Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ZNF142	Gene	0	29.09	29.54	64.09	48.47	28.95	72.56	49.57	60.93	54.76	108.05	102.29	50.33	56.13	117.39	91.52	103.88	93.37	156.11	75.07	93.17	57.61	32.89	42.79
2	450765	Transcript	1	12.92	3.46	2.47	2.67	6.29	26.08	13.71	0.93	3.81	7.34	35.02	6.48	0.24	22.15	21.30	33.86	33.12	20.39	30.98	16.26	19.27	6.48	20.23
3	432460	Transcript	0	5.09	2.37	10.27	6.43	2.76	15.52	10.57	12.92	15.26	25.19	28.72	12.07	10.56	29.66	18.48	36.06	17.99	42.67	17.86	24.78	11.23	6.71	8.59
4	411696	Transcript	0	0.81	0.00	0.03	0.00	0.00	0.31	0.25	0.00	0.00	0.41	2.67	0.00	1.34	0.04	0.00	1.42	0.00	0.00	1.59	0.05	0.05	0.00	0.00
5	449707	Transcript	0	0.00	2.76	1.83	3.33	0.00	2.33	8.21	2.18	4.66	2.95	7.58	0.00	0.00	4.89	4.82	15.21	8.79	13.64	13.37	11.76	5.68	5.39	21.00
6	433921	Transcript	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	1.71	3.92	7.00	18.46	6.82	7.53	10.14	12.22	8.23	12.02	4.33	3.26	3.15	0.00	12.38
7	450560	Transcript	0	0.00	0.00	1.12	1.90	6.96	0.00	4.11	0.00	1.30	0.00	9.74	6.30	13.47	9.36	0.00	4.36	0.00	2.49	0.00	0.00	5.62	5.88	0.00
8	336124	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	396788	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	440934	Transcript	0	7.03	9.92	19.72	13.22	9.94	30.32	17.36	30.34	34.23	64.56	73.84	30.72	32.19	59.12	38.49	60.06	54.39	98.29	57.79	64.13	19.39	14.72	18.71
11	ER1a	ExonRegion	1	12.92	3.46	2.47	2.67	6.29	26.08	13.71	0.93	3.81	7.34	35.02	6.48	0.24	22.15	21.30	33.86	33.12	20.39	30.98	16.26	19.27	6.48	20.23
12	E1_Ab	KnownBoundary	0	3.78	8.75	2.93	5.49	8.23	18.23	5.74	0.00	3.24	7.95	13.37	6.30	0.00	4.89	6.30	23.58	12.16	15.09	25.69	17.51	13.34	0.00	28.85
13	E1_Ac	KnownBoundary	0	3.78	0.00	0.00	0.00	0.00	0.00	0.00	2.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	17.26	4.77	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	8.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	4.35
15	ER1b	ExonRegion	0	10.58	14.24	9.80	5.45	8.03	45.84	47.66	5.19	12.35	22.94	48.32	17.32	9.38	43.85	40.62	86.19	56.12	68.37	73.26	34.04	37.46	10.42	55.80
16	ER1c	ExonRegion	0	11.79	15.11	10.68	7.59	11.09	50.43	51.92	5.19	12.35	21.63	51.22	18.25	9.38	50.81	38.34	84.71	50.22	68.37	74.63	34.80	34.31	15.92	58.52
17	E1_Ae	KnownBoundary	0	3.78	6.38	5.50	10.12	12.99	27.09	23.63	4.11	10.10	12.22	12.21	17.11	0.00	9.30	14.09	19.48	4.21	47.42	26.17	17.58	11.61	11.57	12.12
18	ER1d	ExonRegion	0	11.64	10.26	8.86	5.95	11.19	42.84	55.67	5.19	10.89	17.72	38.13	8.66	9.38	43.63	28.35	44.72	39.31	63.58	49.23	25.44	29.65	18.18	32.04
19	E1_Af	KnownBoundary	0	9.11	2.96	5.06	2.86	3.65	4.94	35.95	5.75	3.85	12.65	18.06	0.00	0.00	4.89	0.00	0.00	24.96	10.65	15.81	8.50	8.09	8.57	0.00
20	ER1e	ExonRegion	0	6.84	5.94	5.70	5.56	8.44	23.98	36.41	2.79	5.37	11.20	16.80	2.00	0.72	8.81	8.03	12.00	19.04	29.21	20.46	13.67	20.77	10.10	9.49
21	ER1f	ExonRegion	0	2.31	2.05	5.45	4.78	2.55	5.26	10.06	3.07	5.51	15.03	23.38	13.96	1.40	28.20	27.63	14.78	40.72	10.10	22.60	17.76	22.14	9.44	13.23
22	E1_Da	KnownBoundary	0	0.00	0.00	0.00	1.86	0.00	2.38	0.00	2.55	1.27	2.95	12.85	0.00	6.82	2.65	4.45	11.02	4.77	8.71	12.89	5.37	3.15	0.00	0.00
23	E1a_E1g	KnownJunction	0	7.26	0.00	5.06	4.93	0.00	11.13	3.84	9.00	5.47	28.74	23.53	13.95	6.33	40.08	28.93	32.73	21.69	29.14	30.12	18.02	19.40	8.08	16.56
24	E1a_E1h	KnownJunction	0	0.00	2.76	1.83	3.33	0.00	2.33	8.21	2.18	4.66	2.95	7.58	0.00	0.00	4.89	4.82	15.21	8.79	13.64	13.37	11.76	5.68	5.39	21.00
25	ER1g	ExonRegion	0	4.28	4.51	10.25	7.25	0.00	14.40	1.10	2.82	8.43	12.11	21.92	1.48	4.69	20.56	20.17	31.82	10.95	31.95	25.64	17.44	3.71	5.49	12.10
26	E1_Db	KnownBoundary	0	7.26	7.76	18.69	7.86	0.00	47.70	2.12	10.60	15.71	20.98	22.74	6.00	0.00	28.43	39.06	59.64	21.60	55.05	28.99	31.77	6.12	11.27	35.77
27	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER1h	ExonRegion	0	5.09	2.37	10.27	6.43	2.76	15.52	10.57	12.92	15.26	25.19	28.72	12.07	10.56	29.66	18.48	36.06	17.99	42.67	17.86	24.78	11.23	6.71	8.59
29	E1_Ag	KnownBoundary	0	3.78	15.26	20.37	15.65	0.00	11.36	14.35	4.23	21.50	23.58	32.64	0.00	6.82	36.08	28.93	36.74	15.71	19.69	24.28	20.07	11.31	3.06	4.35
30	ER1i	ExonRegion	0	7.46	8.82	12.90	7.30	2.34	28.90	8.32	20.76	20.40	47.89	31.60	30.35	30.56	46.98	33.20	59.00	27.80	40.28	34.97	38.66	18.28	19.30	26.46
31	E1_Ah	KnownBoundary	0	7.04	6.58	20.61	14.02	4.33	86.77	20.71	25.75	17.39	37.66	36.90	44.41	47.40	61.33	32.76	70.75	38.99	88.54	32.85	52.41	11.98	31.90	7.68
32	ER1j	ExonRegion	0	9.89	9.35	25.22	14.17	11.24	58.88	29.80	31.96	23.85	55.91	74.96	51.17	60.63	97.48	79.97	62.74	68.06	84.66	63.82	90.02	38.42	36.29	44.26
33	E1_Dc	NovelBoundary	0	0.00	0.00	1.36	5.66	3.99	5.74	0.00	4.60	11.14	7.63	22.32	0.00	0.00	12.13	14.59	4.02	34.32	13.68	4.05	17.32	0.00	0.00	3.24
34	E1c_E2c	KnownJunction	0	16.89	11.91	41.31	5.06	7.64	65.59	40.06	41.40	31.22	69.95	75.55	56.57	80.51	103.01	78.25	88.69	64.42	146.58	61.84	91.27	75.18	43.97	32.61
35	E1c_E2d	KnownJunction	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	1.71	3.92	7.00	18.46	6.82	7.53	10.14	12.22	8.23	12.02	4.33	3.26	3.15	0.00	12.38
36	E1c_E3a	KnownJunction	0	0.00	0.00	1.12	1.90	6.96	0.00	4.11	0.00	1.30	0.00	9.74	6.30	13.47	9.36	0.00	4.36	0.00	2.49	0.00	0.00	5.62	5.88	0.00
37	ER2a	ExonRegion	0	1.61	0.00	0.06	0.00	0.00	0.61	0.50	0.00	0.00	0.82	5.34	0.00	2.68	0.08	0.00	2.83	0.00	0.00	3.19	0.10	0.10	0.00	0.00
38	ER2b	ExonRegion	0	14.82	12.20	31.86	8.18	10.70	60.52	31.78	34.57	32.11	66.52	75.38	56.28	65.66	103.94	81.24	65.39	49.51	88.69	63.71	87.23	61.70	33.34	35.24
39	ER2c	ExonRegion	0	9.09	10.44	37.38	11.14	5.35	35.38	23.27	28.53	31.52	69.78	44.15	49.13	51.65	54.74	35.94	45.18	34.29	91.11	47.57	64.40	39.31	17.56	12.26
40	E2_Ad	KnownBoundary	0	0.00	6.31	15.20	9.36	0.00	5.17	9.05	18.98	23.99	30.19	18.48	6.15	6.66	2.24	11.87	27.00	22.44	75.94	3.58	30.23	17.17	7.78	3.33
41	ER2d	ExonRegion	0	22.99	18.95	44.36	17.06	20.76	52.76	62.84	54.34	52.23	100.79	116.50	81.18	93.24	128.84	67.43	88.63	97.08	181.26	97.28	122.83	71.58	42.44	35.06
42	E2a_E3a	KnownJunction	0	15.71	28.48	59.90	24.27	39.73	61.10	56.79	60.63	50.84	110.27	96.13	114.79	59.25	132.44	80.60	113.65	101.17	189.03	78.59	120.61	62.95	56.21	55.57
43	ER3a	ExonRegion	0	19.33	18.54	51.65	25.96	23.60	52.10	47.73	51.15	54.95	113.11	81.31	69.77	102.03	127.51	71.77	92.53	93.51	114.35	85.43	103.31	65.82	36.62	39.38
44	E3_Ab	KnownBoundary	0	20.45	6.71	27.62	22.21	29.97	40.72	31.00	22.55	36.98	84.48	65.12	55.67	59.74	48.56	40.05	63.74	47.50	48.13	49.60	84.88	31.26	29.27	12.72
45	E3_Da	KnownBoundary	1	44.45	14.41	34.86	9.09	45.67	37.88	40.89	46.17	33.85	63.66	67.44	118.09	64.93	76.58	15.20	117.06	53.11	119.01	125.84	75.36	59.00	46.11	33.72
46	ER3b	ExonRegion	0	32.67	14.87	40.05	18.82	30.10	46.65	39.47	45.70	47.24	112.54	86.86	112.30	89.40	93.79	38.80	91.02	64.37	83.15	102.13	97.34	66.25	43.36	28.27
47	ER3c	ExonRegion	0	35.58	24.24	29.28	9.80	23.50	59.52	38.61	39.61	31.98	86.27	101.19	115.26	85.31	124.84	64.93	102.90	97.87	91.09	103.83	95.00	69.15	48.77	29.60
48	E3_Db	KnownBoundary	1	12.52	21.51	7.81	9.76	7.81	73.37	27.43	13.84	17.16	53.54	64.65	42.61	66.39	93.30	69.84	59.04	133.99	66.12	50.92	68.52	54.30	22.90	15.28
49	ER3d	ExonRegion	0	8.93	18.73	20.83	17.87	18.40	49.95	38.28	35.55	36.68	86.33	90.90	60.59	59.59	92.78	56.41	83.32	102.31	151.40	74.74	87.26	59.78	33.46	29.00
50	E3_Dc	NovelBoundary	0	13.19	5.99	12.03	9.49	12.99	0.00	21.77	7.02	7.70	11.82	16.53	12.45	6.82	27.37	6.06	33.50	25.06	21.85	0.00	15.21	14.52	2.51	11.52
51	E3c_E4a	KnownJunction	0	0.00	6.12	17.09	9.16	8.66	24.59	4.37	27.72	30.38	63.45	84.92	27.46	27.27	47.80	35.60	60.16	50.12	102.93	59.30	63.85	10.26	12.00	15.71
52	E3c_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	15.56	0.00	0.00	2.69	5.35	7.37	0.00	0.00	13.77	0.00	3.25	0.00	6.14	4.52	9.33	2.72	0.00	3.24
53	E3c_E5a	KnownJunction	0	2.89	3.09	0.00	3.13	3.31	2.73	0.00	0.00	6.66	18.19	6.95	5.40	6.33	2.47	0.00	7.69	24.96	8.33	8.28	9.33	26.44	18.80	19.29
54	I3	Intron	0	8.61	5.27	8.33	13.00	13.34	10.83	28.24	10.73	7.85	12.27	11.61	21.15	28.41	21.27	13.27	15.70	20.04	11.77	10.55	14.59	8.82	7.99	8.38
55	I3_AR1	ActiveIntronRegion	0	8.11	4.41	9.49	18.41	15.90	19.31	29.25	12.30	8.90	16.29	19.74	29.95	36.64	35.64	18.75	25.33	35.53	23.68	18.48	20.49	19.32	9.37	11.99
56	I3_SR1	SilentIntronRegion	0	8.97	5.58	7.36	9.56	12.30	7.33	28.20	9.93	7.26	10.01	7.32	17.17	24.35	13.60	9.74	9.70	12.86	5.93	6.05	10.65	3.05	6.59	5.72
57	I3_AR2	ActiveIntronRegion	0	7.47	6.31	12.87	22.60	12.04	6.28	24.34	11.72	9.07	16.46	16.89	20.11	31.02	31.55	23.60	31.36	19.63	14.72	19.05	26.99	17.79	16.06	18.69
58	E4_Aa	NovelBoundary	0	6.59	3.22	26.11	12.42	4.33	7.50	6.05	16.72	29.25	35.78	14.32	36.31	19.80	32.96	25.47	40.93	16.74	26.65	29.27	59.63	5.44	15.00	28.68
59	ER4a	ExonRegion	0	14.06	13.71	22.34	17.28	11.22	36.05	30.36	32.96	38.08	65.68	62.77	33.98	37.12	70.44	41.38	59.97	58.66	93.65	56.28	64.40	28.53	17.44	21.72
60	E4_Ab	KnownBoundary	0	7.04	14.27	19.54	10.29	0.00	32.65	43.77	17.91	23.03	43.81	36.48	18.16	26.95	37.79	20.40	51.87	79.66	62.22	35.01	48.83	20.26	19.96	32.18
61	ER4b	ExonRegion	0	8.08	16.03	24.74	20.63	8.76	51.98	40.48	25.48	30.78	58.18	70.54	31.34	26.71	80.31	58.60	61.09	57.67	90.92	47.07	78.30	32.16	16.27	17.30
62	E4a_E5a	KnownJunction	0	13.78	21.31	33.97	22.27	8.40	67.46	30.87	33.56	37.93	61.08	76.97	36.01	13.64	80.11	44.63	35.29	48.25	104.13	33.04	68.33	22.67	22.23	23.05
63	I4	Intron	0	14.18	6.57	7.30	10.50	7.70	8.30	14.55	4.84	7.89	8.54	6.13	8.24	8.55	7.48	5.75	10.13	8.73	4.81	7.30	6.50	8.28	4.90	10.87
64	I4_SR2	SilentIntronRegion	0	20.43	10.63	8.50	13.84	6.99	8.33	18.34	4.68	7.74	9.32	7.25	10.95	11.70	7.86	6.44	11.48	12.00	6.05	7.96	6.53	11.00	6.39	12.68
65	E5_Aa	NovelBoundary	0	23.34	5.79	17.03	10.65	8.66	4.83	30.52	9.36	7.06	11.36	2.63	0.00	0.00	7.36	10.01	11.62	12.25	6.80	0.00	2.88	11.61	0.00	11.44
66	ER5a	ExonRegion	0	23.12	18.46	35.44	22.28	11.32	63.69	41.09	28.19	42.18	77.55	84.97	47.29	40.23	90.08	48.32	49.50	90.14	112.57	29.89	82.57	51.96	34.86	43.82
67	ER5b	ExonRegion	0	20.69	19.79	37.60	36.19	28.74	54.16	61.81	41.80	56.40	119.92	122.59	59.70	62.72	152.39	84.73	127.57	124.60	179.80	101.46	106.08	59.89	40.32	51.31
68	E5b_E6a	KnownJunction	0	20.97	29.47	56.24	25.60	14.77	58.26	48.45	59.02	54.43	97.83	123.45	50.27	47.24	113.01	118.43	62.38	103.97	153.79	90.83	113.39	58.87	43.90	50.45
69	ER6a	ExonRegion	0	25.89	26.19	45.01	36.29	27.88	71.44	47.69	55.52	61.66	128.48	127.28	64.57	86.93	144.83	96.32	117.64	110.23	188.05	96.96	117.10	75.76	35.56	48.05
70	E6a_E7a	KnownJunction	0	24.97	22.63	38.82	44.35	35.74	69.11	42.04	85.93	67.53	128.51	123.66	167.30	91.71	154.75	122.63	128.17	139.69	220.49	107.86	154.62	82.91	62.34	60.95
71	E7_Aa	NovelBoundary	0	12.89	2.50	7.86	17.88	4.33	0.00	11.13	1.64	4.77	5.00	2.21	0.00	0.00	4.94	0.00	3.76	0.00	7.71	18.82	5.75	0.00	0.00	8.71
72	ER7a	ExonRegion	0	31.76	33.93	63.66	68.52	35.55	95.75	61.45	82.86	75.90	153.67	163.72	108.12	90.51	194.26	127.48	152.38	149.28	283.12	122.44	164.68	86.37	45.93	73.09
73	E7a_E8a	KnownJunction	0	45.42	42.95	67.98	90.80	29.29	95.29	49.86	77.84	66.72	144.28	160.15	107.74	127.75	226.74	139.69	192.94	139.88	301.82	98.17	162.67	69.93	64.97	110.89
74	ER8a	ExonRegion	0	32.20	31.92	75.28	54.69	30.44	86.55	53.11	72.46	61.68	125.35	115.53	51.39	53.49	138.13	100.38	119.96	104.81	172.49	79.75	95.14	66.82	36.16	51.65
75	E8a_E9a	KnownJunction	0	86.90	114.72	137.81	83.17	39.47	100.28	64.48	84.45	74.39	153.84	120.45	35.26	20.13	145.62	189.26	108.86	113.04	189.82	61.46	134.42	67.40	40.72	56.51
76	E9_Aa	NovelBoundary	0	15.63	2.76	8.69	7.29	7.56	14.20	8.52	18.24	14.79	4.46	0.00	0.00	0.00	2.47	5.19	11.45	4.49	0.00	0.00	0.00	0.00	5.45	3.67
77	ER9a	ExonRegion	0	59.12	77.20	144.77	95.99	63.36	104.65	88.28	105.37	92.44	154.24	151.91	76.05	73.85	138.85	165.86	124.94	121.51	228.75	83.06	123.44	84.34	49.98	63.22
78	E9_Da	NovelBoundary	0	3.11	12.96	16.44	7.79	19.44	2.21	10.42	9.16	7.84	10.96	0.00	0.00	13.64	5.36	5.19	0.00	9.26	17.82	7.91	2.88	0.00	2.69	4.35
79	E9a_E10a	KnownJunction	0	66.83	68.01	157.42	101.95	76.99	143.55	92.61	115.75	85.88	161.60	166.31	54.17	118.66	117.14	175.54	146.71	120.06	307.42	85.18	132.44	113.24	41.21	94.24
80	E10_Aa	NovelBoundary	0	0.00	3.35	22.97	16.02	0.00	7.89	19.25	13.55	12.67	12.41	2.68	6.30	12.99	4.94	12.24	12.05	3.74	32.79	26.45	32.60	2.59	0.00	4.27
81	ER10a	ExonRegion	0	63.41	59.41	147.23	111.30	55.09	107.64	75.66	105.16	75.93	135.51	120.54	50.23	74.61	123.09	175.53	141.81	115.27	225.95	80.90	122.77	62.49	44.55	46.72
82	E10_Da	KnownBoundary	0	28.60	51.64	84.36	114.74	115.62	90.80	98.66	111.27	76.56	102.26	66.91	24.16	47.72	47.91	80.35	38.45	48.43	83.98	44.33	88.40	3.15	24.43	26.29
83	ER10b	ExonRegion	0	28.51	47.22	68.41	78.37	65.07	59.95	68.20	52.90	51.46	74.39	45.58	31.21	39.40	44.22	51.95	42.50	39.07	53.40	50.89	85.15	8.78	26.03	18.38
84	ER10c	ExonRegion	0	3.81	10.98	2.70	6.27	12.84	4.03	8.21	3.46	3.21	0.69	3.87	4.33	2.81	4.87	4.06	2.97	5.94	2.59	3.82	7.23	0.00	2.08	0.00
85	IG36	Intergenic	0	22.56	22.51	26.50	27.31	33.34	17.14	54.71	21.33	17.20	34.61	22.19	27.79	25.83	28.80	21.03	28.02	20.84	46.02	45.71	48.50	17.34	16.06	20.23
86	IG36_AR2	ActiveIntergenicRegion	0	21.67	11.17	19.78	21.46	25.21	14.52	36.19	16.51	10.96	17.98	11.84	20.85	42.21	27.86	20.23	18.75	25.80	25.14	48.00	40.10	15.98	20.10	13.28
87	IG36_SR1	SilentIntergenicRegion	0	22.17	22.44	31.53	35.84	29.55	19.17	58.05	30.59	19.81	43.34	24.13	22.90	31.33	35.58	24.80	30.33	24.43	58.64	49.34	55.94	21.75	17.70	24.82
88	IG36_AR1	ActiveIntergenicRegion	0	23.12	25.06	24.93	23.40	37.57	16.54	56.83	16.72	16.99	32.89	23.28	32.44	19.15	24.95	18.99	28.70	17.69	42.84	43.25	45.94	14.98	14.28	18.95