Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIF5C Gene 0 78.20 626.87 419.74 528.59 486.15 1129.29 526.66 622.67 954.23 543.72 2.69 3.57 4.56 2.79 0.63 0.39 44.85 466.37 335.47 819.88 5.50 7.74 4.60 2 451033 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 414838 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 435030 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 334436 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 450621 Transcript 0 0.00 1.10 1.34 2.21 2.40 6.66 12.14 0.48 0.71 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.29 4.08 3.85 0.00 0.00 0.00 7 464066 Transcript 0 0.52 12.88 6.99 9.93 6.10 8.37 10.29 7.10 16.28 13.31 0.12 0.22 0.00 0.89 0.00 0.00 1.84 18.06 6.64 19.76 0.14 0.77 0.18 8 397413 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 460377 Transcript 0 17.08 52.06 53.13 62.95 27.54 28.05 55.83 54.90 38.04 42.23 0.00 0.46 0.00 0.21 0.00 0.31 4.07 48.44 39.84 27.49 0.17 0.25 0.15 10 482151 Transcript 0 11.27 85.33 60.96 65.92 47.34 53.45 110.84 79.92 56.00 64.47 1.03 0.37 0.40 0.01 0.00 0.00 13.14 81.60 86.72 69.59 0.46 1.21 0.31 11 ER1a ExonRegion 0 3.03 29.83 22.72 20.24 19.22 82.43 35.64 54.41 126.20 71.39 0.00 0.32 0.00 0.42 0.00 0.11 12.60 155.52 61.75 206.35 0.00 1.87 0.91 12 E1a_E2a KnownJunction 0 10.08 164.71 132.05 122.60 147.71 242.08 183.28 270.19 614.29 291.29 0.00 0.00 6.01 0.00 0.00 4.19 61.80 551.25 172.62 880.84 0.00 3.12 0.00 13 Ix_SR2 SilentIntronRegion 0 33.34 27.23 13.51 29.27 70.16 68.90 189.94 11.41 94.20 4.52 10.10 22.43 18.98 10.61 21.91 19.33 11.16 5.02 67.97 15.81 3.04 0.63 5.65 14 ER2a ExonRegion 0 9.77 196.56 147.25 141.10 113.32 254.11 192.76 307.23 775.00 360.23 0.91 0.10 3.71 3.93 0.00 2.32 59.42 757.44 288.26 1105.30 1.24 5.31 8.16 15 E2a_E3a KnownJunction 0 31.26 358.03 215.81 226.01 193.46 381.09 315.01 448.08 1091.25 485.91 4.95 0.00 8.28 2.41 0.00 3.76 73.12 907.66 404.81 1500.46 0.00 17.02 7.34 16 ER3a ExonRegion 0 32.06 291.60 197.47 228.38 154.11 539.16 287.85 387.78 980.10 415.10 4.21 4.45 3.99 1.49 0.00 0.60 74.67 836.58 381.43 1282.03 0.89 7.71 3.89 17 E3a_E4a KnownJunction 0 35.93 267.06 175.22 242.39 178.01 642.19 289.27 340.91 875.31 392.40 2.58 0.00 0.00 0.00 0.00 0.00 54.23 807.39 256.67 1250.48 3.15 3.12 8.37 18 ER4a ExonRegion 0 30.30 272.98 221.34 245.96 238.12 709.16 389.62 420.24 963.47 440.31 4.84 3.83 1.88 3.25 0.00 2.07 60.42 881.97 378.85 1385.59 1.49 3.77 10.57 19 E4a_E5a KnownJunction 0 51.64 289.29 251.11 324.57 391.34 974.04 626.36 507.18 1071.52 512.74 10.32 0.00 13.64 0.00 0.00 4.36 102.66 728.21 592.21 1765.20 0.00 2.63 11.52 20 ER5a ExonRegion 0 38.05 302.63 288.91 355.91 325.08 866.98 504.81 465.31 1114.55 517.96 4.77 0.00 10.15 0.00 4.14 1.64 104.89 704.33 465.58 1570.16 2.20 8.08 6.77 21 E5a_E6a KnownJunction 0 40.16 359.74 279.41 327.10 342.53 955.47 539.49 378.58 1028.52 449.96 2.68 0.00 26.13 0.00 4.82 0.00 128.28 603.02 434.18 1549.99 6.30 5.51 4.35 22 ER6a ExonRegion 0 38.06 344.51 271.53 307.40 290.08 810.77 527.74 429.09 1050.02 475.82 3.87 0.00 8.71 1.04 0.41 0.00 82.64 553.83 349.82 1280.81 2.09 2.16 5.66 23 E6a_E7a KnownJunction 0 64.46 406.77 270.36 289.61 301.19 976.77 571.33 425.03 933.70 440.03 9.74 0.00 0.00 0.00 0.00 0.00 75.55 654.96 347.59 1171.92 0.00 0.00 11.10 24 ER7a ExonRegion 0 39.49 375.22 245.09 266.80 200.74 733.54 392.34 427.34 984.20 507.51 1.43 0.00 8.31 0.54 0.00 0.00 97.45 418.85 373.23 1253.04 0.88 6.82 6.14 25 E7a_E8a KnownJunction 0 68.90 539.77 229.92 322.04 292.36 750.76 405.19 505.05 1107.89 604.42 0.00 0.00 22.24 0.00 0.00 0.00 88.17 598.50 431.73 1542.58 2.72 11.45 3.67 26 ER8a ExonRegion 0 57.32 401.23 283.13 360.61 383.49 979.63 613.92 516.31 1095.15 602.97 5.44 4.40 14.18 1.16 1.81 2.43 94.80 777.55 519.47 1239.54 0.92 4.58 8.43 27 E8a_E11a KnownJunction 0 84.09 486.29 316.34 311.22 491.94 1399.42 702.81 613.03 1237.89 706.04 4.69 0.00 0.00 4.89 0.00 0.00 82.94 1148.80 643.03 1385.02 2.78 2.33 12.04 28 ER9a ExonRegion 0 0.00 2.19 2.68 4.41 4.81 13.31 24.29 0.96 1.42 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.59 8.17 7.70 0.00 0.00 0.00 29 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.75 2.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER10b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.97 3.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER11a ExonRegion 0 53.42 405.48 386.28 425.64 402.43 1201.91 620.58 594.93 1253.10 651.02 7.36 6.72 19.12 2.95 0.00 0.00 110.94 1178.58 706.21 1450.84 0.29 11.39 3.89 34 E11a_E12a KnownJunction 0 76.01 530.04 530.94 622.40 442.36 1133.55 613.64 631.31 1351.98 705.31 2.26 5.55 6.17 4.65 0.00 0.00 137.07 1068.75 832.21 1832.31 0.00 11.76 0.00 35 ER12a ExonRegion 0 53.57 333.77 399.82 433.15 351.73 950.29 514.16 549.09 1156.07 578.91 0.82 5.78 13.25 4.74 0.00 1.02 101.95 1075.69 574.33 1536.91 2.26 9.55 6.07 36 E12a_E13a KnownJunction 0 77.50 377.24 412.61 506.40 446.52 1176.03 698.61 641.17 1187.75 569.63 0.00 6.30 14.93 2.47 0.00 0.00 136.70 992.60 651.97 1465.24 0.00 21.74 0.00 37 ER13a ExonRegion 0 72.21 482.93 411.03 507.64 473.07 1424.26 774.92 646.89 1227.69 649.00 0.55 7.63 13.42 4.38 0.19 0.00 127.04 856.59 650.08 1632.36 2.06 12.35 4.74 38 E13_Da KnownBoundary 0 74.46 538.00 390.88 519.31 731.75 1746.38 1120.41 703.06 1390.00 715.47 2.58 0.00 6.82 4.83 4.70 0.00 146.05 968.81 751.65 1796.65 0.00 11.39 4.10 39 ER13b ExonRegion 0 63.60 394.92 352.48 461.20 516.75 1359.26 753.63 702.27 1330.43 665.23 0.97 1.95 15.48 5.32 3.70 0.00 136.41 1125.60 545.57 1647.02 0.00 8.96 4.40 40 E13b_E14a KnownJunction 0 78.98 395.00 365.98 481.56 407.73 1212.65 591.43 753.01 1356.35 670.74 0.00 12.00 6.82 7.06 4.45 0.00 101.92 1165.01 482.56 1686.33 0.00 11.63 4.10 41 ER14a ExonRegion 0 46.77 457.39 356.78 453.31 350.04 1022.90 496.80 657.28 1270.73 654.73 3.67 3.74 9.38 5.73 0.33 0.00 109.27 1056.40 642.88 1508.54 1.92 10.88 5.09 42 E14a_E15a KnownJunction 0 56.82 649.88 363.71 335.62 463.84 1378.52 574.29 635.91 1202.62 645.71 7.79 12.30 6.82 9.65 0.00 0.00 68.91 1138.35 544.30 1606.49 0.00 5.39 4.18 43 E15_Ab NovelBoundary 0 17.71 253.77 170.22 165.38 125.64 568.93 225.63 291.13 596.98 315.87 0.00 0.00 0.00 4.24 0.00 0.00 33.01 556.64 232.67 573.08 0.00 2.51 0.00 44 ER15a ExonRegion 0 45.15 578.89 335.48 320.28 389.17 1280.20 505.75 607.46 1175.55 617.54 3.87 8.66 9.38 8.84 0.97 0.00 78.49 1216.44 556.73 1461.22 0.00 4.17 2.94 45 ER15b ExonRegion 0 40.78 517.07 342.10 387.97 449.70 1333.78 630.43 562.87 1178.59 588.00 4.90 4.19 7.89 7.53 1.60 0.00 87.86 1274.15 558.45 1355.28 2.13 6.60 4.16 46 E15a_E16a KnownJunction 0 57.49 574.83 387.86 545.88 675.72 1700.21 970.08 585.22 1262.28 635.12 1.95 5.55 5.84 6.95 0.00 0.00 48.34 1317.64 761.15 1511.58 2.66 9.00 4.35 47 ER16a ExonRegion 0 47.66 448.31 400.28 484.76 376.14 1189.36 597.38 647.31 1301.74 644.54 2.43 2.91 8.16 8.06 1.51 0.73 97.38 1151.55 628.04 1485.21 2.66 10.31 4.30 48 E16a_E17a KnownJunction 0 91.50 569.11 334.58 510.32 356.45 1131.00 529.64 711.94 1316.19 611.06 5.00 6.15 5.84 7.30 0.00 0.00 94.53 1184.82 704.87 1564.63 0.00 13.96 7.85 49 ER17a ExonRegion 0 46.52 510.93 306.20 370.07 324.04 1227.32 548.53 581.70 1145.79 595.89 3.12 3.86 8.71 3.97 1.97 1.86 79.72 1043.46 523.81 1319.22 2.31 8.22 3.76 50 E17a_E18a KnownJunction 0 58.90 420.19 262.03 346.41 344.40 1046.84 560.69 540.86 1033.47 600.31 2.16 6.30 20.13 4.47 4.45 0.00 86.96 1009.97 597.57 1280.96 5.87 9.37 0.00 51 ER18a ExonRegion 0 29.09 374.09 235.20 277.29 190.13 793.95 336.49 435.23 931.11 485.28 4.38 3.48 8.26 5.04 0.91 0.16 67.64 915.80 462.60 1043.66 2.74 4.00 3.78 52 E18a_E19a KnownJunction 0 28.97 408.94 223.62 258.91 259.00 1096.98 447.99 441.92 963.42 476.88 1.95 18.61 0.00 7.12 0.00 0.00 73.40 868.28 401.24 1107.68 2.84 3.12 3.16 53 ER19a ExonRegion 0 37.00 438.46 262.24 275.96 333.38 1264.42 567.31 456.55 950.55 499.15 4.08 7.41 3.38 5.08 0.39 0.00 70.52 882.63 477.45 1100.14 0.28 6.14 5.08 54 E19a_E20a KnownJunction 0 62.01 530.69 343.10 323.27 448.73 1134.06 521.43 575.57 1101.03 590.16 1.95 6.30 6.33 4.89 5.81 0.00 55.17 1073.06 476.06 1132.36 0.00 11.27 8.02 55 ER20a ExonRegion 0 48.27 487.58 325.89 327.41 370.92 1012.95 447.77 599.28 1075.82 594.89 4.12 8.21 5.66 4.09 2.68 1.35 83.64 1076.61 544.82 1317.96 1.46 3.30 4.88 56 E20_Da KnownBoundary 0 8.59 37.69 20.87 29.43 3.90 21.41 32.77 46.62 19.82 32.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.35 25.51 13.17 0.00 0.00 0.00 57 E20a_E20b KnownJunction 0 38.53 465.71 291.71 342.45 332.85 900.67 374.32 635.91 1085.72 601.17 7.21 5.85 0.00 2.12 0.00 4.02 71.44 1028.38 525.47 1465.11 0.00 5.76 4.35 58 ER20b ExonRegion 0 5.47 22.85 13.79 25.02 13.68 17.57 27.05 32.00 16.09 26.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.99 19.42 19.92 0.00 0.00 0.00 59 E20_Db KnownBoundary 0 6.89 24.01 23.59 27.47 15.70 9.37 36.13 28.92 8.59 26.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.04 35.95 17.90 0.00 0.00 0.00 60 ER20c ExonRegion 0 11.40 59.55 39.87 57.92 29.55 20.52 48.01 38.70 31.09 37.03 0.01 0.37 0.01 0.00 0.00 0.16 2.13 25.80 28.77 19.39 0.34 0.01 0.31 61 E20_Ab KnownBoundary 0 13.48 54.86 73.86 64.63 6.96 15.45 22.61 22.22 30.61 34.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.28 4.05 10.99 0.00 0.00 0.00 62 ER20d ExonRegion 0 53.63 501.79 329.68 383.67 325.09 993.41 448.31 592.91 1107.27 613.18 6.10 7.98 2.07 2.80 1.12 1.80 80.22 960.30 427.25 1214.81 0.00 8.70 0.81 63 E20_Dc KnownBoundary 0 36.67 61.37 101.50 93.10 47.54 36.63 117.83 101.78 59.92 72.34 0.00 0.00 0.00 0.00 0.00 0.00 8.98 95.55 20.14 60.91 0.00 3.12 0.00 64 E20c_E21b KnownJunction 0 26.89 558.32 321.84 397.92 379.29 1382.33 539.18 655.09 1302.19 641.89 9.27 0.00 0.00 4.59 0.00 0.00 83.31 812.65 442.55 1367.19 0.00 5.63 0.00 65 ER20e ExonRegion 0 22.76 44.56 66.39 67.98 25.54 35.58 63.66 71.10 44.99 47.42 0.00 0.56 0.00 0.42 0.00 0.46 6.02 71.08 50.91 35.58 0.00 0.49 0.00 66 I20 Intron 0 9.73 51.17 64.11 76.11 40.00 46.64 69.76 83.63 57.02 63.93 0.39 0.72 0.78 0.18 0.14 0.20 7.59 87.92 106.43 62.90 0.60 1.41 0.99 67 I20_SR1 SilentIntronRegion 0 9.75 51.23 64.19 76.20 40.05 46.70 69.84 83.74 57.10 64.01 0.39 0.72 0.78 0.18 0.14 0.20 7.60 88.04 106.57 62.98 0.60 1.41 0.99 68 E21_Aa NovelBoundary 0 3.04 74.99 60.70 108.91 95.50 98.18 200.23 74.51 39.06 60.17 0.00 0.00 0.00 0.00 0.00 0.00 16.27 92.77 113.13 67.69 0.00 0.00 0.00 69 ER21a ExonRegion 0 11.27 85.33 60.96 65.92 47.34 53.45 110.84 79.92 56.00 64.47 1.03 0.37 0.40 0.01 0.00 0.00 13.14 81.60 86.72 69.59 0.46 1.21 0.31 70 E21_Ab KnownBoundary 0 14.60 92.75 72.62 89.70 55.09 98.52 175.15 98.78 59.03 70.57 0.00 0.00 0.00 0.00 0.00 0.00 13.28 47.26 50.35 90.76 0.00 3.06 0.00 71 ER21b ExonRegion 0 43.50 552.97 374.10 467.48 480.02 1449.48 688.94 790.45 1352.54 798.87 5.40 14.66 5.67 4.23 1.03 1.50 93.31 1081.28 724.18 1464.60 25.05 9.84 10.06 72 E21a_E22a KnownJunction 0 27.78 610.55 361.13 454.75 488.96 1440.53 601.76 757.41 1293.97 732.79 4.95 12.60 6.82 7.36 0.00 0.00 139.13 1015.57 684.73 1573.45 3.15 11.33 3.59 73 ER22a ExonRegion 0 22.52 441.95 281.25 358.97 346.00 1117.44 440.05 593.26 1141.41 639.73 4.85 7.74 6.54 2.72 2.00 0.00 77.38 885.25 492.27 1190.86 12.54 7.24 0.91 74 E22a_E23a KnownJunction 0 31.49 418.35 251.32 343.88 295.08 859.33 449.22 605.72 1141.63 640.68 4.95 12.30 12.01 0.00 0.00 0.00 39.27 876.28 370.27 1148.27 31.07 14.39 3.33 75 ER23a ExonRegion 0 21.14 431.80 252.03 289.39 251.67 855.77 324.17 566.50 1053.48 598.75 3.33 8.36 6.45 1.35 0.00 0.00 71.15 958.67 441.53 999.73 32.60 7.93 9.22 76 E23a_E24a KnownJunction 0 51.64 476.17 286.54 261.80 298.64 993.06 381.61 598.12 1061.01 599.67 7.11 18.16 0.00 2.12 0.00 0.00 108.65 913.26 523.40 1122.96 15.26 2.82 4.01 77 ER24a ExonRegion 0 35.60 437.28 189.50 237.82 209.96 875.12 339.93 503.28 965.57 555.63 3.79 5.69 0.00 1.79 0.99 0.00 69.35 963.93 393.71 1023.44 10.66 5.71 4.22 78 E24a_E25a KnownJunction 0 47.64 583.12 220.31 245.32 182.94 882.22 367.26 469.39 891.83 476.02 0.00 6.15 0.00 0.00 0.00 0.00 51.33 993.14 343.16 1047.16 8.03 12.12 4.35 79 ER25a ExonRegion 0 26.26 451.40 211.94 255.22 165.48 836.75 296.18 468.47 875.64 497.39 1.59 1.48 1.99 2.15 0.82 0.00 56.12 940.81 381.94 1006.97 16.93 8.08 6.31 80 E25a_E26a KnownJunction 0 47.49 484.72 353.68 544.99 211.71 828.61 323.09 780.04 1277.39 777.95 4.58 0.00 8.28 4.71 5.19 0.00 73.49 1109.17 841.06 1263.51 30.58 24.00 12.21 81 ER26a ExonRegion 0 39.84 470.26 289.54 376.53 217.13 928.38 361.53 631.40 1179.13 694.37 7.36 0.00 1.65 1.80 0.43 0.00 74.68 809.57 331.39 1035.27 24.65 8.04 6.08 82 E26_Da NovelBoundary 0 0.00 8.16 17.56 14.42 23.09 34.18 48.89 27.77 29.22 25.38 0.00 0.00 0.00 0.00 0.00 0.00 18.42 68.90 46.68 99.20 2.78 0.00 0.00 83 E26a_E27a KnownJunction 0 0.00 0.00 0.00 2.86 0.00 0.00 0.00 0.00 17.07 7.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 84 E26a_E28a KnownJunction 0 45.64 695.14 451.76 707.90 388.20 1412.65 557.69 1060.16 1846.74 1001.09 5.11 0.00 13.47 2.12 0.00 0.00 93.50 1190.33 353.33 1040.06 15.32 8.94 7.51 85 ER27a ExonRegion 0 2.09 51.51 21.60 34.81 24.39 31.71 36.41 23.83 46.65 43.74 0.48 0.88 0.00 1.43 0.00 0.00 7.35 67.80 26.56 79.05 0.54 3.08 0.72 86 E27a_E28a KnownJunction 0 0.00 0.00 6.36 2.06 0.00 0.00 1.94 4.56 1.42 1.67 0.00 0.00 0.00 2.12 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 87 ER28a ExonRegion 0 55.44 1127.38 329.72 484.85 418.65 1166.78 541.23 718.47 1317.79 767.27 6.59 5.71 5.30 5.09 1.01 0.00 75.96 744.05 540.38 1107.26 22.24 13.28 14.69 88 E28_Da KnownBoundary 0 106.61 2080.75 453.56 678.24 677.25 1353.20 822.75 920.31 1581.18 848.73 16.90 6.30 6.82 12.48 0.00 0.00 45.54 555.97 431.35 1145.40 18.97 5.63 11.87 89 ER28b ExonRegion 0 171.29 1227.80 861.16 1096.34 1041.25 2174.10 971.07 1167.96 1558.02 912.85 3.46 5.21 5.94 3.87 0.90 0.42 39.38 365.68 417.54 1031.49 7.31 12.96 6.14