Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC093818.2 Gene 0 23.29 6.70 2.93 2.71 10.20 4.89 4.11 2.68 2.92 1.78 8.87 11.36 5.02 5.13 6.33 2.85 6.47 1.26 0.53 4.17 1.10 3.86 2.57 2 450443 Transcript 0 18.18 6.68 2.47 3.22 9.92 4.21 3.30 2.36 2.57 1.72 5.52 15.04 4.29 4.44 1.16 3.48 5.69 0.71 0.08 3.44 0.00 2.97 1.73 3 442417 Transcript 0 12.84 2.17 1.26 0.61 7.04 1.13 4.93 1.55 3.43 0.24 16.21 18.70 2.04 6.90 8.25 5.86 8.37 1.68 0.22 1.64 1.14 4.38 2.46 4 444919 Transcript 0 1.70 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 2.65 2.90 4.04 0.36 2.28 0.00 0.00 0.00 0.00 0.00 1.76 0.00 0.00 5 436922 Transcript 0 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 6 416080 Transcript 0 5.86 0.88 0.42 0.41 0.83 0.79 1.08 0.40 0.51 0.08 0.77 3.12 5.95 2.67 4.54 1.00 1.71 0.56 0.76 1.55 1.30 1.00 1.69 7 ER1a ExonRegion 0 2.43 0.00 0.00 0.00 3.78 0.00 0.04 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.03 0.00 0.00 0.00 0.00 0.00 2.20 8 E1_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 1.95 0.00 0.00 0.00 0.00 0.00 7.85 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 8.61 0.00 0.00 0.00 0.13 4.64 0.58 0.00 1.49 0.27 12.43 0.00 0.00 2.62 4.68 6.88 7.42 0.00 0.00 0.00 0.00 0.00 2.31 10 E1_Ac KnownBoundary 0 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 4.47 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ad KnownBoundary 0 10.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 0 12.70 0.00 0.00 0.00 0.00 0.00 1.32 0.00 1.24 2.29 11.60 0.00 0.00 3.25 0.00 2.97 3.30 0.00 0.00 0.00 0.00 0.00 5.87 13 ER1d ExonRegion 0 3.97 0.53 0.42 0.00 0.96 0.59 0.83 0.00 0.76 1.69 9.64 1.99 0.00 4.40 5.11 2.30 4.53 0.44 0.00 0.00 0.02 0.69 0.99 14 E1_Da NovelBoundary 0 14.67 2.70 0.00 0.00 4.33 21.69 11.84 0.00 1.77 1.67 4.90 0.00 0.00 7.06 4.45 11.96 4.02 4.23 0.00 5.94 30.39 6.06 0.00 15 E1a_E2a KnownJunction 0 3.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1a_E4a KnownJunction 0 13.04 3.29 2.84 0.00 12.48 0.00 0.00 0.00 3.12 2.69 24.27 6.30 0.00 12.48 0.00 8.03 7.95 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 9.37 6.15 0.00 2.47 8.90 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 19 ER2a ExonRegion 0 0.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 20 E3_Aa NovelBoundary 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.50 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3a ExonRegion 0 3.40 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 2.82 5.80 8.08 0.73 4.57 0.00 0.00 0.00 0.00 0.00 3.52 0.00 0.00 22 E3_Da NovelBoundary 0 10.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.89 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 12.46 2.03 2.45 0.00 10.70 0.82 0.59 0.00 2.47 3.44 26.42 5.29 0.00 11.01 0.97 2.97 15.04 0.62 0.00 0.00 0.00 3.94 0.00 24 ER4b ExonRegion 0 32.35 1.64 3.35 2.63 10.69 4.21 3.36 0.75 4.66 3.94 32.27 18.11 4.48 13.89 6.30 6.47 26.14 0.86 0.92 1.17 1.92 2.78 0.85 25 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E4a_E7a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 1.19 1.18 9.79 23.11 6.66 9.30 0.00 8.72 7.85 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E8a KnownJunction 0 14.97 3.35 0.00 0.00 10.87 0.00 13.29 0.00 2.58 0.00 19.79 31.21 6.49 9.83 0.00 0.00 11.87 0.00 0.00 0.00 0.00 6.12 0.00 28 ER5a ExonRegion 0 9.24 0.00 1.32 0.49 1.29 0.00 0.00 0.62 1.32 0.00 0.47 1.72 3.73 1.25 0.99 0.00 2.39 0.67 0.00 0.51 0.53 0.00 0.00 29 E5_Da NovelBoundary 0 30.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 6.82 0.00 0.00 0.00 4.30 0.00 0.00 3.26 0.00 0.00 0.00 30 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E6_Aa NovelBoundary 0 148.25 88.60 62.39 77.31 131.75 96.71 141.45 100.92 74.77 87.30 45.33 32.11 40.74 21.01 33.38 119.46 82.94 87.18 78.40 120.48 42.63 55.29 96.37 32 ER6a ExonRegion 0 14.20 3.51 0.35 1.17 2.04 3.15 4.33 0.99 0.72 0.33 2.59 10.76 20.05 9.44 17.18 3.99 4.43 1.58 3.05 5.70 4.66 3.99 6.76 33 E6_Da NovelBoundary 0 20.45 3.16 11.47 6.19 0.00 11.13 0.00 6.33 2.95 2.20 11.74 0.00 5.68 2.88 10.51 4.10 13.46 3.40 7.72 5.56 5.37 3.00 3.50 34 I6 Intron 0 10.84 0.53 0.44 0.92 0.89 0.04 1.17 0.55 1.01 0.49 3.78 3.88 2.81 2.03 2.30 1.98 5.51 0.22 0.00 0.15 0.47 0.00 0.84 35 I6_SR1 SilentIntronRegion 0 11.18 0.56 0.46 0.96 0.93 0.05 1.22 0.58 1.04 0.51 3.71 4.06 2.75 2.02 2.36 2.07 5.35 0.23 0.00 0.16 0.49 0.00 0.81 36 I6_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.65 0.00 1.93 0.00 23.45 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E7_Aa NovelBoundary 0 183.07 182.47 113.72 72.52 236.42 99.43 65.76 70.98 114.58 28.34 2.32 18.91 0.00 4.71 0.00 0.00 0.00 38.72 4.80 82.01 8.77 179.90 77.85 38 ER7a ExonRegion 0 52.12 20.04 7.41 7.58 25.97 12.62 9.87 7.09 5.46 3.98 6.77 22.02 6.22 4.01 3.48 1.72 5.18 2.14 0.23 10.33 0.00 8.91 2.98 39 E7_Da NovelBoundary 0 38.30 24.07 8.31 11.15 23.94 2.33 9.76 4.19 7.18 5.91 5.37 12.90 0.00 0.00 0.00 8.72 8.79 2.07 0.00 9.33 0.00 2.51 0.00 40 ER8a ExonRegion 0 19.75 2.49 1.96 0.73 6.05 1.90 3.44 1.85 5.47 0.00 28.72 24.42 1.68 15.33 16.94 9.48 19.71 2.25 0.00 2.37 3.96 5.38 7.38 41 E8_Da NovelBoundary 0 3.56 0.00 1.51 0.00 4.33 5.68 5.61 0.00 2.49 0.00 20.85 18.91 6.17 7.18 0.00 3.76 13.00 8.25 0.00 0.00 0.00 0.00 12.63 42 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 9.69 12.60 0.00 0.00 4.45 10.51 0.00 2.20 0.00 0.00 0.00 2.63 0.00 43 Ix Intron 0 13.01 1.44 0.73 0.69 6.83 1.18 2.60 0.71 1.19 0.68 8.56 13.11 5.59 7.11 4.44 1.92 6.70 0.45 0.29 1.64 0.61 1.15 1.35 44 Ix_SR1 SilentIntronRegion 0 9.75 1.25 0.53 0.60 5.52 0.81 2.61 0.60 1.10 0.53 7.41 13.16 6.21 6.92 3.55 1.68 5.88 0.36 0.34 1.16 0.37 0.88 1.24 45 Ix_AR1 ActiveIntronRegion 0 36.49 2.77 2.20 1.34 16.29 3.86 2.62 1.55 1.83 1.77 16.83 12.92 1.18 8.50 10.88 3.62 12.59 1.16 0.00 5.04 2.30 3.14 2.21 46 Ix Intron 0 3.48 0.00 0.00 0.00 5.87 2.01 0.00 0.00 0.00 0.00 11.66 5.87 0.00 4.82 5.62 0.00 1.81 0.00 0.00 0.00 0.00 3.43 1.61 47 Ix_AR1 ActiveIntronRegion 0 3.56 0.00 0.00 0.00 6.00 2.06 0.00 0.00 0.00 0.00 11.92 5.99 0.00 4.93 5.74 0.00 1.85 0.00 0.00 0.00 0.00 3.46 1.65 48 E9_Aa NovelBoundary 0 20.00 6.51 3.25 3.63 6.88 2.90 8.13 1.73 8.25 1.45 6.84 0.00 0.00 5.06 4.45 3.25 0.00 0.00 0.00 8.88 0.00 0.00 8.45 49 ER9a ExonRegion 0 16.63 2.85 3.07 1.71 11.25 2.63 2.98 4.33 3.88 0.96 6.65 6.57 0.00 2.43 11.61 3.43 1.90 2.27 0.89 4.17 0.62 3.37 2.47