9.13 2.52 11.79 2.81 0.82 6.20 14 E3_Aa NovelBoundary 0 3.48 0.00 0.00 13.48 17.15 0.00 69.60 4.39 6.22 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 3.67 6.01 0.00 0.00 0.00 15 ER3a ExonRegion 0 1.56 1.53 2.02 2.28 2.97 2.03 23.01 1.90 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.05 1.18 8.65 0.81 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 1.32 3.43 6.40 6.13 3.44 4.88 20.92 4.23 4.09 4.32 0.00 0.00 0.34 0.00 0.00 0.00 0.00 7.14 3.11 11.33 2.93 0.46 5.87 18 Ix_SR1 SilentIntronRegion 0 1.32 3.43 6.41 6.13 3.45 4.89 20.94 4.23 4.09 4.33 0.00 0.00 0.34 0.00 0.00 0.00 0.00 7.15 3.11 11.34 2.94 0.46 5.87 19 E4_Aa NovelBoundary 0 0.00 12.70 1.57 2.00 4.33 10.51 25.84 11.25 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.45 9.60 9.78 0.00 0.00 7.68 20 ER4a ExonRegion 0 0.62 3.53 1.60 2.94 3.12 2.11 14.65 1.50 0.54 1.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.22 1.86 8.68 3.21 1.21 2.57 21 E4_Da NovelBoundary 0 0.00 2.96 5.29 9.32 0.00 0.00 25.92 9.98 3.01 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.65 9.51 8.63 0.00 0.00 4.35 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 Ix Intron 0 1.35 3.24 4.95 7.77 6.40 3.80 25.95 8.21 6.75 5.18 0.00 0.00 0.00 0.00 0.65 0.00 0.00 2.93 2.03 9.16 1.40 0.00 0.94 24 Ix_SR1 SilentIntronRegion 0 1.36 3.26 4.98 7.82 6.44 3.82 26.12 8.26 6.79 5.21 0.00 0.00 0.00 0.00 0.66 0.00 0.00 2.95 2.04 9.21 1.41 0.00 0.94 25 E5_Aa NovelBoundary 0 7.56 13.42 1.83 1.96 23.09 0.00 95.30 5.79 9.84 9.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.66 0.00 0.00 0.00 26 ER5a ExonRegion 0 1.69 12.96 3.64 4.05 10.64 0.77 20.50 6.14 5.12 4.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 3.81 8.39 0.88 0.00 4.68