Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC017048.1 Gene 0 38.68 110.68 32.94 45.90 43.20 29.66 54.25 65.67 9.13 29.18 0.58 1.54 1.55 1.06 2.04 0.59 0.55 1.22 33.72 29.46 7.12 15.67 1.66 2 295549 Transcript 0 35.24 98.37 38.31 52.79 46.26 30.21 60.70 70.75 9.41 34.43 0.19 0.20 0.00 0.12 0.21 0.00 0.00 0.31 34.08 33.77 6.12 15.77 0.31 3 339037 Transcript 0 3.81 4.21 0.99 2.18 3.09 0.91 4.44 0.47 0.25 0.77 0.35 0.97 0.52 0.43 1.69 0.81 0.75 0.83 2.46 2.82 0.70 1.76 0.53 4 ER1a ExonRegion 0 13.07 49.85 10.07 10.57 10.17 14.57 15.44 12.35 0.88 9.86 0.27 0.00 0.00 0.37 0.00 0.00 0.00 0.49 10.26 10.59 3.82 1.91 0.00 5 E1_Ab KnownBoundary 0 136.39 374.80 42.49 67.36 82.94 110.96 127.37 63.42 11.72 26.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.06 42.92 64.17 11.86 27.19 0.00 6 ER1b ExonRegion 0 60.57 152.48 45.42 62.80 37.22 48.08 54.36 73.65 11.73 35.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.98 39.98 41.43 13.51 20.61 1.50 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E3a KnownJunction 0 36.82 91.89 53.19 67.19 40.41 33.56 65.71 78.53 13.34 40.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.37 55.29 9.39 23.70 0.00 9 I1 Intron 0 6.01 41.82 6.39 20.07 7.45 4.16 15.85 13.06 2.01 9.93 0.14 0.00 0.00 0.00 0.06 0.08 0.00 0.36 5.04 8.25 0.89 1.98 0.12 10 I1_SR1 SilentIntronRegion 0 6.02 41.84 6.39 20.08 7.46 4.16 15.85 13.06 2.01 9.94 0.14 0.00 0.00 0.00 0.06 0.08 0.00 0.36 5.04 8.25 0.90 1.98 0.12 11 E2_Aa NovelBoundary 0 21.41 28.68 15.88 20.41 12.99 2.90 45.40 15.40 1.77 6.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.52 5.62 0.00 0.00 12 ER2a ExonRegion 0 8.53 9.42 1.71 2.53 4.94 2.73 6.56 1.42 0.75 2.31 1.05 2.90 1.57 1.29 5.08 2.42 2.24 2.50 3.70 5.70 2.09 2.45 1.59 13 E2_Da NovelBoundary 0 18.37 35.26 14.07 54.07 7.30 7.89 13.47 37.30 4.69 15.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.51 0.00 0.00 0.00 14 E2a_E3a KnownJunction 0 2.89 3.22 1.24 4.00 0.00 0.00 6.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.67 2.75 0.00 2.82 0.00 15 I2 Intron 0 19.87 65.53 12.86 30.77 13.13 9.78 19.21 21.99 3.93 14.95 0.00 0.00 0.00 0.00 0.44 0.00 0.00 0.00 6.80 6.36 0.47 0.44 0.00 16 I2_SR1 SilentIntronRegion 0 20.04 66.07 12.97 31.02 13.24 9.87 19.37 22.17 3.96 15.08 0.00 0.00 0.00 0.00 0.44 0.00 0.00 0.00 6.85 6.41 0.47 0.45 0.00 17 E3_Aa NovelBoundary 0 7.19 66.17 19.34 46.01 18.76 18.46 35.11 33.89 6.37 13.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.99 26.91 0.00 0.00 4.10 18 ER3a ExonRegion 0 37.69 152.37 61.04 98.83 58.23 43.14 63.91 108.86 18.43 51.96 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 83.26 73.44 16.35 40.53 2.18 19 E3_Da NovelBoundary 0 3.33 49.40 35.57 71.62 11.88 4.54 28.57 35.24 2.60 24.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.63 0.00 0.00 0.00 20 E3a_E4a KnownJunction 0 39.27 142.28 52.13 69.82 101.78 78.14 90.31 101.82 16.41 27.56 1.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.17 54.07 17.54 45.50 4.18 21 I3 Intron 0 8.60 45.71 7.50 24.64 9.21 7.57 15.69 13.52 1.94 11.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 6.86 0.80 0.81 0.19 22 I3_SR1 SilentIntronRegion 0 8.61 45.73 7.50 24.65 9.21 7.58 15.70 13.52 1.94 11.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 6.87 0.81 0.81 0.19 23 E4_Aa NovelBoundary 0 6.74 31.84 12.39 35.19 10.78 18.97 13.38 12.98 4.31 8.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 0.00 0.00 24 ER4a ExonRegion 0 87.71 254.88 71.22 88.76 84.94 61.16 114.74 143.94 22.16 54.34 0.78 4.04 6.67 3.75 3.73 0.00 0.00 1.92 73.04 61.89 15.52 35.44 4.83 25 E4_Da KnownBoundary 0 105.06 247.39 93.99 144.44 82.26 88.30 135.62 187.54 17.53 89.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.68 75.61 3.15 35.70 0.00 26 ER4b ExonRegion 0 55.82 153.38 51.66 80.61 88.20 42.52 100.93 121.36 14.01 53.16 0.30 0.59 0.00 0.00 0.64 0.00 0.00 0.43 46.61 35.44 5.15 21.70 0.92 27 IG24_AR7 ActiveIntergenicRegion 0 9.68 18.89 18.92 23.21 14.35 3.98 13.54 35.57 3.63 16.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.96 10.84 0.87 4.51 0.00 28 IG24_AR5 ActiveIntergenicRegion 0 2.59 16.24 1.00 8.11 7.06 5.42 5.09 5.75 0.95 6.70 0.39 0.00 0.00 0.00 0.00 0.23 0.00 0.00 4.92 4.02 0.62 1.23 0.00 29 IG24_AR4 ActiveIntergenicRegion 0 2.19 23.85 1.69 14.18 19.55 0.68 10.20 5.39 0.85 7.48 0.89 0.00 0.00 0.00 0.00 1.23 0.54 0.00 3.10 6.50 0.87 0.00 0.00 30 IG24_SR2 SilentIntergenicRegion 0 10.59 54.04 4.99 23.84 24.16 5.42 12.56 21.15 3.01 14.32 0.13 0.24 0.00 0.06 0.00 0.04 0.12 0.12 4.14 6.48 1.01 1.84 0.00 31 IG24_AR3 ActiveIntergenicRegion 0 6.87 33.45 4.86 21.68 13.14 3.80 8.98 25.13 2.98 14.32 0.00 0.00 0.00 0.00 0.67 0.00 0.00 0.18 2.93 9.74 2.21 4.39 0.00 32 IG24_AR2 ActiveIntergenicRegion 0 4.23 44.23 3.68 17.04 30.77 4.36 12.41 19.45 1.24 13.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 3.72 2.20 2.34 0.00 33 IG24_AR1 ActiveIntergenicRegion 0 4.36 21.87 1.11 7.10 19.63 1.64 4.45 7.86 0.90 2.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.95 1.89 5.99 0.56 3.15 0.00