Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PNKD	Gene	0	50.32	11.37	50.00	24.42	24.72	43.67	21.51	43.00	40.48	37.03	85.62	8.38	15.57	64.90	178.58	33.44	84.78	21.78	38.95	15.85	55.44	37.36	46.53
2	248451	Transcript	0	25.93	3.73	20.46	11.55	13.04	20.36	15.81	9.01	6.67	11.09	10.84	2.95	0.20	36.68	37.60	16.55	7.84	14.37	10.65	9.34	16.96	3.13	6.08
3	273077	Transcript	0	0.00	0.00	0.65	3.40	0.00	0.00	0.00	7.23	14.50	1.86	0.00	0.00	0.00	0.00	1.45	0.74	0.00	0.00	3.76	1.63	0.00	0.00	0.00
4	469689	Transcript	0	6.52	0.88	3.71	3.16	1.26	2.05	3.16	3.55	1.96	2.20	4.19	0.70	0.39	2.72	3.47	2.91	1.30	3.30	3.75	0.70	4.99	0.96	3.28
5	472650	Transcript	0	0.96	0.21	2.61	9.65	8.07	30.61	3.15	6.99	6.07	9.54	0.00	3.47	0.00	1.21	1.07	1.05	1.15	4.89	4.38	1.21	1.29	0.64	6.01
6	494954	Transcript	0	0.85	0.22	0.50	0.08	0.88	3.06	0.74	1.87	0.85	0.34	0.00	0.00	0.00	0.01	0.00	0.32	0.03	0.03	0.35	1.40	0.00	0.00	0.28
7	258362	Transcript	1	2.49	0.00	7.02	1.04	0.00	2.53	0.26	8.56	5.56	4.83	19.60	3.34	4.69	8.79	43.97	2.05	34.31	0.18	12.73	0.46	14.61	6.45	19.16
8	436005	Transcript	0	0.91	0.93	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	483797	Transcript	0	5.82	0.34	3.13	4.06	0.00	4.43	2.49	5.20	6.36	1.65	10.00	3.66	7.65	14.00	23.63	1.99	19.23	4.11	14.23	4.21	11.92	15.11	14.40
10	460272	Transcript	0	11.00	2.28	5.46	3.56	1.72	8.06	2.93	5.58	10.19	5.56	3.44	0.01	1.47	7.26	20.76	4.00	11.22	1.12	6.90	1.96	5.30	10.50	14.39
11	ER1a	ExonRegion	0	0.00	0.45	0.00	0.00	0.00	1.95	0.72	0.59	0.17	0.65	0.14	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00
12	E1_Ab	KnownBoundary	0	0.00	3.35	0.00	0.00	0.00	5.22	0.00	2.42	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	0.00	1.74	1.02	1.17	0.00	8.02	1.40	1.73	1.41	1.70	3.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.09	0.00	0.00	0.00	0.00
14	E1_Ac	KnownBoundary	0	3.04	11.38	10.35	3.00	7.47	40.49	11.75	1.81	2.95	2.53	10.84	0.00	0.00	2.06	0.00	7.35	3.93	1.91	16.38	2.43	2.41	0.00	3.84
15	ER1c	ExonRegion	0	84.22	38.07	179.46	48.55	57.07	147.89	94.26	69.50	53.58	96.98	66.73	2.96	10.70	40.82	88.95	110.98	71.45	79.30	86.43	37.49	121.66	43.63	90.43
16	E1_Da	KnownBoundary	0	0.00	0.00	1.27	0.00	7.13	5.74	2.25	0.00	1.50	1.10	0.00	0.00	0.00	0.00	0.00	3.42	0.00	4.64	0.00	0.00	2.41	0.00	0.00
17	E1a_E1e	KnownJunction	0	122.24	56.77	152.98	65.96	40.41	89.49	82.28	88.14	52.37	92.08	65.44	0.00	25.65	24.43	68.11	86.47	46.75	174.52	118.40	45.25	50.78	25.53	102.69
18	ER1d	ExonRegion	0	6.52	0.88	3.71	3.16	1.26	2.05	3.16	3.55	1.96	2.20	4.19	0.70	0.39	2.72	3.47	2.91	1.30	3.30	3.75	0.70	4.99	0.96	3.28
19	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	1.86	3.74	0.00	0.00	0.00	0.00	1.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ae	KnownBoundary	0	0.00	0.00	3.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	2.16	0.00	0.00	6.05	0.00	0.00
21	ER1e	ExonRegion	0	69.85	40.67	210.76	68.14	26.76	102.69	59.58	89.88	62.99	128.45	61.85	4.33	28.14	25.99	55.12	80.25	42.91	138.58	92.38	31.91	57.30	33.34	91.04
22	ER1f	ExonRegion	0	40.33	25.81	298.19	119.49	26.22	69.00	38.60	131.77	91.17	178.01	216.36	31.83	20.41	124.65	184.28	134.44	164.36	215.47	254.56	110.84	283.24	76.58	111.75
23	E1b_E2a	KnownJunction	1	11.19	29.73	360.93	197.18	130.05	94.55	75.87	155.38	87.04	222.82	180.68	13.95	0.00	118.14	315.84	249.93	89.85	463.08	225.98	104.12	192.75	132.63	184.56
24	E1b_E4b	KnownJunction	0	0.00	0.00	1.15	10.72	6.62	22.71	0.00	2.22	3.10	9.11	0.00	6.75	0.00	2.41	0.00	0.00	0.00	4.60	0.00	0.00	0.00	0.00	8.37
25	E1b_E7a	KnownJunction	0	0.00	0.00	1.30	6.79	0.00	0.00	0.00	14.46	28.99	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.53	3.26	0.00	0.00	0.00
26	ER2a	ExonRegion	0	97.63	81.78	274.02	108.97	124.51	256.26	156.56	118.29	72.06	168.56	176.97	42.95	17.29	133.57	217.94	113.29	114.91	147.83	132.38	101.52	227.02	77.95	80.39
27	E2_Da	KnownBoundary	0	135.65	51.18	101.42	51.54	67.49	90.86	85.10	43.62	36.54	67.72	51.22	18.76	0.00	108.07	124.48	87.93	44.41	64.09	50.92	42.12	78.64	19.78	32.27
28	ER2b	ExonRegion	0	51.85	7.00	40.91	23.09	26.09	38.76	30.89	17.43	13.17	21.54	21.53	5.89	0.39	71.91	75.19	33.11	15.68	28.74	20.35	18.68	33.91	6.25	12.15
29	I2	Intron	0	11.97	2.88	1.52	3.04	2.89	2.44	5.40	7.50	5.97	3.98	1.45	2.16	0.64	0.79	3.96	1.73	1.65	2.90	3.18	3.36	2.20	0.35	3.66
30	I2_SR1	SilentIntronRegion	0	22.83	0.00	1.76	1.43	2.02	0.99	3.84	3.11	5.85	1.23	0.73	2.69	0.00	0.00	2.71	1.06	1.25	1.40	1.20	0.80	3.43	0.00	3.79
31	I2_AR1	ActiveIntronRegion	0	9.26	0.00	1.23	0.85	0.00	1.83	1.32	4.97	5.87	0.50	1.45	0.00	0.00	0.00	2.90	0.56	0.62	3.70	0.00	1.86	3.86	0.00	11.01
32	I2_AR2	ActiveIntronRegion	0	4.23	0.00	0.00	12.27	0.00	0.00	0.00	32.84	22.23	10.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.63	3.19	0.00	0.00	0.00	0.00
33	I2_SR3	SilentIntronRegion	0	10.45	4.88	1.81	4.31	3.78	3.63	7.29	10.18	6.38	6.14	1.91	2.66	1.09	1.10	5.57	2.52	1.40	3.27	4.04	4.81	0.62	0.59	3.32
34	Ix	Intron	0	20.76	1.60	5.73	3.19	5.25	3.60	6.75	4.04	3.61	5.36	3.79	1.40	3.03	14.65	12.72	4.66	2.59	3.61	0.00	9.18	7.76	8.17	5.76
35	Ix_SR1	SilentIntronRegion	0	21.08	1.62	5.81	3.24	5.33	3.65	6.86	4.11	3.67	5.45	3.85	1.42	3.08	14.88	12.92	4.74	2.63	3.67	0.00	9.33	7.89	8.30	5.85
36	ER3a	ExonRegion	0	0.00	0.66	0.60	0.00	0.86	3.60	1.73	4.19	2.39	0.56	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	1.04	2.09	0.00	0.00	0.00
37	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER4a	ExonRegion	0	2.55	0.00	0.91	0.24	1.78	5.60	0.48	1.42	0.16	0.47	0.00	0.00	0.00	0.04	0.00	0.00	0.08	0.09	0.00	2.13	0.00	0.00	0.83
39	E4_Ab	KnownBoundary	0	7.56	0.00	2.90	0.00	4.33	12.83	0.00	4.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.07	0.00	0.00	3.33
40	ER4b	ExonRegion	0	3.43	0.00	5.06	8.61	21.46	82.56	9.67	15.10	7.18	18.13	0.00	3.27	0.00	0.28	0.66	1.57	2.30	6.38	1.92	5.78	2.79	0.00	7.59
41	E4_Da	KnownBoundary	0	3.41	0.00	8.78	15.45	50.51	192.39	20.05	26.29	12.73	20.82	2.21	6.30	0.00	0.00	4.45	4.36	4.39	7.38	8.85	5.62	8.83	0.00	3.41
42	ER4c	ExonRegion	0	1.91	0.42	4.07	8.57	9.52	38.50	6.30	11.77	9.03	9.98	0.00	0.19	0.00	0.00	2.14	2.11	2.30	5.18	8.76	2.41	2.58	1.29	3.66
43	ER5a	ExonRegion	0	4.98	0.00	2.37	0.14	0.00	5.06	0.52	2.70	1.42	3.14	12.40	0.53	3.04	10.52	40.09	4.10	23.36	0.36	6.74	0.92	6.66	4.88	14.85
44	E5a_E7a	KnownJunction	1	0.00	0.00	11.68	1.93	0.00	0.00	0.00	14.42	9.69	6.53	26.80	6.15	6.33	7.06	47.84	0.00	45.25	0.00	18.73	0.00	22.55	8.02	23.47
45	ER6a	ExonRegion	0	1.81	1.85	0.00	0.00	0.00	0.00	0.00	0.09	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER7a	ExonRegion	0	7.74	1.91	9.16	6.18	12.85	25.72	3.62	25.27	25.49	10.44	58.24	1.94	5.22	45.31	142.74	13.84	74.18	2.26	13.37	9.63	27.66	19.24	29.06
48	E7a_E8a	KnownJunction	0	10.96	2.50	24.01	13.58	3.31	29.81	12.10	25.92	43.03	19.80	59.49	0.00	13.80	59.39	152.42	25.89	74.89	7.01	30.59	0.00	32.93	17.45	30.13
49	ER8a	ExonRegion	1	10.01	7.01	16.59	11.39	6.27	25.92	4.51	27.37	41.35	17.94	72.01	0.00	8.89	71.61	156.28	12.11	80.65	4.74	45.40	4.57	33.58	27.65	37.26
50	E8_Ab	KnownBoundary	1	6.89	2.83	9.11	8.89	0.00	27.88	4.20	38.98	39.41	16.73	63.86	0.00	19.97	41.67	91.97	7.09	58.53	5.72	29.74	15.66	50.60	21.68	19.38
51	ER8b	ExonRegion	0	3.45	1.64	6.15	5.13	1.98	20.97	3.54	27.17	35.87	13.41	49.20	0.75	9.28	40.78	130.18	14.02	42.70	0.68	19.67	5.13	29.75	11.10	19.02
52	E8a_E9a	KnownJunction	0	7.56	3.35	7.07	9.49	4.07	25.21	4.02	23.74	36.92	12.57	61.91	5.85	0.00	54.86	191.98	29.14	47.03	0.00	28.61	0.00	23.78	15.00	29.19
53	Ix	Intron	0	2.49	1.20	3.23	2.39	1.89	4.32	1.40	2.43	4.12	3.22	4.78	0.84	1.30	3.16	12.52	2.10	6.61	1.30	4.13	1.25	5.97	9.08	9.68
54	Ix_SR1	SilentIntronRegion	0	2.50	1.20	3.24	2.40	1.90	4.34	1.41	2.44	4.14	3.24	4.80	0.84	1.31	3.18	12.58	2.11	6.64	1.30	4.15	1.26	6.00	9.12	9.73
55	E9_Aa	NovelBoundary	0	6.96	0.00	9.70	2.06	8.32	10.39	0.00	9.04	9.98	0.00	2.26	5.70	13.64	4.47	10.01	13.07	8.04	0.00	8.47	6.52	8.15	3.12	18.69
56	ER9a	ExonRegion	0	14.06	2.24	15.00	9.86	8.48	13.09	10.77	33.98	33.81	15.07	84.92	4.84	14.07	83.16	184.30	28.11	119.62	3.32	26.67	1.73	36.19	22.49	28.32
57	E9_Da	KnownBoundary	0	16.67	3.16	5.80	5.29	0.00	0.00	8.57	11.50	12.36	4.03	10.16	0.00	0.00	17.19	27.81	3.85	22.16	9.20	0.00	0.00	12.42	10.84	24.24
58	E9a_E11b	KnownJunction	0	3.41	0.00	16.94	2.06	8.06	7.89	6.05	28.34	26.22	12.57	89.86	6.30	6.66	84.82	171.21	18.88	92.75	0.00	9.22	0.00	49.42	12.31	4.01
59	ER9b	ExonRegion	0	5.82	0.34	3.13	4.06	0.00	4.43	2.49	5.20	6.36	1.65	10.00	3.66	7.65	14.00	23.63	1.99	19.23	4.11	14.23	4.21	11.92	15.11	14.40
60	E9_Db	NovelBoundary	0	16.60	2.76	10.76	7.99	4.33	2.33	6.09	18.89	21.27	9.54	13.27	0.00	0.00	17.19	50.19	7.18	24.40	0.00	13.65	3.26	20.39	14.27	37.65
61	Ix	Intron	0	12.76	1.44	1.29	2.16	4.74	18.19	1.41	1.82	7.17	2.42	4.79	0.00	5.47	11.64	35.60	5.26	12.86	0.98	9.03	1.51	5.46	5.90	28.08
62	Ix_SR1	SilentIntronRegion	0	12.94	1.46	1.31	2.19	4.81	18.44	1.43	1.84	7.26	2.46	4.86	0.00	5.55	11.79	36.06	5.34	13.04	0.99	9.11	1.51	5.54	5.99	28.48
63	E10_Aa	NovelBoundary	0	16.45	5.99	17.98	8.49	7.47	17.32	9.98	17.91	6.22	9.75	14.00	6.30	6.33	30.78	29.05	4.36	8.32	1.74	34.92	12.59	18.53	33.68	35.00
64	ER10a	ExonRegion	0	11.94	2.72	7.08	4.89	2.15	13.21	2.77	9.47	13.70	5.99	5.74	0.00	3.11	14.16	28.74	5.58	18.42	1.24	12.84	2.86	8.79	15.46	23.45
65	E10_Da	NovelBoundary	0	30.52	0.00	16.06	7.96	10.87	16.52	8.13	14.17	22.95	11.39	7.32	0.00	6.82	11.95	36.47	3.67	38.34	5.10	12.99	2.88	22.49	24.25	54.29
66	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	Ix	Intron	0	6.26	0.00	0.00	0.00	3.96	12.20	1.96	0.00	0.00	0.00	1.43	0.00	0.00	2.68	12.74	2.20	7.32	0.00	11.77	0.00	1.63	7.70	8.68
68	Ix_SR1	SilentIntronRegion	0	6.96	0.00	0.00	0.00	4.10	13.46	2.18	0.00	0.00	0.00	1.59	0.00	0.00	2.93	13.76	2.11	7.83	0.00	13.10	0.00	1.81	8.47	9.33
69	E11_Aa	NovelBoundary	0	25.71	0.00	14.78	7.33	3.65	18.40	5.92	9.28	14.55	7.82	5.32	0.00	0.00	20.13	49.94	3.76	18.14	0.00	8.75	5.05	4.88	19.35	29.54
70	ER11a	ExonRegion	0	21.04	4.12	9.29	5.78	3.02	10.98	4.27	7.27	16.87	10.68	4.57	0.03	1.31	7.61	33.54	6.42	15.24	2.13	7.87	3.04	7.10	16.03	19.73
71	E11_Ab	KnownBoundary	0	32.15	12.23	17.15	3.60	8.06	24.08	7.68	3.49	22.95	14.29	6.90	0.00	0.00	7.42	45.24	7.95	16.08	2.36	17.69	2.75	17.85	9.31	25.35
72	ER11b	ExonRegion	1	21.97	3.47	19.41	5.21	11.46	16.68	8.86	24.37	36.78	23.94	90.99	2.54	4.59	86.94	229.67	29.85	95.22	6.79	23.75	8.58	54.40	33.36	36.68
73	E11a_E12a	KnownJunction	0	26.82	8.95	12.06	9.49	11.88	20.16	4.20	34.17	34.46	22.19	114.03	12.60	6.82	83.29	210.64	28.88	99.11	7.92	33.88	6.07	46.46	44.88	49.94
74	ER12a	ExonRegion	1	21.47	4.14	24.82	8.88	15.87	19.71	8.12	35.81	36.57	25.51	110.51	5.30	2.96	91.35	242.02	33.90	120.90	6.86	29.29	7.45	62.28	35.39	32.82
75	E12b_E13a	KnownJunction	1	37.04	6.51	21.88	16.08	31.58	32.82	12.06	40.17	46.76	25.20	116.61	13.35	0.00	65.51	240.44	18.63	74.52	4.68	12.71	21.03	44.17	29.09	30.30
76	E12b_E14a	NovelJunction	0	3.78	0.00	2.75	1.47	0.00	0.00	0.00	2.55	3.10	0.00	12.69	0.00	0.00	0.00	13.97	0.00	0.00	1.87	0.00	2.68	0.00	0.00	0.00
77	ER12b	ExonRegion	1	28.04	4.07	22.36	13.97	19.40	28.88	11.58	33.70	36.74	22.08	104.86	8.66	0.00	70.24	216.87	23.03	81.70	5.54	21.50	14.89	43.52	32.82	21.29
78	ER13a	ExonRegion	1	29.87	2.57	23.89	17.01	19.38	22.70	12.69	48.46	41.10	32.80	124.68	3.93	4.64	79.23	260.75	28.18	118.49	7.94	30.79	8.24	71.73	45.60	57.42
79	E13a_E14a	KnownJunction	1	31.71	0.00	36.43	10.02	37.01	21.18	16.61	56.48	42.91	50.42	133.03	6.30	0.00	72.69	246.00	24.27	113.98	9.37	36.52	15.60	71.35	44.64	69.91
80	ER14a	ExonRegion	0	24.83	3.58	27.44	13.61	19.72	29.89	11.05	36.46	35.47	27.64	100.06	7.05	7.64	65.54	207.66	26.88	105.91	7.69	26.91	8.51	51.71	39.41	40.40
81	E14a_E15a	KnownJunction	1	24.30	0.00	20.43	11.05	11.71	26.18	10.60	40.38	47.68	31.97	94.60	0.00	13.64	67.16	241.80	7.69	83.12	10.61	51.67	12.21	45.16	43.72	56.60
82	ER15a	ExonRegion	1	18.46	2.62	25.16	10.21	15.56	20.70	7.81	33.09	39.59	27.73	94.93	0.25	5.23	81.21	207.41	18.79	91.40	11.07	30.10	7.31	51.88	36.84	50.31
83	E15_Da	KnownBoundary	0	46.30	8.75	29.95	11.75	28.52	35.89	12.85	33.97	39.29	22.05	60.96	0.00	0.00	78.52	220.16	27.69	99.49	11.36	28.99	11.95	43.43	32.33	35.94
84	ER15b	ExonRegion	0	109.98	12.07	49.39	31.14	36.29	47.26	19.94	70.14	74.47	43.09	152.80	11.99	37.36	114.69	363.38	46.98	160.16	8.09	45.30	11.17	63.15	68.59	83.28
85	ER15c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.57	0.00	0.00	0.00	0.00	2.90	1.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00