Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC096772.4 Gene 0 55.34 134.86 103.90 113.67 91.48 154.44 74.38 71.72 93.95 64.86 17.26 10.79 17.50 13.08 17.19 8.17 13.61 29.75 28.58 42.04 12.47 35.45 11.99 2 343987 Transcript 0 37.03 88.92 67.81 74.42 59.96 99.78 48.13 47.04 61.47 42.98 11.17 6.98 11.17 8.47 11.34 5.24 8.60 18.90 18.23 27.21 7.81 23.51 7.68 3 IG8 Intergenic 0 12.89 64.33 29.23 46.67 38.26 94.84 49.83 42.75 78.97 54.48 17.50 12.76 33.55 16.01 8.85 13.53 22.78 62.42 39.17 55.82 25.12 32.82 22.71 4 IG8_SR5 SilentIntergenicRegion 0 7.56 34.94 13.58 21.47 23.42 56.89 39.72 31.56 67.72 34.05 10.13 9.17 21.61 17.17 4.15 10.39 16.03 53.04 32.46 48.58 18.99 25.69 24.55 5 IG8_AR6 ActiveIntergenicRegion 0 7.15 41.54 11.22 23.31 27.15 59.82 42.32 27.33 72.20 51.55 13.78 14.12 37.79 15.60 7.06 7.38 19.17 33.53 34.29 45.75 12.97 31.55 17.76 6 IG8_SR4 SilentIntergenicRegion 0 1.59 12.03 3.37 5.68 9.81 12.23 10.98 2.88 8.03 6.74 3.46 1.98 14.85 0.00 1.45 0.00 4.13 4.00 12.21 4.26 0.00 8.16 1.10 7 IG8_AR5 ActiveIntergenicRegion 0 13.41 72.81 28.26 49.45 35.36 97.05 54.77 51.96 94.53 67.29 23.48 20.41 54.90 18.27 9.27 16.18 29.94 78.24 48.91 70.68 31.63 42.96 27.59 8 IG8_SR3 SilentIntergenicRegion 0 7.21 169.00 40.18 58.17 44.80 126.84 46.99 41.48 71.51 61.47 12.75 21.46 26.84 13.86 7.53 11.51 30.62 55.08 27.04 57.63 21.71 29.75 8.87 9 IG8_AR4 ActiveIntergenicRegion 0 11.35 174.33 26.40 57.12 40.87 71.18 44.29 39.91 60.18 51.82 11.77 21.65 49.03 13.73 10.29 11.62 16.50 62.15 30.70 43.33 18.43 33.53 5.87 10 IG8_AR3 ActiveIntergenicRegion 0 10.31 72.15 36.58 57.20 45.45 112.01 49.45 42.69 72.19 53.58 13.95 6.24 16.09 16.91 9.29 13.83 16.25 62.15 34.98 50.38 24.80 27.83 17.95 11 IG8_SR2 SilentIntergenicRegion 0 14.37 72.27 51.32 88.95 55.37 105.48 53.54 58.97 84.18 74.70 23.12 5.25 22.10 14.80 12.50 18.23 15.62 39.66 47.66 53.93 21.44 40.83 29.87 12 IG8_AR2 ActiveIntergenicRegion 0 16.04 62.07 41.26 62.47 57.59 121.59 50.02 44.53 73.07 54.62 19.97 9.54 22.96 11.59 13.28 15.50 23.47 64.29 32.03 51.18 21.62 28.38 21.85 13 IG8_SR1 SilentIntergenicRegion 0 2.51 32.28 10.80 18.06 23.25 78.62 40.55 13.29 18.84 10.68 9.79 3.25 0.59 6.09 1.45 2.60 7.22 23.10 10.95 15.82 7.99 7.94 9.73 14 IG8_AR1 ActiveIntergenicRegion 0 27.02 69.80 42.84 51.10 45.02 109.82 54.30 33.74 63.34 36.36 11.54 1.69 7.88 10.29 10.01 10.32 19.67 41.09 32.31 33.34 25.52 18.33 16.67 15 ER1a ExonRegion 0 53.26 150.64 127.22 135.49 107.98 205.35 97.68 84.18 112.67 68.96 22.74 14.11 25.44 17.00 19.02 11.51 21.14 44.76 41.73 55.12 20.51 37.38 17.05 16 E1_Da NovelBoundary 0 123.73 159.64 125.51 120.06 80.98 164.34 98.97 81.45 86.02 63.37 28.90 6.30 19.80 10.36 10.26 69.04 59.93 35.07 34.54 50.49 42.63 27.92 59.16 17 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I1 Intron 0 35.69 80.26 28.34 45.03 62.89 113.04 73.98 29.70 32.65 31.09 10.29 5.08 12.36 15.11 14.61 6.59 11.71 18.35 21.19 25.48 8.80 15.71 15.63 19 I1_AR1 ActiveIntronRegion 0 35.69 80.26 28.34 45.03 62.89 113.04 73.98 29.70 32.65 31.09 10.29 5.08 12.36 15.11 14.61 6.59 11.71 18.35 21.19 25.48 8.80 15.71 15.63 20 E2_Aa NovelBoundary 0 25.41 88.67 51.27 76.48 69.02 79.78 66.64 62.84 58.59 68.50 7.11 0.00 6.49 4.77 23.12 0.00 11.97 26.94 27.48 20.13 6.30 8.51 10.16 21 ER2a ExonRegion 0 57.82 116.11 76.22 87.76 71.89 93.99 46.71 56.93 71.73 59.98 10.76 6.84 8.09 8.42 15.01 4.20 4.67 11.94 12.96 26.51 2.92 33.14 5.99 22 IG7_SR1 SilentIntergenicRegion 0 0.28 1.44 0.89 1.91 1.30 31.33 3.47 0.61 1.52 1.03 0.16 0.12 0.19 0.18 0.10 0.05 0.00 0.42 0.64 0.43 0.15 0.14 0.10