Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALS2CR10 Gene 0 15.04 0.70 1.34 3.58 8.78 3.23 7.72 4.16 5.95 0.84 2.18 7.69 18.50 3.77 13.64 9.61 15.52 1.08 0.00 1.56 3.56 5.41 15.40 2 415011 Transcript 0 5.94 0.18 0.49 1.31 3.13 1.66 3.04 1.64 1.81 0.47 0.80 2.18 6.15 1.61 4.77 3.93 5.53 0.48 0.00 0.68 1.13 2.14 5.88 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.36 0.00 0.00 0.07 0.14 0.00 0.00 0.00 0.00 0.25 0.09 3.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.23 4 E1_Da NovelBoundary 0 35.56 8.88 3.46 6.63 16.13 2.10 19.78 6.90 13.83 6.55 12.00 6.30 13.64 7.00 44.75 7.95 20.57 5.51 0.00 6.07 10.69 14.08 35.17 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 35.62 0.58 1.68 4.10 16.31 4.68 11.97 7.12 11.02 3.03 4.11 17.35 30.23 6.49 22.35 11.38 15.44 1.37 0.68 2.34 3.43 7.09 21.43 7 Ix_AR1 ActiveIntronRegion 0 18.22 0.00 1.21 0.00 5.32 0.00 7.02 0.00 0.00 0.00 3.84 9.45 7.67 7.34 10.85 13.74 15.26 0.00 6.33 2.82 0.00 5.57 13.62 8 Ix_SR1 SilentIntronRegion 0 36.63 0.61 1.71 4.34 16.95 4.95 12.25 7.53 11.66 3.20 4.13 17.81 31.52 6.45 23.02 11.25 15.46 1.45 0.36 2.31 3.63 7.18 21.89 9 E2_Aa NovelBoundary 0 40.67 0.00 2.48 9.09 18.59 0.00 10.78 6.00 8.04 1.18 0.00 38.26 35.39 2.47 18.54 12.22 22.35 2.32 0.00 0.00 5.37 8.82 8.71 10 ER2a ExonRegion 0 22.04 1.71 2.05 6.24 14.66 2.58 10.97 6.14 12.67 0.72 3.53 17.57 35.94 6.05 24.39 11.71 27.83 1.16 0.00 1.49 7.12 7.61 24.74 11 E2_Da NovelBoundary 0 28.08 0.00 0.00 9.62 11.46 2.73 24.11 9.24 27.57 3.71 7.58 17.86 19.64 9.65 18.54 44.01 30.11 1.66 0.00 0.00 9.14 5.76 39.35 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 17.05 1.07 3.33 5.34 9.75 3.15 7.61 9.37 9.93 2.22 1.76 11.29 18.07 4.70 19.13 11.97 17.23 2.19 0.00 2.24 4.01 7.37 16.77 14 Ix_AR4 ActiveIntronRegion 0 16.22 1.79 1.68 8.66 16.57 0.44 5.85 7.92 17.42 2.86 2.38 6.91 27.04 4.81 26.74 13.49 28.35 2.35 0.00 1.75 8.10 9.31 24.04 15 Ix_AR3 ActiveIntronRegion 0 17.57 6.10 3.68 11.52 19.67 6.69 9.14 12.10 25.88 6.25 1.74 20.13 5.63 10.31 23.21 23.33 35.48 5.54 0.00 0.00 5.95 9.06 28.49 16 Ix_AR2 ActiveIntronRegion 0 17.14 4.47 2.70 8.59 19.80 7.34 13.50 10.37 21.49 6.88 1.93 24.25 2.81 11.37 18.57 27.34 21.46 2.59 0.00 0.00 6.83 1.25 25.84 17 Ix_SR2 SilentIntronRegion 0 17.63 0.73 3.98 4.99 8.66 3.81 8.68 10.37 9.25 1.92 2.30 7.42 14.56 5.29 21.26 14.28 20.44 3.18 0.00 2.49 5.44 7.43 21.08 18 Ix_AR1 ActiveIntronRegion 0 17.87 0.91 2.78 3.96 10.78 2.97 7.28 9.79 9.08 2.32 0.66 19.79 25.91 1.91 12.54 5.08 3.93 0.31 0.00 1.80 0.00 7.66 6.46 19 Ix_SR1 SilentIntronRegion 0 13.28 1.50 2.27 5.99 6.00 1.39 3.50 4.33 6.17 2.11 0.60 16.50 17.90 5.52 14.56 9.17 14.35 0.00 0.00 2.65 0.69 5.37 6.16 20 E3_Aa NovelBoundary 0 14.08 0.00 0.00 3.56 3.90 2.84 12.54 8.30 9.23 2.69 0.00 19.51 21.26 9.30 24.72 8.46 12.16 0.00 0.00 2.81 2.72 2.94 16.48 21 ER3a ExonRegion 0 9.18 0.64 2.30 3.20 10.92 2.89 9.54 4.05 4.61 1.51 1.83 5.69 14.45 4.40 20.58 16.81 16.63 0.00 0.00 3.27 3.47 4.59 13.87 22 E3_Da NovelBoundary 0 13.34 0.00 1.24 0.00 3.65 2.27 4.24 9.98 10.39 0.00 7.74 6.30 13.15 10.36 17.06 15.98 33.19 0.00 0.00 10.48 6.30 5.69 24.50 23 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 Ix Intron 0 21.68 0.00 1.25 2.31 10.94 2.09 9.95 4.11 7.12 1.17 2.64 13.05 11.62 3.26 16.24 16.24 12.78 0.63 0.00 3.39 4.01 2.37 18.72 25 Ix_SR1 SilentIntronRegion 0 21.78 0.00 1.25 2.32 10.98 2.10 9.99 4.12 7.15 1.17 2.65 13.10 11.67 3.28 16.31 16.31 12.83 0.63 0.00 3.41 4.03 2.38 18.81 26 E4_Aa NovelBoundary 0 302.94 23.35 43.05 41.59 100.34 154.74 90.84 53.27 105.06 44.03 119.08 280.29 336.67 134.62 120.40 170.72 188.41 21.80 19.01 10.16 84.39 228.28 186.86 27 ER4a ExonRegion 0 3.15 0.00 0.00 1.94 1.33 3.50 3.23 1.23 0.03 0.16 0.00 0.00 1.84 1.05 1.08 2.83 4.78 0.00 0.00 0.12 0.00 0.99 8.40 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5_Aa NovelBoundary 0 0.00 0.00 1.39 6.63 0.00 0.00 6.49 0.00 1.79 1.56 2.32 12.60 0.00 2.47 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 12.46 30 ER5a ExonRegion 0 1.42 0.00 0.00 0.00 0.00 2.46 0.00 0.41 0.08 0.00 0.00 0.00 2.59 0.88 0.00 0.04 4.34 0.05 0.00 0.08 0.00 0.03 2.16 31 E5_Da NovelBoundary 0 0.00 0.00 1.74 1.33 6.45 4.77 11.97 0.00 3.47 1.56 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.39 15.71 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 Ix Intron 0 21.86 0.00 0.00 0.00 1.73 3.55 6.84 0.00 0.00 0.00 1.25 4.27 4.99 5.37 6.61 7.67 8.52 0.00 0.00 0.00 1.42 2.69 5.69 34 Ix_SR1 SilentIntronRegion 0 22.43 0.00 0.00 0.00 1.77 3.64 7.00 0.00 0.00 0.00 1.28 4.39 5.06 5.51 6.78 7.87 8.75 0.00 0.00 0.00 1.46 2.76 5.84 35 E6_Aa NovelBoundary 0 21.71 0.00 3.37 20.04 11.12 15.90 26.01 8.17 12.50 1.67 5.37 19.66 13.47 4.89 4.45 7.52 22.63 4.52 0.00 9.46 0.00 13.53 14.77 36 ER6a ExonRegion 0 41.44 0.00 2.02 5.22 13.84 10.17 15.66 9.29 6.08 2.53 5.00 5.08 23.59 6.05 12.87 19.75 18.30 5.06 0.00 3.89 4.07 14.61 27.03 37 E6_Da NovelBoundary 0 24.97 0.00 1.83 12.42 11.54 26.58 40.01 6.45 9.55 6.53 5.37 38.71 20.13 4.59 8.90 22.47 39.64 0.00 0.00 3.26 2.41 25.90 15.37 38 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 Ix Intron 0 30.67 2.46 3.14 7.23 15.88 7.50 13.57 6.11 8.55 2.68 3.46 12.55 29.54 4.66 16.13 12.61 15.00 1.30 0.40 3.01 3.34 11.31 18.54 40 Ix_SR2 SilentIntronRegion 0 29.48 3.23 3.21 5.81 11.72 6.13 11.64 4.44 7.24 2.53 2.07 11.68 24.38 4.84 11.50 11.38 13.32 1.05 0.22 2.13 3.42 8.05 16.51 41 Ix_AR1 ActiveIntronRegion 0 36.41 0.41 2.97 11.73 29.05 11.93 19.98 11.28 12.92 3.20 7.80 16.02 46.30 4.46 30.19 16.71 20.96 2.14 0.97 5.62 3.25 21.33 24.83 42 Ix Intron 0 44.51 0.49 0.00 7.36 9.05 3.55 7.68 0.62 6.23 0.41 1.40 14.84 21.01 8.54 29.29 19.40 7.98 0.00 0.77 1.54 0.53 9.06 19.87 43 Ix_AR1 ActiveIntronRegion 0 44.69 0.49 0.00 7.40 9.10 3.56 7.72 0.62 6.26 0.42 1.41 14.91 21.11 8.58 29.43 19.49 8.02 0.00 0.77 1.55 0.54 9.10 19.97 44 Ix Intron 0 34.90 1.30 3.27 4.15 7.87 7.03 11.00 4.28 6.82 1.53 4.20 20.38 62.20 8.95 27.31 13.30 24.90 1.53 0.41 2.45 3.38 12.25 18.02 45 Ix_SR2 SilentIntronRegion 0 22.46 0.00 1.25 3.48 7.33 6.28 8.16 4.41 5.04 0.58 2.65 21.10 31.35 7.19 21.91 13.22 15.84 3.46 1.09 2.91 3.77 7.84 18.09 46 Ix_SR1 SilentIntronRegion 0 42.48 2.08 4.49 4.58 8.22 7.51 12.75 4.22 7.92 2.10 5.15 20.03 80.92 10.03 30.66 13.39 30.42 0.38 0.00 2.18 3.16 14.94 18.04 47 Ix Intron 0 22.58 0.88 2.83 3.15 15.43 6.49 13.47 4.00 4.11 0.95 2.28 14.74 37.14 6.43 13.71 12.72 21.09 0.63 0.40 1.32 3.14 8.53 15.48 48 Ix_SR3 SilentIntronRegion 0 26.78 1.10 2.96 3.13 19.19 7.92 15.93 4.77 4.97 1.05 2.54 16.62 43.68 7.33 15.60 14.22 25.47 0.78 0.49 1.47 3.57 9.00 17.45 49 Ix Intron 0 29.43 2.80 0.63 5.95 17.97 4.09 15.00 8.41 6.66 4.72 3.02 22.05 43.75 7.53 19.91 6.14 9.66 0.63 1.09 1.46 2.26 15.00 14.63 50 Ix_AR1 ActiveIntronRegion 0 29.52 2.81 0.63 5.97 18.03 4.11 15.05 8.44 6.69 4.73 3.03 22.13 43.90 7.55 19.98 6.16 9.69 0.63 1.09 1.46 2.27 15.05 14.67 51 Ix Intron 0 17.49 1.16 1.56 0.58 18.31 12.55 8.68 5.14 4.72 0.00 22.03 24.60 35.37 21.61 43.76 18.61 16.93 0.00 0.91 0.61 1.26 14.25 14.21 52 Ix_AR1 ActiveIntronRegion 0 8.90 0.00 3.06 0.48 14.95 6.96 6.66 8.54 8.50 0.00 24.50 7.77 20.14 17.39 48.47 29.37 20.58 0.00 2.34 0.00 0.97 18.51 20.56 53 Ix_SR1 SilentIntronRegion 0 19.50 1.43 1.21 0.60 19.10 13.86 9.15 4.34 3.83 0.00 21.45 28.54 38.94 22.60 42.66 16.09 16.07 0.00 0.57 0.75 1.32 13.25 12.72 54 E7_Aa NovelBoundary 0 18.67 0.00 11.92 1.53 24.02 18.28 3.89 6.16 17.74 6.29 36.11 54.62 89.44 17.19 76.02 33.07 31.70 0.00 0.00 0.00 0.00 8.02 16.99 55 ER7a ExonRegion 0 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00