Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRAK2 Gene 0 61.34 49.35 35.52 38.13 102.74 128.44 78.40 49.67 59.08 49.59 44.93 42.64 51.11 51.29 23.23 31.56 35.77 45.97 23.81 36.80 54.67 60.54 50.68 2 332624 Transcript 0 39.57 40.43 36.49 39.68 80.68 156.64 88.62 72.71 96.55 71.71 91.01 98.93 117.83 110.60 39.37 71.75 64.59 99.95 38.23 62.93 114.07 104.75 98.96 3 430254 Transcript 0 12.86 0.56 4.41 3.41 5.14 1.01 5.82 3.60 3.26 3.75 1.95 2.37 5.52 0.68 0.80 0.81 0.25 2.03 0.87 1.22 1.21 0.00 0.00 4 451703 Transcript 0 0.43 1.22 2.22 0.41 1.35 0.74 1.88 0.76 2.42 1.75 0.00 0.00 1.98 0.30 0.41 0.30 0.36 0.56 0.32 0.65 0.22 0.00 0.89 5 440597 Transcript 0 3.56 1.71 0.00 0.00 0.75 0.00 0.37 1.65 0.49 0.00 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.00 6 486291 Transcript 0 0.89 0.38 0.24 0.19 2.06 6.97 3.95 1.42 2.71 1.31 2.61 2.93 3.36 3.59 0.56 1.88 4.17 5.23 0.36 3.07 6.55 2.24 3.26 7 ER1a ExonRegion 0 15.74 1.58 2.60 0.75 9.13 14.76 8.08 0.43 3.60 2.90 9.81 0.00 0.00 12.75 4.32 16.42 3.96 15.13 4.06 2.82 42.39 21.80 29.55 8 E1_Ab KnownBoundary 0 37.49 5.66 7.04 2.06 16.21 27.71 20.23 2.05 6.02 7.63 7.79 0.00 0.00 30.14 0.00 19.05 12.62 36.40 0.00 6.52 62.95 24.92 44.22 9 ER1b ExonRegion 0 12.25 2.94 3.49 2.61 9.00 19.39 12.68 1.73 3.42 4.88 4.07 0.00 0.00 8.22 5.12 6.58 4.14 11.60 0.81 3.40 26.91 10.11 15.75 10 E1_Ac KnownBoundary 0 9.11 3.03 0.00 1.66 7.22 39.30 21.11 1.93 4.77 5.78 2.47 0.00 0.00 0.00 13.97 3.93 4.39 5.43 3.95 8.69 13.78 8.14 4.01 11 ER1c ExonRegion 0 2.28 0.45 1.61 0.90 9.53 13.07 10.15 2.85 3.31 3.59 15.59 0.55 6.97 13.92 9.97 9.72 14.23 10.78 8.32 5.87 51.24 29.82 18.65 12 E1a_E3a KnownJunction 0 10.82 0.00 5.91 3.66 13.92 2.44 16.83 10.64 10.10 4.16 24.80 6.60 6.33 20.25 5.44 23.16 8.51 17.78 9.04 11.51 61.04 61.72 63.08 13 ER2a ExonRegion 0 7.12 3.42 0.00 0.00 1.50 0.00 0.74 0.76 0.98 0.00 0.00 4.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 17.20 13.45 13.31 8.66 41.63 70.03 52.45 29.70 50.52 45.42 75.36 47.89 67.47 60.76 14.94 44.63 56.04 61.32 28.79 42.81 68.09 68.51 70.37 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3a_E5a KnownJunction 1 41.27 11.31 15.85 15.02 47.62 88.70 51.67 37.87 77.05 75.59 76.44 99.78 82.46 79.88 10.75 63.40 58.16 80.30 63.34 72.16 85.99 107.89 97.23 18 ER4a ExonRegion 0 0.86 2.44 4.43 0.82 2.71 1.48 3.75 1.53 4.84 3.50 0.00 0.00 3.96 0.60 0.83 0.60 0.72 1.11 0.64 1.29 0.45 0.00 1.78 19 ER5a ExonRegion 1 23.44 19.23 14.99 13.80 60.79 91.29 65.76 36.87 58.71 39.22 89.96 85.99 82.47 108.06 19.82 55.07 78.21 86.03 33.99 61.61 96.78 75.75 88.02 20 E5a_E6a KnownJunction 0 14.74 14.27 12.80 8.96 30.56 104.66 101.84 34.42 49.36 31.03 71.18 100.98 52.76 108.25 25.47 38.37 64.70 98.58 40.19 63.47 80.31 52.05 100.05 21 E5a_E7b NovelJunction 0 0.00 2.63 13.16 9.22 3.82 0.00 2.25 0.00 7.20 0.00 7.74 6.30 0.00 0.00 0.00 3.59 0.00 8.87 9.13 6.07 3.09 0.00 0.00 22 Ix Intron 0 3.05 4.13 0.78 2.41 4.23 9.30 11.09 2.35 7.86 3.85 3.95 12.18 15.63 4.81 0.98 2.81 4.00 1.51 1.18 6.76 3.51 7.70 4.68 23 Ix_AR3 ActiveIntronRegion 0 4.14 4.42 0.58 2.73 3.59 10.93 10.12 3.30 12.41 8.33 4.01 11.62 18.42 6.15 0.89 4.12 5.24 1.65 1.01 6.42 4.57 10.91 8.19 24 Ix_SR1 SilentIntronRegion 0 1.67 5.82 0.00 2.47 4.30 14.97 12.98 5.74 8.64 6.21 4.69 19.94 19.79 4.40 0.77 3.38 1.91 1.37 0.53 10.90 2.29 13.86 5.40 25 Ix_AR2 ActiveIntronRegion 0 4.77 1.32 1.00 6.12 3.80 8.53 12.69 6.47 13.21 7.79 2.92 22.86 20.18 7.14 2.90 5.46 2.92 0.09 0.00 7.67 1.69 9.59 7.17 26 Ix_AR1 ActiveIntronRegion 0 2.90 7.11 0.81 1.71 3.08 12.77 6.70 1.65 9.07 2.88 3.75 13.13 16.45 6.49 0.26 2.31 7.18 0.68 2.02 4.55 3.80 9.87 3.96 27 E6_Aa NovelBoundary 0 17.48 15.00 0.00 2.06 10.70 44.75 20.31 4.11 7.00 2.98 9.69 18.61 6.82 4.89 9.52 7.18 0.00 1.78 4.80 9.20 5.37 5.39 8.45 28 ER6a ExonRegion 1 12.34 17.19 8.32 7.27 35.06 71.68 50.36 33.85 48.14 33.59 83.27 82.60 36.06 103.25 12.25 47.17 84.28 86.36 18.00 69.77 109.24 69.81 95.04 29 E6_Da NovelBoundary 0 0.00 13.35 0.00 0.00 3.14 15.22 4.24 0.00 17.79 3.89 5.05 5.70 6.49 6.30 0.00 3.25 0.00 8.08 0.00 11.38 3.15 5.14 8.62 30 E6a_E7b KnownJunction 0 16.08 9.80 11.12 6.09 42.95 121.46 76.58 38.24 50.00 34.76 83.34 86.28 62.50 105.36 22.87 50.24 76.48 104.30 18.45 66.22 107.74 64.85 90.06 31 Ix Intron 0 3.91 5.94 2.25 2.29 6.03 13.54 7.94 4.62 11.70 5.26 5.35 7.86 20.31 3.73 0.63 3.20 3.38 3.63 1.96 6.11 7.11 9.40 5.12 32 Ix_AR1 ActiveIntronRegion 0 3.44 7.13 1.89 3.41 8.94 9.33 3.77 3.27 4.38 1.70 9.07 0.00 18.76 1.93 0.00 4.87 0.00 0.00 3.57 10.01 6.42 10.78 3.52 33 Ix_SR1 SilentIntronRegion 0 3.96 5.83 2.29 2.18 5.75 13.99 8.37 4.77 12.46 5.63 4.98 8.67 20.51 3.92 0.69 3.04 3.73 4.00 1.80 5.73 7.20 9.28 5.29 34 ER7a ExonRegion 0 1.18 0.56 0.48 0.38 3.86 13.24 7.28 1.73 5.08 2.61 5.05 5.53 5.99 7.04 1.13 2.64 7.70 10.27 0.71 6.15 13.10 4.28 6.53 35 ER7b ExonRegion 1 37.77 26.00 15.60 14.18 49.55 127.65 68.97 31.80 68.21 52.08 84.45 90.47 62.63 121.16 22.53 58.34 84.23 111.25 33.67 60.97 120.86 57.10 101.44 36 E7a_E8a KnownJunction 0 37.49 44.99 16.06 18.55 68.68 125.61 96.63 51.34 73.15 62.53 122.35 30.16 33.76 100.65 29.17 37.51 84.71 115.57 38.78 87.57 148.45 62.89 135.56 37 ER8a ExonRegion 0 30.31 33.19 23.05 24.95 66.18 133.58 90.21 47.38 80.95 63.69 86.96 80.40 79.15 110.92 26.50 63.66 83.03 98.07 41.56 61.71 125.29 71.41 113.58 38 E8_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 2.68 0.00 0.00 2.24 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 39 E8a_E9a KnownJunction 0 30.45 23.68 29.92 36.26 63.16 146.05 79.18 66.25 95.95 67.99 70.75 61.22 35.06 105.77 34.86 61.86 65.17 59.44 54.03 85.90 106.94 98.95 102.69 40 ER8b ExonRegion 0 0.60 0.19 0.00 0.00 0.25 0.69 0.63 1.11 0.35 0.00 0.18 0.34 0.73 0.15 0.00 1.12 0.63 0.19 0.01 0.00 0.00 0.20 0.00 41 ER9a ExonRegion 0 34.78 32.46 26.71 35.66 69.16 173.58 106.65 66.12 93.62 69.55 87.71 96.73 78.90 111.45 29.49 47.25 94.81 82.59 47.78 71.42 127.45 100.98 90.03 42 E9a_E10a KnownJunction 0 28.67 45.06 30.10 39.12 61.21 228.22 107.40 65.39 93.52 70.49 85.97 126.49 65.74 98.59 51.18 47.77 108.65 94.72 62.59 55.35 125.66 89.52 93.81 43 ER10a ExonRegion 0 34.93 40.55 35.74 41.72 84.95 178.97 110.23 70.95 97.86 77.62 107.24 99.12 102.75 131.64 43.59 75.30 94.57 99.20 57.09 74.97 120.26 107.28 119.51 44 E10_Da KnownBoundary 0 13.63 0.00 4.11 3.76 0.00 0.00 0.00 4.85 1.79 3.89 9.32 12.45 0.00 0.00 0.00 0.00 4.21 0.00 0.00 0.00 0.00 0.00 0.00 45 E10a_E11a KnownJunction 0 27.26 60.91 36.87 39.26 47.11 158.77 103.96 85.06 98.87 70.54 107.24 151.85 163.63 133.85 27.57 56.65 92.94 64.87 51.86 71.40 112.87 130.24 96.37 46 ER10b ExonRegion 0 12.86 0.56 4.41 3.41 5.14 1.01 5.82 3.60 3.26 3.75 1.95 2.37 5.52 0.68 0.80 0.81 0.25 2.03 0.87 1.22 1.21 0.00 0.00 47 ER11a ExonRegion 0 30.42 43.06 26.91 34.62 80.42 145.48 90.05 65.13 105.69 73.39 116.31 142.47 151.27 121.61 34.93 57.03 95.11 79.53 36.87 68.34 115.09 119.21 76.24 48 E11a_E12a KnownJunction 0 39.27 44.53 22.21 45.48 110.02 156.61 97.42 66.33 105.70 75.94 141.83 132.94 133.76 124.85 70.34 45.54 71.62 100.07 17.04 78.62 126.15 111.38 87.33 49 ER12a ExonRegion 0 51.13 48.89 26.49 39.10 120.25 190.21 106.92 64.40 101.53 67.33 119.60 134.43 145.90 127.59 36.92 72.36 74.70 86.51 42.61 69.60 104.66 141.72 124.62 50 E12a_E13a KnownJunction 0 29.86 56.04 32.52 32.63 124.45 188.81 81.08 83.87 90.51 80.13 105.97 155.00 174.34 111.78 42.28 74.68 61.52 101.02 49.70 61.62 77.10 137.22 97.83 51 ER13a ExonRegion 0 43.76 41.26 28.61 40.60 87.83 167.98 109.77 62.85 98.64 78.41 95.15 152.72 159.46 115.21 40.00 80.40 73.65 96.34 32.85 62.10 117.90 125.09 103.77 52 E13a_E14a KnownJunction 1 43.49 49.73 43.79 48.51 78.61 177.00 122.51 66.29 89.47 81.96 71.91 200.92 115.41 129.08 28.56 90.66 25.43 83.82 17.22 53.69 131.03 86.58 90.83 53 ER14a ExonRegion 0 35.53 53.70 26.15 30.70 78.28 184.59 100.08 52.58 79.88 63.70 83.89 99.24 114.24 115.48 32.71 81.05 60.79 111.93 32.31 64.88 154.12 106.57 97.28 54 E14a_E15a KnownJunction 1 41.41 46.37 30.81 35.49 23.60 70.30 61.43 71.30 75.46 59.07 57.28 91.53 87.98 117.72 19.53 97.58 64.89 99.65 34.73 62.26 125.10 100.91 136.24 55 ER15a ExonRegion 0 31.02 30.55 36.11 32.14 59.90 158.16 79.17 71.94 100.78 75.14 97.58 56.40 90.13 111.10 40.26 82.15 86.63 133.21 46.98 67.96 171.37 91.86 100.23 56 E15a_E16a KnownJunction 0 42.30 28.02 39.09 36.69 114.09 241.28 143.66 92.17 127.54 72.50 76.60 73.82 133.92 117.19 38.32 110.57 58.81 155.95 22.49 74.72 149.62 116.71 130.86 57 ER16a ExonRegion 0 50.89 38.09 35.35 36.11 73.88 143.67 79.64 81.62 123.26 79.48 119.64 65.66 129.69 118.18 50.07 92.71 88.95 126.21 57.84 63.28 134.74 98.07 108.41 58 E16a_E17a KnownJunction 1 45.93 25.26 52.98 49.04 78.44 173.14 65.89 106.38 125.29 90.95 67.60 44.11 126.29 78.46 23.36 31.62 55.82 70.43 32.19 87.06 82.35 38.76 89.12 59 ER17a ExonRegion 0 33.98 27.17 50.60 53.55 56.97 168.29 71.01 106.76 130.02 87.34 105.82 83.61 143.89 136.55 71.87 93.45 84.02 122.33 50.09 75.61 135.34 117.03 136.00 60 E17a_E18a KnownJunction 0 14.67 17.37 77.50 63.76 73.01 160.36 84.66 98.04 123.26 103.23 140.72 64.07 93.66 174.58 83.69 117.32 76.76 223.14 99.49 72.35 128.00 176.66 139.82 61 ER18a ExonRegion 0 95.99 74.80 51.72 56.11 155.54 163.38 101.13 60.91 61.77 57.00 30.16 33.08 39.51 34.26 24.54 19.59 22.35 28.96 21.52 33.50 31.41 60.88 37.80