Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C2orf47 Gene 0 34.05 33.93 57.50 46.59 44.99 51.46 44.77 39.83 23.60 47.10 115.65 76.67 40.76 124.27 132.37 68.18 71.05 23.30 25.33 33.57 25.48 43.67 21.13 2 295079 Transcript 0 0.00 1.14 1.09 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 3 392290 Transcript 0 11.33 3.35 13.26 4.89 0.94 2.48 2.57 7.93 1.24 4.59 2.62 9.42 2.48 7.07 11.61 0.00 0.00 0.00 0.75 1.00 0.00 1.10 0.00 4 435773 Transcript 0 0.12 0.04 0.01 0.52 0.00 0.62 0.68 0.00 0.05 0.35 0.00 0.19 0.03 0.29 0.00 0.00 0.00 0.00 0.02 0.08 0.00 0.00 1.50 5 469156 Transcript 0 14.11 12.10 32.03 15.67 19.62 22.31 15.71 16.35 10.22 12.80 37.91 13.03 8.10 50.54 39.17 27.65 20.86 9.24 8.20 13.11 12.49 14.31 8.82 6 ER1a ExonRegion 0 0.00 1.42 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.86 1.64 0.00 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 8 E2_Ab KnownBoundary 0 0.00 5.39 2.81 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 9 ER2b ExonRegion 0 4.36 5.24 2.51 0.79 3.20 9.97 6.87 1.06 0.42 1.85 13.87 0.00 0.90 12.81 21.28 14.52 13.02 4.53 4.95 3.02 4.93 4.19 4.15 10 E2_Ac KnownBoundary 1 66.68 38.15 24.81 9.86 41.68 109.94 88.77 12.90 12.76 14.05 148.77 0.00 0.00 167.87 174.79 155.94 122.77 75.45 62.59 36.18 63.94 53.09 60.18 11 ER2c ExonRegion 1 33.97 40.27 48.99 26.24 37.70 65.60 44.57 28.36 15.89 32.93 131.46 9.12 9.01 152.40 148.93 89.99 88.73 45.04 37.18 35.00 44.44 39.49 28.47 12 E2_Da NovelBoundary 0 13.63 0.00 7.04 0.00 7.13 5.00 0.00 4.68 1.65 2.42 2.58 0.00 0.00 2.35 4.45 7.52 8.98 6.26 8.66 3.26 9.02 5.94 0.00 13 E2a_E3b KnownJunction 0 91.35 60.06 134.89 71.29 87.10 151.39 76.75 70.61 41.29 69.44 202.79 66.62 28.41 315.50 308.67 145.69 103.88 39.34 16.75 78.49 81.42 71.46 42.68 14 I2_AR1 ActiveIntronRegion 0 21.52 1.69 2.96 4.32 0.00 6.22 5.65 1.59 2.01 2.02 4.86 1.75 0.00 7.83 8.35 3.51 1.89 5.58 0.00 1.84 2.97 2.74 1.22 15 ER3a ExonRegion 0 28.22 17.62 38.80 23.62 39.24 39.12 24.27 28.23 12.76 21.79 73.45 20.20 9.38 93.66 78.33 48.54 37.41 18.48 8.49 23.40 24.98 22.92 13.70 16 ER3b ExonRegion 0 73.12 55.05 126.44 102.60 106.88 86.99 63.62 83.94 46.27 75.97 225.80 88.17 60.90 244.51 247.55 156.02 130.41 66.60 31.81 59.99 59.78 71.60 34.37 17 E3a_E4a KnownJunction 0 101.57 97.94 170.25 136.55 121.73 102.04 87.44 99.89 53.62 108.93 252.01 211.72 98.53 283.66 355.89 247.20 137.91 96.17 65.13 96.71 64.56 106.06 49.34 18 ER4a ExonRegion 0 65.95 54.17 136.32 112.62 110.21 108.87 118.47 88.51 49.89 99.58 292.49 177.10 112.86 289.26 301.50 179.64 172.61 46.62 65.79 89.04 54.03 101.08 55.93 19 E4_Da NovelBoundary 1 2.82 8.68 8.75 12.92 3.65 0.00 11.88 0.00 3.01 1.37 0.00 37.21 0.00 2.24 0.00 8.29 8.23 2.11 4.14 5.82 0.00 0.00 11.61 20 E4a_E5a KnownJunction 0 44.16 84.79 92.96 105.18 93.04 99.77 152.85 70.81 48.90 68.63 250.38 155.00 153.56 201.43 270.60 124.24 170.83 31.71 56.66 68.58 30.64 69.99 44.99 21 E4a_E6a KnownJunction 0 0.00 6.58 25.25 7.72 0.00 5.51 7.15 4.48 7.67 3.81 2.37 5.85 6.82 7.42 0.00 6.75 4.30 0.00 7.91 2.81 0.00 5.69 3.93 22 E4a_E7a KnownJunction 0 0.00 0.00 0.00 1.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E5_Aa NovelBoundary 0 14.08 0.00 11.92 11.72 16.04 16.87 21.29 8.17 3.44 5.29 14.58 24.61 0.00 7.65 5.44 4.36 27.86 4.15 0.00 9.14 0.00 12.49 0.00 24 ER5a ExonRegion 0 58.02 77.73 120.08 118.06 102.37 103.03 87.27 86.91 46.72 96.93 263.59 253.16 119.15 232.84 246.06 113.64 146.51 21.45 37.60 65.32 36.35 74.85 37.84 25 E5_Da NovelBoundary 1 12.74 5.20 6.48 22.74 7.30 5.74 19.83 9.08 6.60 8.38 0.00 0.00 27.76 0.00 0.00 0.00 3.65 2.11 0.00 0.00 2.47 5.27 3.50 26 E5a_E6a KnownJunction 0 87.65 59.86 129.86 144.50 48.98 72.00 80.02 96.81 58.68 111.07 186.89 239.18 174.50 229.27 310.16 110.14 152.88 18.78 48.19 74.66 43.12 97.48 31.93 27 E6_Aa NovelBoundary 0 3.78 11.77 17.09 24.31 18.51 27.60 10.20 4.85 7.81 6.69 2.11 6.15 0.00 2.47 5.19 3.59 0.00 0.00 4.80 0.00 0.00 3.06 0.00 28 ER6a ExonRegion 0 68.52 57.57 118.11 109.21 85.57 77.97 83.96 84.63 58.38 112.04 201.47 209.60 109.00 217.59 233.55 95.05 124.39 19.51 37.61 65.71 29.07 81.44 34.14 29 E6_Da KnownBoundary 1 86.76 45.39 101.83 78.38 117.23 73.03 99.59 99.36 46.64 111.42 142.09 225.82 93.01 157.04 149.70 40.07 68.26 9.49 12.14 53.82 16.99 54.01 15.96 30 ER6b ExonRegion 1 37.64 30.21 55.06 50.25 38.40 35.37 38.97 48.59 32.19 65.10 55.64 118.66 52.97 81.22 108.83 30.57 31.92 6.23 14.17 24.65 6.30 57.15 7.54 31 E6_Db NovelBoundary 0 35.04 12.83 28.86 12.49 4.16 7.44 9.19 14.42 2.95 10.56 6.32 52.82 6.17 33.79 26.45 0.00 3.74 2.11 0.00 12.46 0.00 7.72 0.00 32 ER6c ExonRegion 0 11.33 3.35 13.26 4.89 0.94 2.48 2.57 7.93 1.24 4.59 2.62 9.42 2.48 7.07 11.61 0.00 0.00 0.00 0.75 1.00 0.00 1.10 0.00 33 ER7a ExonRegion 0 0.50 0.18 0.04 0.12 0.00 0.00 0.04 0.00 0.22 0.44 0.00 0.76 0.14 0.24 0.00 0.00 0.00 0.00 0.09 0.31 0.00 0.00 0.00 34 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.49 2.70 0.00 0.00 0.96 0.00 0.00 0.00 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.99