Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLEKHM3 Gene 0 6.14 16.58 14.81 16.38 11.49 27.37 21.30 17.98 36.11 25.39 11.89 10.56 9.35 12.49 7.46 13.76 17.19 49.76 25.38 35.96 16.96 13.96 14.22 2 323852 Transcript 0 0.00 3.60 1.23 0.16 0.00 2.05 3.11 3.06 0.00 0.00 1.04 0.00 0.00 1.31 0.00 0.00 2.41 0.36 6.37 0.00 0.00 0.00 0.00 3 389247 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 427836 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 457206 Transcript 0 0.44 0.20 1.10 0.80 0.50 0.19 1.10 0.85 0.76 0.41 0.14 1.44 0.35 0.18 0.27 0.23 0.48 0.69 0.41 0.48 0.41 0.10 0.17 6 408943 Transcript 0 1.67 13.72 14.56 7.49 4.59 23.76 15.16 11.92 26.95 22.41 9.03 3.88 11.76 5.36 9.05 14.33 11.33 31.85 32.42 21.72 13.88 10.11 12.49 7 447645 Transcript 0 3.17 3.09 0.37 2.76 3.57 4.35 3.75 1.31 1.63 0.35 0.26 1.99 5.95 2.85 5.66 3.34 2.13 1.69 1.95 3.18 0.37 1.06 1.90 8 ER1a ExonRegion 0 3.59 8.17 2.53 3.29 3.74 9.40 9.60 2.39 6.96 4.42 4.82 0.00 0.00 0.67 2.58 12.88 3.88 28.80 16.74 7.50 5.28 2.74 10.77 9 E1_Ab KnownBoundary 0 6.59 30.26 8.07 13.78 3.82 39.58 34.31 12.86 21.18 15.12 10.32 0.00 0.00 2.12 0.00 57.25 16.08 109.64 96.76 31.58 22.61 13.41 50.36 10 ER1b ExonRegion 0 6.49 14.72 12.19 12.74 5.92 16.91 13.12 11.39 27.25 17.21 8.14 4.53 0.00 5.33 3.30 14.81 6.39 57.77 50.59 18.43 15.08 8.16 20.45 11 E1a_E2a KnownJunction 0 7.04 3.35 9.28 2.90 4.33 2.56 1.85 8.87 13.63 12.33 27.64 0.00 0.00 5.47 0.00 0.00 8.60 11.36 4.80 12.02 16.25 0.00 4.35 12 ER2a ExonRegion 0 2.62 6.56 16.05 20.19 5.62 16.32 10.51 31.65 46.36 27.50 22.82 10.46 7.63 13.63 10.26 31.38 18.45 89.35 68.12 41.38 23.27 22.43 27.60 13 E2_Ab KnownBoundary 0 3.19 6.58 15.11 12.85 7.98 68.71 49.64 31.63 63.71 35.83 14.37 11.85 13.96 25.72 5.56 4.27 30.01 37.47 22.02 25.95 24.96 14.14 22.96 14 ER2b ExonRegion 0 8.72 29.34 20.11 20.49 18.99 43.63 34.08 28.48 67.61 44.17 22.28 18.81 19.15 21.08 7.88 25.14 28.88 79.80 34.45 62.28 27.38 25.40 25.34 15 E2a_E3a KnownJunction 0 2.96 28.74 15.58 22.54 22.41 65.13 38.64 44.48 71.32 37.12 26.74 31.36 33.93 12.24 0.00 19.48 53.86 74.20 26.54 63.02 16.19 25.11 19.97 16 E2a_E4a NovelJunction 0 0.00 0.00 2.78 0.00 0.00 0.00 4.11 0.00 1.48 1.18 0.00 0.00 0.00 0.00 0.00 4.19 0.00 2.16 0.00 3.26 3.15 8.08 0.00 17 ER3a ExonRegion 0 5.73 19.15 27.52 25.99 19.39 59.10 40.13 28.45 56.22 60.56 28.44 28.57 14.82 27.40 8.92 18.94 37.64 87.82 29.83 63.35 26.33 18.89 25.51 18 E3_Ab KnownBoundary 0 19.48 10.98 26.23 27.34 51.61 64.96 40.36 38.61 66.96 63.45 13.06 51.77 21.26 9.42 4.45 25.55 53.39 86.39 25.32 61.74 29.65 23.21 36.02 19 ER3b ExonRegion 0 9.63 34.28 30.83 34.83 22.10 47.80 36.39 31.03 60.82 46.67 22.99 16.21 12.05 21.33 11.39 23.66 30.63 93.66 40.87 70.50 31.85 22.90 25.03 20 E3_Da NovelBoundary 0 0.00 9.14 1.57 2.06 0.00 2.67 6.54 6.98 1.79 1.67 4.95 0.00 0.00 2.12 5.81 0.00 4.49 4.77 14.02 0.00 0.00 0.00 0.00 21 E3a_E4a KnownJunction 0 9.56 15.13 23.74 31.83 3.31 60.42 36.52 22.59 57.87 40.99 6.53 0.00 33.44 11.60 18.05 32.56 32.73 110.51 34.26 65.00 43.86 25.78 18.87 22 E3_Db NovelBoundary 0 11.19 0.00 16.91 13.72 0.00 0.00 15.19 14.05 6.45 4.62 2.68 6.30 0.00 2.47 8.90 0.00 0.00 15.96 14.40 5.88 3.03 3.12 8.19 23 ER3c ExonRegion 0 0.00 3.60 1.23 0.16 0.00 2.05 3.11 3.06 0.00 0.00 1.04 0.00 0.00 1.31 0.00 0.00 2.41 0.36 6.37 0.00 0.00 0.00 0.00 24 I3_SR1 SilentIntronRegion 0 12.80 5.60 8.83 6.80 9.63 1.98 5.94 8.00 5.34 3.39 0.60 0.05 3.65 0.30 1.61 2.49 1.28 1.07 1.48 1.81 0.00 0.12 0.45 25 ER4a ExonRegion 0 6.48 16.58 24.72 27.33 10.19 46.60 31.13 32.43 65.94 46.53 16.83 18.15 12.66 26.82 10.04 15.06 19.38 123.27 43.00 69.99 34.43 27.39 21.70 26 E4a_E5a KnownJunction 0 6.96 22.23 17.83 18.31 24.02 30.15 26.10 20.17 47.86 38.95 19.48 6.30 0.00 17.13 0.00 22.90 34.32 104.55 27.95 66.86 20.94 23.70 10.67 27 ER5a ExonRegion 0 4.20 24.60 16.70 17.57 11.90 43.13 24.64 14.74 45.11 33.70 14.72 14.97 10.83 13.77 9.60 13.31 26.29 59.72 30.06 47.44 32.62 25.50 12.91 28 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5a_E7a KnownJunction 0 10.45 34.60 14.34 13.72 7.81 34.36 31.53 22.80 51.56 41.15 19.27 0.00 5.84 21.72 4.45 17.17 29.73 113.08 35.30 37.97 42.44 44.58 18.69 30 ER6a ExonRegion 0 0.00 0.09 0.00 0.06 0.00 0.00 0.06 0.00 0.00 0.00 0.00 4.03 0.00 0.07 0.00 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER7a ExonRegion 0 6.61 41.08 12.77 17.87 7.23 49.03 36.53 21.12 53.88 34.68 7.46 9.00 17.00 20.15 7.21 14.12 24.34 85.95 47.13 51.16 22.45 18.46 15.51 33 E7_Da NovelBoundary 0 6.67 6.18 1.83 8.29 7.30 2.61 18.50 3.24 1.24 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 3.86 11.70 0.00 0.00 0.00 34 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E7a_E9a KnownJunction 0 3.63 34.47 16.50 21.68 7.39 57.47 29.32 26.08 53.47 30.41 4.79 17.56 12.82 21.90 4.94 8.20 34.60 62.39 22.12 60.34 8.65 8.76 4.35 36 I7_SR2 SilentIntronRegion 0 6.11 2.03 4.49 7.72 2.68 7.34 18.98 0.00 2.47 1.85 1.93 1.44 1.56 1.62 0.00 0.00 2.20 1.85 5.13 4.85 2.20 0.00 2.94 37 ER8a ExonRegion 0 2.22 0.90 5.51 3.92 2.48 0.96 5.43 4.25 3.78 2.07 0.70 3.16 1.74 0.84 1.36 1.08 2.39 3.44 2.05 2.40 2.04 0.50 0.83 38 I8_AR3 ActiveIntronRegion 0 4.23 13.07 6.13 6.81 8.03 1.83 18.91 10.37 7.41 3.44 0.00 0.00 4.69 0.00 0.00 5.94 3.30 3.70 0.00 1.82 0.00 0.00 0.00 39 I8_AR4 ActiveIntronRegion 0 2.12 4.65 6.13 2.14 11.09 1.31 24.40 10.37 3.62 2.29 0.00 4.33 0.00 0.00 0.00 5.94 0.00 3.70 0.00 2.13 1.10 0.00 2.94 40 ER9a ExonRegion 0 10.48 27.21 14.67 27.39 22.73 47.55 39.95 31.56 63.41 37.34 8.87 7.43 8.13 18.37 6.68 11.29 24.76 62.92 40.54 53.34 20.92 20.66 15.69 41 E9_Da NovelBoundary 0 0.00 8.49 10.17 24.94 22.92 0.00 25.31 21.11 8.59 6.82 2.47 0.00 0.00 2.12 8.90 0.00 0.00 2.28 13.46 15.34 0.00 2.69 0.00 42 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E9a_E12a KnownJunction 0 0.00 44.40 20.76 21.18 11.88 70.24 35.68 32.12 62.67 48.62 4.05 6.00 26.95 24.49 15.20 11.96 31.04 85.23 50.07 63.47 20.94 21.43 19.80 44 I9_AR2 ActiveIntronRegion 0 4.88 10.17 10.27 17.82 7.00 2.12 9.57 7.18 11.59 9.09 1.04 4.33 0.00 2.50 5.80 0.23 0.00 10.52 0.00 8.51 0.17 0.00 2.26 45 E10_Aa NovelBoundary 0 12.52 8.68 0.00 0.00 7.39 16.24 23.49 2.30 1.79 3.28 2.68 6.75 0.00 0.00 0.00 0.00 4.58 4.48 0.00 5.24 0.00 0.00 0.00 46 ER10a ExonRegion 0 0.00 3.80 0.00 0.12 5.35 1.71 1.21 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E10_Da NovelBoundary 0 7.56 16.97 0.00 7.03 4.24 2.21 6.23 2.22 4.92 1.26 7.42 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 3.12 0.00 48 E10_Db NovelBoundary 0 0.00 5.99 1.15 5.83 20.37 0.00 5.96 1.81 2.89 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 2.03 0.00 3.13 0.00 0.00 0.00 49 E10b_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER10b ExonRegion 0 0.00 4.07 0.00 0.00 3.06 1.83 1.51 0.00 0.00 0.00 0.00 0.00 8.71 1.62 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E11_Aa NovelBoundary 0 1599.91 700.53 462.49 483.26 989.64 509.37 888.02 462.78 451.50 381.71 120.08 85.68 117.36 48.62 131.41 458.43 317.44 254.03 319.82 359.09 161.61 189.52 287.25 52 ER11a ExonRegion 0 9.50 5.19 1.12 8.29 7.64 11.23 9.73 3.94 4.88 1.05 0.79 5.97 9.14 6.93 16.14 10.01 6.40 5.06 5.85 9.54 1.12 3.19 5.70 53 I11_AR1 ActiveIntronRegion 0 2.91 5.79 6.83 21.43 5.56 4.42 6.63 7.16 14.42 3.10 0.00 0.00 2.57 0.00 1.60 0.85 1.88 1.57 1.19 1.84 0.00 1.19 1.67 54 ER12a ExonRegion 0 6.66 23.75 20.57 17.27 15.06 59.71 33.52 31.47 62.95 45.88 16.25 11.27 16.49 20.49 8.17 10.80 29.96 58.89 48.85 46.90 24.37 26.05 17.15 55 E12_Da KnownBoundary 0 7.48 40.12 33.03 14.58 7.89 56.84 47.65 33.60 76.19 53.16 21.37 12.60 6.17 14.01 5.81 16.41 27.30 82.91 58.54 23.46 25.33 32.33 17.07 56 ER12b ExonRegion 0 1.67 13.72 14.56 7.49 4.59 23.76 15.16 11.92 26.95 22.41 9.03 3.88 11.76 5.36 9.05 14.33 11.33 31.85 32.42 21.72 13.88 10.11 12.49 57 IG8 Intergenic 0 12.89 64.33 29.23 46.67 38.26 94.84 49.83 42.75 78.97 54.48 17.50 12.76 33.55 16.01 8.85 13.53 22.78 62.42 39.17 55.82 25.12 32.82 22.71 58 IG8_SR5 SilentIntergenicRegion 0 7.56 34.94 13.58 21.47 23.42 56.89 39.72 31.56 67.72 34.05 10.13 9.17 21.61 17.17 4.15 10.39 16.03 53.04 32.46 48.58 18.99 25.69 24.55 59 IG8_AR6 ActiveIntergenicRegion 0 7.15 41.54 11.22 23.31 27.15 59.82 42.32 27.33 72.20 51.55 13.78 14.12 37.79 15.60 7.06 7.38 19.17 33.53 34.29 45.75 12.97 31.55 17.76 60 IG8_SR4 SilentIntergenicRegion 0 1.59 12.03 3.37 5.68 9.81 12.23 10.98 2.88 8.03 6.74 3.46 1.98 14.85 0.00 1.45 0.00 4.13 4.00 12.21 4.26 0.00 8.16 1.10 61 IG8_AR5 ActiveIntergenicRegion 0 13.41 72.81 28.26 49.45 35.36 97.05 54.77 51.96 94.53 67.29 23.48 20.41 54.90 18.27 9.27 16.18 29.94 78.24 48.91 70.68 31.63 42.96 27.59 62 IG8_SR3 SilentIntergenicRegion 0 7.21 169.00 40.18 58.17 44.80 126.84 46.99 41.48 71.51 61.47 12.75 21.46 26.84 13.86 7.53 11.51 30.62 55.08 27.04 57.63 21.71 29.75 8.87 63 IG8_AR4 ActiveIntergenicRegion 0 11.35 174.33 26.40 57.12 40.87 71.18 44.29 39.91 60.18 51.82 11.77 21.65 49.03 13.73 10.29 11.62 16.50 62.15 30.70 43.33 18.43 33.53 5.87 64 IG8_AR3 ActiveIntergenicRegion 0 10.31 72.15 36.58 57.20 45.45 112.01 49.45 42.69 72.19 53.58 13.95 6.24 16.09 16.91 9.29 13.83 16.25 62.15 34.98 50.38 24.80 27.83 17.95 65 IG8_SR2 SilentIntergenicRegion 0 14.37 72.27 51.32 88.95 55.37 105.48 53.54 58.97 84.18 74.70 23.12 5.25 22.10 14.80 12.50 18.23 15.62 39.66 47.66 53.93 21.44 40.83 29.87 66 IG8_AR2 ActiveIntergenicRegion 0 16.04 62.07 41.26 62.47 57.59 121.59 50.02 44.53 73.07 54.62 19.97 9.54 22.96 11.59 13.28 15.50 23.47 64.29 32.03 51.18 21.62 28.38 21.85 67 IG8_SR1 SilentIntergenicRegion 0 2.51 32.28 10.80 18.06 23.25 78.62 40.55 13.29 18.84 10.68 9.79 3.25 0.59 6.09 1.45 2.60 7.22 23.10 10.95 15.82 7.99 7.94 9.73 68 IG8_AR1 ActiveIntergenicRegion 0 27.02 69.80 42.84 51.10 45.02 109.82 54.30 33.74 63.34 36.36 11.54 1.69 7.88 10.29 10.01 10.32 19.67 41.09 32.31 33.34 25.52 18.33 16.67