Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MOBKL3 Gene 0 77.70 105.31 85.20 137.22 109.78 143.86 136.44 83.79 82.33 109.71 96.88 147.58 84.54 71.14 85.62 54.76 85.70 54.16 52.75 97.56 28.67 179.01 60.10 2 233892 Transcript 0 0.00 0.00 0.00 0.00 1.34 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 409916 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 323303 Transcript 0 0.03 0.55 0.86 0.00 1.90 0.89 0.33 0.02 0.00 0.81 0.03 0.00 0.00 0.03 0.04 0.04 0.84 0.15 0.80 0.50 1.02 0.17 0.23 5 448447 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 392303 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 497443 Transcript 0 0.00 1.68 0.00 1.73 0.00 0.00 0.93 0.00 2.58 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 8 417097 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 4.19 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 2.41 0.00 0.00 9 409355 Transcript 0 0.00 0.00 4.20 0.00 0.00 0.00 0.00 2.26 0.00 3.01 0.00 0.00 0.00 5.30 0.00 0.00 0.00 5.06 0.00 0.00 0.00 0.00 3.50 10 409360 Transcript 0 0.00 0.01 0.48 0.80 0.35 0.00 0.00 0.00 1.27 0.22 1.41 0.46 0.00 0.17 2.29 2.38 0.43 0.00 0.41 0.28 1.65 0.27 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 2.68 0.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 0.02 1.03 0.19 2.17 2.52 0.84 1.47 0.08 0.98 2.48 0.09 5.67 2.05 0.08 0.11 1.53 0.16 0.00 4.73 0.00 1.09 0.00 0.00 13 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2a ExonRegion 0 0.03 0.55 0.86 0.00 1.90 0.89 0.33 0.02 0.00 0.81 0.03 0.00 0.00 0.03 0.04 0.04 0.84 0.15 0.80 0.50 1.02 0.17 0.23 16 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2_Ac KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.00 4.10 18 E2_Ad KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 5.79 2.16 2.46 0.00 0.00 2.68 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 3.26 6.30 3.12 0.00 19 ER2b ExonRegion 1 37.09 23.14 4.55 6.10 22.68 66.10 37.07 5.84 5.65 3.71 38.11 0.00 0.00 20.19 49.18 46.00 44.64 16.10 21.84 28.67 28.86 25.99 24.33 20 E2_Ae KnownBoundary 1 214.48 178.13 34.03 31.13 195.25 399.43 276.24 26.53 35.04 37.61 195.10 0.00 0.00 23.19 116.82 154.92 250.86 121.71 103.53 118.12 143.26 85.11 145.97 21 ER2c ExonRegion 1 83.60 63.38 15.11 14.54 55.30 155.57 88.26 14.40 15.44 12.81 92.13 0.00 0.00 50.89 106.38 97.58 114.98 40.96 46.19 59.22 70.15 50.35 56.78 22 ER2d ExonRegion 1 147.10 135.64 34.56 27.26 131.11 315.41 196.74 19.88 31.37 37.85 174.93 0.00 0.00 65.29 160.73 147.42 219.51 104.21 82.82 96.17 117.68 68.55 123.93 23 ER2e ExonRegion 1 363.70 431.32 141.39 157.79 380.43 707.46 528.09 69.75 107.02 177.31 349.20 13.76 24.21 149.16 224.15 340.16 491.03 497.67 233.71 247.77 224.92 261.62 364.38 24 E2a_E4a KnownJunction 1 119.21 122.15 154.05 187.59 69.27 130.78 91.11 83.79 113.66 189.27 108.71 17.56 6.82 29.43 41.04 153.21 158.95 514.98 78.97 84.24 67.71 86.46 154.42 25 E2a_E5a KnownJunction 0 8.59 26.64 34.98 63.83 15.79 19.87 22.79 14.79 28.41 29.49 24.85 0.00 6.17 2.47 5.32 22.05 24.50 70.55 19.77 13.36 7.97 15.61 55.91 26 E2a_E6a KnownJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 4.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 0.00 0.02 0.96 1.59 0.70 0.00 0.00 0.00 0.75 0.44 0.25 0.93 0.00 0.35 0.13 1.43 0.86 0.00 0.83 0.55 0.39 0.54 0.00 28 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.58 0.00 0.00 0.00 4.45 3.33 0.00 0.00 0.00 0.00 2.90 0.00 0.00 29 E4_Aa NovelBoundary 0 20.74 9.47 19.72 19.91 36.33 2.73 51.23 13.27 12.24 9.54 0.00 0.00 13.31 0.00 8.90 26.83 8.98 2.11 0.00 3.13 0.00 3.06 4.27 30 ER4a ExonRegion 1 53.25 40.09 74.32 100.14 42.34 60.86 62.25 54.49 63.62 108.94 128.09 64.46 21.89 47.28 45.64 87.18 146.18 187.77 35.34 64.78 66.01 71.63 71.23 31 E4a_E5a KnownJunction 1 64.46 30.85 89.09 97.19 26.15 48.55 43.28 56.97 70.98 131.09 290.92 138.80 40.09 64.87 45.00 59.30 318.37 40.62 29.18 112.49 159.32 82.30 37.39 32 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 4.19 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 2.41 0.00 0.00 33 ER5a ExonRegion 1 77.03 74.31 161.97 163.92 62.25 97.67 86.21 111.76 133.36 204.98 497.03 123.62 51.53 201.97 243.17 207.89 573.75 219.27 167.86 246.53 239.54 262.63 201.08 34 E5_Da NovelBoundary 0 56.60 89.85 157.68 183.23 66.13 146.56 126.04 115.62 131.51 178.01 217.69 191.01 71.42 339.04 431.05 408.10 232.73 370.59 272.10 314.28 111.32 443.45 306.20 35 E5a_E6a KnownJunction 0 0.00 0.00 4.20 0.00 0.00 0.00 0.00 2.26 0.00 3.01 0.00 0.00 0.00 5.30 0.00 0.00 0.00 5.06 0.00 0.00 0.00 0.00 3.50 36 E5b_E6a KnownJunction 1 54.31 93.93 192.87 218.39 213.07 196.08 147.02 113.57 158.79 164.10 304.60 166.85 79.38 177.76 294.46 469.02 293.41 600.95 200.48 309.87 98.66 353.19 445.17 37 ER5b ExonRegion 1 42.50 77.19 188.17 218.82 127.26 150.08 114.34 129.63 155.72 192.18 269.68 162.27 75.98 262.91 370.20 433.22 280.18 550.33 217.75 288.34 106.57 369.62 379.06 38 E6_Aa NovelBoundary 0 10.22 3.03 1.83 21.18 8.49 0.00 14.40 6.82 4.66 11.71 0.00 6.15 6.17 0.00 0.00 8.46 8.79 1.62 21.27 8.69 0.00 3.06 3.33 39 ER6a ExonRegion 1 32.29 83.71 206.60 246.49 375.23 487.58 220.12 155.48 157.35 187.53 386.49 207.21 104.93 189.23 228.66 389.21 285.80 550.67 181.86 253.64 130.22 316.31 384.02 40 E6a_E7a KnownJunction 1 46.38 113.53 164.87 226.11 612.48 898.86 386.34 157.56 116.61 155.10 446.43 299.80 79.05 238.04 245.63 347.34 321.27 230.11 185.32 280.28 163.15 301.76 328.82 41 ER7a ExonRegion 0 69.85 183.79 178.95 202.76 268.28 543.44 407.14 150.63 158.25 184.84 363.81 256.78 110.84 244.78 219.49 181.91 351.87 180.65 114.16 229.69 125.81 277.87 155.00 42 E7a_E8a KnownJunction 1 99.87 328.82 180.98 181.20 130.39 259.96 306.22 187.54 168.98 229.03 388.89 258.23 67.20 319.68 261.70 165.60 347.08 106.58 118.31 235.98 127.08 312.05 104.06 43 E7a_E9a KnownJunction 0 0.00 3.35 0.00 1.80 0.00 0.00 1.85 0.00 5.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 44 ER8a ExonRegion 1 191.97 262.92 188.39 196.80 155.76 281.17 265.97 154.18 146.50 217.57 427.61 305.44 117.66 281.48 296.83 195.01 352.25 106.36 130.72 251.91 109.36 366.49 120.33 45 E8a_E9a KnownJunction 0 178.48 196.74 167.41 201.31 184.89 221.18 226.29 116.81 129.95 206.51 277.54 349.91 161.03 261.41 195.07 123.13 256.94 76.36 103.16 178.27 42.13 283.20 126.59 46 E9_Aa NovelBoundary 0 22.00 0.00 29.98 13.22 7.72 2.50 21.07 12.40 1.42 7.44 0.00 0.00 0.00 4.94 9.27 0.00 0.00 5.06 0.00 6.20 0.00 0.00 4.27 47 ER9a ExonRegion 0 195.17 194.12 191.45 241.06 204.26 251.25 255.73 169.37 177.45 248.02 323.81 409.52 195.56 284.92 316.37 154.18 272.12 91.10 96.58 228.51 50.39 368.08 128.40 48 E9a_E10a KnownJunction 0 209.37 163.98 202.24 279.39 255.77 313.29 283.17 201.71 180.15 235.79 288.23 530.27 163.14 314.32 376.04 151.24 235.16 52.69 85.56 229.40 33.17 495.20 108.16 49 ER10a ExonRegion 0 83.36 125.62 189.03 299.51 199.49 235.68 222.10 194.41 179.46 247.59 203.94 481.59 241.59 223.48 309.66 105.13 151.89 56.20 69.19 189.62 23.28 465.17 105.52 50 E10_Da KnownBoundary 1 87.79 159.91 151.27 235.33 162.05 293.86 301.68 161.79 183.36 191.12 152.88 511.22 311.51 147.63 302.00 84.68 130.15 31.63 75.67 187.02 23.97 486.87 87.75 51 ER10b ExonRegion 1 98.17 131.48 153.60 242.17 159.72 258.88 224.51 147.98 174.36 164.34 119.54 510.38 255.61 137.61 182.28 65.67 118.96 42.53 74.24 176.27 18.56 384.61 97.36 52 E10_Db KnownBoundary 1 150.92 140.50 154.90 255.18 236.16 280.01 282.82 152.43 150.49 142.74 110.24 452.25 215.89 147.63 141.67 67.93 114.63 41.74 86.31 215.02 24.22 423.98 103.72 53 ER10c ExonRegion 1 85.65 95.09 107.76 201.00 151.71 191.96 163.94 130.35 126.61 128.09 110.92 374.72 216.96 94.08 114.45 43.03 97.14 35.05 51.73 141.73 17.95 347.58 79.81 54 E10_Dc KnownBoundary 1 106.69 91.96 90.92 207.80 129.71 151.05 153.29 102.07 130.79 128.29 70.23 246.53 131.81 56.15 53.90 42.72 92.19 26.70 67.48 124.38 14.70 314.01 87.50 55 ER10d ExonRegion 0 59.60 114.88 72.86 130.26 112.43 162.24 147.30 104.81 102.81 117.25 114.45 220.63 130.62 60.89 43.55 29.51 87.08 35.77 62.66 111.45 23.93 247.75 72.12 56 E10_Dd KnownBoundary 0 42.60 120.50 54.76 119.03 134.38 243.72 271.38 81.00 80.82 128.53 124.24 180.66 118.50 70.40 53.90 28.45 85.55 38.22 64.19 124.06 28.23 277.57 78.88 57 ER10e ExonRegion 0 37.06 70.24 70.71 172.82 116.67 196.62 167.46 106.23 110.13 151.15 88.50 211.11 108.47 81.90 60.81 54.94 62.56 58.75 82.28 110.87 17.84 309.36 90.86 58 E10_De KnownBoundary 0 122.84 60.38 127.79 265.90 126.32 163.77 169.89 127.86 128.79 176.67 114.29 200.02 137.33 72.75 75.53 36.06 92.66 52.73 127.82 191.50 24.53 272.12 73.75 59 ER10f ExonRegion 0 127.14 59.00 95.11 202.15 87.96 165.35 152.39 101.20 120.21 147.09 106.34 186.41 106.62 91.87 57.25 46.30 81.50 48.43 87.04 146.39 34.64 272.47 83.55 60 E10_Df KnownBoundary 1 142.91 86.63 61.50 130.99 78.78 170.81 138.63 80.38 78.99 94.61 79.07 159.80 115.58 91.88 24.97 19.65 79.76 48.96 82.64 125.92 32.19 186.88 46.10 61 E10_Dg KnownBoundary 1 135.65 125.57 66.38 183.96 156.96 133.05 247.75 109.63 126.30 136.32 146.56 105.78 14.93 89.76 79.61 53.06 72.18 47.96 55.53 172.19 61.78 178.13 66.84 62 ER10g ExonRegion 0 139.27 114.12 75.97 196.36 122.44 160.57 201.98 118.30 131.66 152.26 119.45 174.74 82.92 96.28 57.56 47.44 95.59 70.14 84.48 160.77 60.29 217.69 64.61 63 ER10h ExonRegion 0 80.39 112.74 74.40 130.11 101.83 114.92 123.80 74.94 69.88 94.27 47.56 105.23 71.50 35.15 47.00 25.82 37.65 25.35 39.48 74.48 13.51 139.25 33.39 64 IG44_AR1 ActiveIntergenicRegion 0 4.54 14.82 7.63 18.50 9.46 9.23 16.60 6.62 5.32 6.41 1.66 9.25 5.88 1.29 1.54 1.59 3.18 2.56 3.75 8.43 0.94 1.79 2.20 65 IG44_AR2 ActiveIntergenicRegion 0 19.93 7.84 13.24 20.14 17.68 12.54 18.88 10.85 8.80 8.99 0.97 5.26 4.22 2.64 3.19 2.88 2.62 2.61 3.80 6.37 5.67 15.22 8.68 66 IG44_SR3 SilentIntergenicRegion 0 28.27 8.11 15.26 26.44 13.62 10.02 13.70 15.71 10.22 16.53 0.00 1.68 3.54 1.10 3.35 4.43 8.22 1.75 8.10 7.28 3.53 14.54 10.38 67 IG44_AR3 ActiveIntergenicRegion 0 29.49 12.34 20.70 24.95 17.44 17.20 37.80 11.92 15.55 13.33 0.00 20.15 9.06 0.28 0.00 2.97 2.50 1.40 4.61 1.10 4.10 25.51 8.81 68 IG44_SR4 SilentIntergenicRegion 0 25.27 7.12 14.70 20.95 21.07 15.47 41.95 8.64 13.51 10.47 0.00 25.98 10.26 1.62 3.45 2.23 1.65 0.00 1.19 5.59 0.14 19.53 3.12 69 IG44_AR4 ActiveIntergenicRegion 0 6.14 3.66 3.45 7.77 13.22 6.63 8.58 4.60 4.20 7.27 0.34 2.27 5.42 1.24 3.13 1.55 0.48 0.80 1.04 1.85 1.15 9.28 1.99 70 IG44_SR5 SilentIntergenicRegion 0 10.27 18.06 10.56 13.84 14.64 8.33 12.02 8.24 12.92 10.59 1.60 8.54 7.72 4.90 6.24 3.68 4.77 1.42 2.63 3.51 2.95 19.14 4.85