Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC007970.2 Gene 0 2.40 6.79 5.93 3.92 5.40 7.24 12.23 3.39 3.27 1.99 5.32 3.74 10.84 6.04 1.80 2.36 18.48 2.78 3.02 6.71 1.01 0.83 0.90 2 433296 Transcript 0 1.54 4.43 4.67 3.55 4.20 6.00 7.17 2.48 2.25 1.27 1.31 0.89 3.36 1.17 0.56 0.27 4.59 1.17 2.40 2.09 0.37 0.26 0.69 3 420418 Transcript 0 1.37 2.63 0.89 0.97 3.46 4.59 6.80 0.85 3.10 2.06 7.91 5.06 10.85 11.97 2.62 4.79 22.98 3.41 2.64 7.05 1.42 1.68 0.95 4 416344 Transcript 0 0.98 4.70 5.35 1.68 1.73 1.35 8.44 3.33 1.02 0.63 3.04 1.72 7.09 0.58 1.12 0.82 15.89 1.27 1.02 3.49 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 360.36 213.38 382.60 486.55 163.75 100.06 135.93 350.77 337.70 288.85 58.54 88.23 27.43 17.01 9.89 97.58 119.59 112.84 46.78 146.75 34.90 30.00 46.69 10 ER2a ExonRegion 0 7.99 17.87 23.47 13.65 21.04 21.29 25.48 14.16 13.38 6.53 2.26 1.04 3.43 2.71 0.60 0.87 18.35 4.49 4.66 8.69 0.00 1.21 1.73 11 E2_Da NovelBoundary 0 14.45 28.22 72.94 65.99 30.05 66.33 64.83 42.27 33.85 24.34 5.37 6.30 6.82 0.00 0.00 3.59 13.93 15.21 21.46 3.00 0.00 0.00 4.01 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.25 0.00 0.00 0.00 0.00 0.00 0.00 14 E3_Aa NovelBoundary 0 93.28 202.20 785.48 393.72 190.83 173.93 256.89 326.83 258.91 261.34 27.01 53.72 63.47 22.13 41.78 110.06 59.00 324.79 121.79 132.12 65.85 46.29 47.29 15 ER3a ExonRegion 0 3.69 15.13 13.31 13.11 11.75 26.14 27.51 5.65 4.02 3.66 5.83 3.41 10.73 4.65 3.91 1.28 8.45 3.66 13.85 4.71 0.95 0.88 3.78 16 E3_Da NovelBoundary 0 3.11 20.85 31.99 32.30 27.50 47.08 43.01 29.90 8.80 12.20 10.06 0.00 6.82 11.60 0.00 0.00 8.79 17.16 13.37 15.28 0.00 0.00 3.59 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I3 Intron 0 7.18 16.15 17.25 30.39 18.92 34.01 34.37 17.22 14.26 8.36 5.34 2.23 4.54 3.75 2.39 1.01 6.24 8.02 6.79 10.82 0.32 1.31 0.85 19 I3_SR1 SilentIntronRegion 0 9.22 16.82 22.98 38.50 24.95 38.67 35.98 18.83 16.14 10.93 6.70 1.68 3.23 3.35 2.80 1.35 6.80 9.92 7.39 11.58 0.60 1.89 0.69 20 I3_AR1 ActiveIntronRegion 0 6.79 16.57 11.63 23.01 14.57 31.11 37.03 16.89 12.87 7.40 4.20 3.63 4.71 5.08 2.11 1.09 4.58 7.82 7.88 11.94 0.00 0.10 1.30 21 I3_AR2 ActiveIntronRegion 0 2.37 14.19 9.65 18.93 8.90 25.90 27.13 13.59 11.20 2.92 3.30 1.93 7.90 3.06 1.69 0.00 6.97 3.37 3.89 7.46 0.00 1.37 0.72 22 E4_Aa NovelBoundary 0 10.22 44.07 11.32 16.68 51.87 60.08 30.30 16.76 9.64 5.86 4.69 6.60 0.00 4.94 0.00 0.00 0.00 6.47 9.13 6.01 0.00 3.00 0.00 23 ER4a ExonRegion 0 4.96 14.07 4.41 2.49 6.03 16.27 20.39 1.49 0.00 1.03 1.38 2.64 7.98 3.60 0.03 1.78 13.58 0.00 7.29 11.03 0.00 0.02 1.72 24 E4_Da NovelBoundary 0 6.74 2.70 5.41 31.06 16.72 34.64 21.55 19.14 18.89 11.74 2.21 0.00 0.00 0.00 0.00 4.36 0.00 6.09 4.80 0.00 0.00 0.00 0.00 25 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.83 0.00 0.00 0.00 0.00 0.00 0.00 26 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 27 I4 Intron 0 2.37 11.62 4.71 12.18 13.50 21.99 21.22 11.84 11.86 6.99 3.90 3.85 6.37 2.75 0.99 2.17 7.95 6.09 3.57 7.04 0.49 0.47 0.99 28 I4_AR1 ActiveIntronRegion 0 2.03 13.85 6.90 16.60 16.88 26.27 27.24 15.16 13.12 8.26 5.46 6.78 7.86 3.79 1.39 3.47 12.33 9.64 4.83 8.99 0.51 0.73 0.76 29 I4_SR1 SilentIntronRegion 0 3.11 10.59 3.11 9.38 11.69 20.21 17.99 10.16 12.40 6.75 2.85 1.34 5.79 1.44 0.73 1.11 4.54 2.79 2.79 5.01 0.55 0.26 1.39 30 Ix Intron 0 11.40 13.63 17.45 10.72 9.41 3.83 12.08 15.85 8.70 6.20 11.68 3.14 12.43 5.09 6.66 2.61 13.79 6.17 6.65 6.78 0.97 0.92 0.65 31 Ix_AR1 ActiveIntronRegion 0 15.62 17.14 15.91 12.16 10.18 5.33 15.35 15.91 11.29 6.71 12.51 5.56 12.00 5.35 10.37 2.90 15.32 6.24 6.84 5.88 0.47 1.66 1.25 32 Ix_SR1 SilentIntronRegion 0 6.94 9.97 19.27 9.25 8.67 2.24 8.65 15.93 5.98 5.70 10.89 0.55 12.99 4.87 2.71 2.33 12.25 6.16 6.50 7.82 1.52 0.12 0.00 33 Ix Intron 0 11.71 25.31 7.43 9.75 22.20 30.28 35.75 16.34 13.77 12.37 32.86 15.60 35.60 35.59 10.26 11.85 38.13 19.95 9.59 21.11 2.69 6.61 6.45 34 Ix_AR1 ActiveIntronRegion 0 13.95 27.80 8.71 11.12 24.48 33.42 44.60 19.74 15.01 15.35 39.00 16.12 40.02 42.14 11.14 11.73 44.44 23.72 9.83 24.60 2.52 7.56 6.02 35 E5_Aa NovelBoundary 0 14.82 50.19 4.02 12.05 31.41 22.83 28.44 15.16 26.39 24.07 46.80 45.31 40.91 57.45 13.35 23.58 115.85 22.38 9.60 38.29 2.47 16.78 10.93 36 ER5a ExonRegion 0 5.47 10.50 3.55 3.90 13.85 18.37 27.20 3.38 11.14 8.24 31.64 20.25 43.40 47.87 10.48 19.17 74.60 13.62 5.77 28.18 5.66 6.73 3.79 37 E5_Da NovelBoundary 0 3.78 11.97 8.63 18.58 11.97 37.02 43.28 19.51 27.81 10.56 52.80 38.11 45.45 97.12 8.90 12.13 63.39 38.63 13.46 50.24 11.31 14.27 33.21 38 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.46 0.00 4.80 0.00 0.00 0.00 0.00 39 Ix Intron 0 3.32 5.98 3.52 5.15 6.49 12.83 25.22 7.57 9.48 7.50 32.40 28.63 97.57 38.59 5.51 12.24 45.60 8.27 6.06 26.43 2.44 7.81 5.07 40 Ix_SR1 SilentIntronRegion 0 4.59 11.14 4.17 6.26 13.74 17.99 29.00 11.76 14.49 10.53 29.77 28.08 82.31 42.73 10.59 13.22 36.93 13.95 11.99 18.21 2.77 6.89 5.36 41 Ix_AR1 ActiveIntronRegion 0 4.16 8.46 5.11 6.49 9.89 22.22 31.25 10.98 14.15 13.08 43.63 35.31 128.59 44.87 5.32 15.84 53.32 10.70 6.47 30.88 2.35 11.10 6.26 42 Ix_SR2 SilentIntronRegion 0 2.53 3.33 2.35 4.05 2.84 5.60 20.52 4.51 5.42 3.22 25.51 24.35 80.11 33.68 4.66 9.68 42.25 5.56 4.66 25.11 2.44 5.81 4.23 43 E6_Aa NovelBoundary 0 3.63 0.00 0.00 4.00 0.00 5.79 0.00 0.00 0.00 0.00 0.00 17.26 26.78 3.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 44 ER6a ExonRegion 0 0.00 0.00 0.20 2.79 0.00 0.00 0.98 0.00 1.38 0.02 1.48 2.64 3.13 1.39 0.04 0.00 17.13 0.48 2.35 4.26 0.06 0.00 0.00 45 E6_Da KnownBoundary 0 0.00 0.00 0.00 5.79 0.00 0.00 0.00 0.00 1.42 0.00 4.47 0.00 12.99 0.00 0.00 0.00 4.49 0.00 4.80 9.46 0.00 0.00 0.00 46 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.07 0.00 0.00 0.00 0.00 0.00 0.00 47 ER6b ExonRegion 0 0.64 2.45 0.55 1.62 0.81 0.55 4.38 0.00 0.62 0.00 2.37 2.68 12.76 2.00 0.00 0.00 5.17 1.21 0.69 3.33 1.99 0.00 0.00 48 E6_Db NovelBoundary 0 0.00 0.00 0.00 1.80 0.00 0.00 2.25 0.00 0.00 0.00 0.00 6.00 8.28 9.71 0.00 0.00 4.77 2.28 3.58 5.88 0.00 3.00 0.00 49 ER7a ExonRegion 0 1.35 1.30 0.98 1.14 0.00 0.00 5.06 0.00 0.00 0.00 1.11 2.27 2.46 0.91 1.52 0.00 20.22 1.48 0.60 3.94 0.00 0.00 0.00 50 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.53 0.00 4.33 0.00 0.00 0.00 0.00 51 ER8a ExonRegion 0 0.00 0.00 2.07 0.31 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.01 0.00 23.11 0.00 3.19 1.96 0.00 0.00 0.00 52 ER8b ExonRegion 0 0.98 4.70 5.35 1.68 1.73 1.35 8.44 3.33 1.02 0.63 3.04 1.72 7.09 0.58 1.12 0.82 15.89 1.27 1.02 3.49 0.00 0.00 0.00