Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CALCRL Gene 0 38.70 12.56 36.91 42.90 72.32 20.99 30.83 53.45 85.05 18.00 11.28 13.92 48.33 71.86 25.08 6.17 31.07 0.13 0.45 0.88 17.50 49.10 12.29 2 409998 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 392370 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 436409 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 485973 Transcript 0 3.14 0.68 2.20 8.48 3.25 0.75 2.49 6.67 2.01 0.03 0.09 2.50 10.49 1.80 0.03 1.80 0.19 0.54 0.00 0.00 0.79 3.37 0.08 6 461244 Transcript 0 0.00 0.00 0.00 0.24 0.00 0.00 0.16 0.00 0.23 0.00 0.00 0.00 0.81 1.93 0.00 0.00 3.78 0.00 0.00 0.00 0.00 0.00 0.00 7 474212 Transcript 0 3.78 0.00 1.51 4.13 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 6.82 11.65 17.80 0.00 8.60 0.00 0.00 0.00 3.15 21.55 18.10 8 410102 Transcript 0 0.00 0.00 1.09 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 2.41 0.00 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 447403 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 410068 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 479784 Transcript 0 1.37 0.28 0.09 0.00 0.74 0.00 0.49 0.00 0.00 0.02 0.18 1.13 2.21 1.07 2.90 0.85 0.30 0.00 0.29 0.49 0.20 0.19 0.68 12 ER1a ExonRegion 0 0.74 0.00 0.00 0.52 0.12 1.38 0.12 0.00 0.94 0.00 0.44 0.00 0.00 2.96 0.89 1.36 2.08 0.00 0.80 0.00 3.56 1.77 2.46 13 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 12.61 0.00 9.54 0.00 0.00 0.00 3.15 3.00 4.35 14 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ad KnownBoundary 0 22.23 0.00 1.30 0.00 3.82 16.58 7.20 0.00 2.63 0.00 14.27 0.00 0.00 18.72 4.70 3.85 12.34 0.00 0.00 0.00 42.38 19.53 4.01 16 ER1b ExonRegion 0 21.17 0.00 0.74 1.36 2.68 23.11 5.83 0.00 6.67 0.00 12.76 0.00 0.00 54.57 11.61 14.86 28.39 0.00 0.00 0.00 46.72 27.50 8.81 17 ER1c ExonRegion 0 21.17 0.00 1.23 1.36 2.68 23.84 7.94 0.00 9.88 0.00 13.53 0.00 0.00 69.84 11.61 14.86 29.71 0.00 0.00 0.00 52.89 35.42 8.81 18 ER1d ExonRegion 0 41.09 7.83 5.75 18.18 51.87 29.25 34.50 18.17 58.10 4.02 17.67 2.37 6.95 97.60 18.58 15.14 49.48 0.00 0.00 1.02 45.49 58.24 27.04 19 E1_Ae KnownBoundary 0 10.15 0.00 9.20 1.83 26.99 20.33 4.33 13.80 27.81 3.60 4.69 11.40 28.08 20.13 0.00 0.00 17.86 0.00 0.00 0.00 21.31 6.25 3.50 20 ER1e ExonRegion 1 5.30 0.97 10.12 14.09 7.68 12.89 2.29 23.25 72.79 7.81 25.29 9.06 21.30 87.28 10.71 9.03 59.51 1.14 0.00 0.00 59.71 42.45 17.48 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E1a_E3a KnownJunction 0 3.78 0.00 1.51 4.13 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 6.82 11.65 17.80 0.00 8.60 0.00 0.00 0.00 3.15 21.55 18.10 23 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E1a_E6a KnownJunction 1 2.82 0.00 12.74 19.71 18.25 5.22 6.40 19.39 47.83 8.41 6.84 6.00 28.73 121.37 4.45 10.94 0.00 1.70 0.00 0.00 4.76 51.86 8.11 25 ER2a ExonRegion 0 0.00 0.00 0.00 0.72 0.00 0.00 0.49 0.00 0.69 0.00 0.00 0.00 2.43 3.31 0.00 0.00 7.52 0.00 0.00 0.00 0.00 0.00 0.00 26 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 3.83 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 2.69 0.00 1.95 1.64 0.00 0.00 1.08 1.00 2.66 0.12 3.08 0.00 5.80 12.55 12.88 0.00 14.60 0.00 0.00 0.00 1.05 8.83 10.20 28 E3a_E4a KnownJunction 0 0.00 0.00 3.13 0.00 0.00 0.00 0.00 2.55 4.02 0.00 0.00 0.00 0.00 14.36 0.00 0.00 13.37 0.00 0.00 0.00 0.00 3.12 0.00 29 ER4a ExonRegion 0 3.89 0.00 13.06 11.78 10.35 4.75 4.91 10.83 58.54 9.85 10.74 11.14 12.76 52.02 13.95 10.49 25.34 0.00 0.00 0.00 9.46 29.38 10.15 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E6a KnownJunction 0 0.00 0.00 16.44 10.16 46.60 8.52 9.58 8.95 35.13 12.81 0.00 6.30 0.00 26.37 0.00 0.00 29.27 0.00 0.00 0.00 10.75 8.27 3.33 32 ER5a ExonRegion 0 2.73 0.56 0.17 0.00 1.49 0.00 0.98 0.00 0.00 0.04 0.36 2.25 4.43 2.14 5.80 1.71 0.61 0.00 0.59 0.98 0.41 0.38 1.35 33 E5_Da NovelBoundary 1 0.00 0.00 7.04 13.85 3.48 0.00 17.93 6.94 10.47 1.16 0.00 31.51 8.28 2.94 0.00 3.93 0.00 0.00 0.00 0.00 0.00 6.12 0.00 34 Ix_AR2 ActiveIntronRegion 0 0.00 0.00 6.13 4.09 2.68 0.00 1.32 15.56 5.12 0.82 1.93 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 5.03 35 ER6a ExonRegion 1 9.19 3.62 20.27 32.36 71.83 22.49 25.29 46.76 101.18 16.80 12.64 14.13 60.66 85.10 11.99 8.66 31.74 0.67 0.00 0.00 13.80 54.29 15.55 36 E6_Da KnownBoundary 0 3.63 0.00 5.38 6.83 0.00 0.00 1.99 6.70 1.39 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E6a_E6b KnownJunction 0 14.82 15.92 14.01 26.30 48.73 62.01 33.12 26.74 98.75 4.35 12.21 31.06 46.10 49.74 5.93 11.79 33.10 0.00 0.00 0.00 5.87 44.09 21.00 38 E6a_E6c KnownJunction 0 0.00 0.00 1.09 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 2.41 0.00 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E6a_E7a KnownJunction 0 6.96 0.00 6.30 16.75 26.83 5.34 4.15 5.63 19.07 3.04 4.37 0.00 25.65 21.13 0.00 7.78 7.48 2.24 0.00 0.00 0.00 16.84 0.00 40 ER6b ExonRegion 0 3.14 0.68 2.20 8.48 3.25 0.75 2.49 6.67 2.01 0.03 0.09 2.50 10.49 1.80 0.03 1.80 0.19 0.54 0.00 0.00 0.79 3.37 0.08 41 E6_Ab KnownBoundary 0 6.82 0.00 0.00 8.06 8.06 0.00 3.93 4.97 1.77 0.00 0.00 0.00 6.82 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 42 E6_Ac KnownBoundary 1 17.71 11.58 17.53 22.97 62.90 34.87 45.27 29.74 66.64 9.46 7.53 49.52 50.16 76.76 17.80 3.33 34.50 0.00 0.00 0.00 11.12 58.36 4.27 43 ER6c ExonRegion 1 14.89 14.38 16.32 24.87 51.22 44.27 38.39 34.45 87.30 4.75 11.53 33.71 56.11 66.36 11.19 6.47 32.89 0.00 0.34 0.00 7.71 52.46 15.63 44 ER6d ExonRegion 1 22.19 8.29 20.35 19.04 48.00 32.01 29.49 41.74 82.49 8.53 10.28 38.37 53.65 71.85 20.44 8.15 36.96 0.64 2.32 0.00 13.46 53.19 2.31 45 E6_Db KnownBoundary 1 36.52 12.56 23.71 23.74 34.13 8.40 14.40 49.70 91.96 9.24 15.16 12.15 79.22 95.83 4.45 3.50 37.12 2.24 0.00 0.00 14.64 52.29 7.17 46 ER6e ExonRegion 1 22.45 2.67 21.05 22.57 29.43 4.48 12.48 39.27 93.22 7.88 11.85 30.09 101.80 78.17 10.51 7.99 34.47 1.61 0.00 0.00 14.13 63.84 9.77 47 E6d_E7a KnownJunction 1 27.63 5.39 22.18 28.43 26.15 7.04 14.44 52.37 103.36 8.03 10.42 41.56 101.45 75.34 21.51 20.17 37.68 0.00 0.00 0.00 8.40 94.85 29.36 48 E6d_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER6f ExonRegion 1 21.87 5.65 17.43 26.95 21.70 5.50 19.12 42.06 103.06 8.28 15.25 38.00 94.32 78.14 12.57 15.85 35.21 0.00 0.00 0.00 9.06 84.27 20.56 50 ER7a ExonRegion 0 19.29 10.33 18.51 29.76 43.83 21.69 22.63 44.38 132.75 17.28 16.62 26.33 108.63 120.18 27.61 14.35 57.44 1.13 0.00 0.81 13.17 97.61 12.05 51 E7_Da NovelBoundary 0 0.00 0.00 4.49 19.11 8.66 0.00 3.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E7a_E8a KnownJunction 0 6.30 5.66 9.02 11.79 55.01 48.67 18.33 35.98 95.11 12.84 10.06 31.21 54.87 142.27 22.13 3.33 58.25 0.00 0.00 3.00 19.03 65.27 6.83 53 ER8a ExonRegion 1 14.27 7.58 26.23 21.92 53.17 25.58 21.01 38.83 111.06 17.09 16.34 40.22 75.34 125.79 25.69 5.51 52.71 0.00 0.00 1.78 33.66 62.98 23.30 54 E8_Da KnownBoundary 1 36.60 3.35 39.29 35.96 60.02 15.50 34.40 37.01 141.75 18.88 19.11 25.21 112.01 110.01 9.52 11.96 52.73 0.00 0.00 3.07 47.82 80.03 32.44 55 ER8b ExonRegion 1 42.27 11.38 35.77 41.44 107.03 40.05 39.83 46.06 149.48 16.30 21.21 22.58 116.24 152.05 16.23 20.40 57.90 0.00 2.07 0.98 48.78 127.38 24.92 56 E8_Db KnownBoundary 1 60.31 18.09 31.43 28.97 163.75 62.46 55.07 34.91 89.06 9.03 17.32 44.26 170.44 186.06 24.85 24.27 65.54 0.00 4.80 0.00 45.96 141.82 16.48 57 ER8c ExonRegion 1 34.80 8.31 35.86 36.40 93.57 31.01 37.30 45.50 132.96 19.60 29.28 33.11 113.94 174.26 22.61 12.76 65.34 0.00 2.53 0.13 44.33 92.17 14.94 58 E8c_E9a KnownJunction 1 31.64 3.35 38.59 32.76 63.84 9.94 32.37 44.65 120.43 26.11 33.01 26.71 120.12 186.00 24.11 3.93 71.81 2.45 0.00 0.00 42.94 73.79 15.88 59 ER9a ExonRegion 1 27.08 7.76 34.06 29.07 52.37 13.25 35.29 51.08 110.91 22.28 31.16 28.19 118.50 166.99 18.65 6.55 77.60 0.00 0.00 3.39 60.85 64.08 31.82 60 E9_Da KnownBoundary 1 37.34 15.00 37.67 31.30 68.17 23.28 38.91 59.31 112.90 18.83 21.37 24.31 131.00 186.83 27.57 11.96 77.70 0.00 0.00 3.26 72.65 64.30 44.47 61 ER9b ExonRegion 0 17.24 16.14 32.93 32.69 59.73 7.93 28.04 46.28 109.31 14.61 27.96 26.26 75.49 151.12 27.47 10.26 58.94 0.00 0.00 1.06 60.92 65.80 30.50 62 E9b_E10a KnownJunction 0 20.89 16.38 30.60 29.70 87.69 5.79 36.13 49.78 121.84 16.52 29.69 11.85 66.55 125.96 33.25 11.88 70.59 0.00 0.00 2.56 55.97 69.38 40.46 63 ER10a ExonRegion 0 30.77 9.83 35.57 48.05 60.86 23.40 36.29 51.15 134.22 18.65 28.62 32.95 76.00 147.69 29.60 11.10 81.27 0.00 0.00 2.43 48.93 77.37 28.85 64 E10a_E11a KnownJunction 0 20.45 9.21 29.63 64.99 64.18 21.64 50.65 50.97 132.38 23.16 24.59 42.61 108.11 133.73 48.21 3.67 96.31 0.00 0.00 2.94 34.41 69.68 30.90 65 ER11a ExonRegion 0 26.20 12.64 20.37 47.12 60.64 17.80 35.49 45.45 129.67 20.32 25.82 30.12 84.17 134.34 32.58 15.41 79.83 0.00 0.00 2.13 37.99 81.42 26.14 66 E11a_E12a KnownJunction 0 29.56 20.92 23.68 44.95 69.52 18.63 48.27 31.13 131.91 17.84 7.58 26.11 40.74 118.96 24.72 8.37 69.66 0.00 0.00 3.26 33.61 62.64 19.80 67 ER12a ExonRegion 0 38.60 15.15 23.86 47.93 74.60 26.16 41.81 42.98 130.57 18.39 15.97 28.36 52.66 142.94 25.38 8.68 70.85 0.00 1.28 2.73 55.35 68.23 18.61 68 E12a_E13a KnownJunction 1 41.93 17.04 21.23 42.55 48.81 17.04 29.15 49.45 108.16 22.16 7.74 21.61 60.55 146.98 15.95 7.69 56.47 0.00 0.00 2.94 48.43 55.29 21.77 69 ER13a ExonRegion 0 34.81 15.09 20.19 47.77 51.20 27.92 36.15 48.65 136.37 18.02 19.05 21.31 49.09 161.33 31.27 7.70 61.50 0.00 0.00 2.27 50.37 67.04 30.64 70 E13a_E14a KnownJunction 1 46.01 17.63 32.73 45.75 71.99 32.77 59.44 43.62 122.77 25.06 27.74 12.45 49.19 143.27 19.66 3.33 82.75 0.00 0.00 0.00 31.20 84.20 30.30 71 ER14a ExonRegion 0 32.79 13.57 25.49 40.13 68.30 19.27 37.03 39.36 129.18 24.99 25.57 26.54 52.28 130.04 24.40 0.93 63.96 0.00 0.00 0.14 18.50 75.18 26.14 72 E14a_E15a KnownJunction 1 41.27 13.09 21.79 52.87 100.25 33.39 45.36 54.18 159.23 24.71 31.96 24.01 101.29 136.32 14.83 0.00 48.06 0.00 0.00 0.00 15.26 75.32 50.11 73 ER15a ExonRegion 0 48.87 8.59 19.61 45.48 88.98 37.33 57.09 48.35 140.18 20.59 23.25 22.36 79.66 160.35 37.54 13.44 60.25 0.00 0.00 0.00 28.91 70.75 37.96 74 E15a_E16a KnownJunction 0 59.64 17.76 26.94 47.71 90.07 55.31 66.20 49.54 139.99 24.31 17.16 34.51 41.07 138.27 52.78 8.54 97.52 0.00 0.00 0.00 21.87 64.23 32.95 75 ER16a ExonRegion 0 58.30 14.08 34.71 41.01 63.15 34.24 35.88 44.01 102.10 20.09 22.25 14.95 63.56 144.68 34.03 15.00 63.61 0.00 0.74 0.50 47.86 63.48 23.61 76 E16a_E17a KnownJunction 1 75.57 18.62 32.41 26.77 76.83 23.57 36.83 56.19 91.03 18.88 20.32 0.00 81.00 143.51 28.56 25.29 86.86 0.00 0.00 0.00 66.35 51.01 18.78 77 ER17a ExonRegion 0 55.79 8.04 33.79 39.78 66.89 37.51 44.64 56.13 101.25 25.26 22.41 10.10 53.60 146.02 25.21 17.48 61.77 0.00 0.00 0.00 53.78 54.72 28.25 78 E17_Da NovelBoundary 0 2.89 0.00 0.00 20.71 0.00 0.00 4.37 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 79 E17a_E18a KnownJunction 0 57.12 8.02 32.44 40.29 82.17 59.68 51.94 41.28 93.69 21.09 28.11 5.85 74.51 123.14 31.15 19.57 69.47 0.00 0.00 0.00 40.03 67.11 39.86 80 ER18a ExonRegion 0 68.72 16.81 53.77 57.22 110.64 39.56 50.61 67.59 121.23 28.39 22.44 15.06 73.66 119.68 39.14 12.22 63.59 0.30 2.06 0.92 29.14 66.66 17.40 81 E18_Da KnownBoundary 0 88.39 31.24 62.89 49.24 84.04 15.67 42.44 92.83 114.41 31.08 14.79 18.16 52.11 142.03 79.61 3.50 51.61 0.00 0.00 0.00 45.34 53.40 18.52 82 ER18b ExonRegion 0 53.28 18.42 57.06 62.35 104.83 24.07 39.41 80.02 97.74 24.72 8.14 13.54 52.72 58.01 31.77 4.07 20.15 0.05 0.23 0.93 8.66 54.60 9.47