Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLA2R1 Gene 0 9.63 1.20 3.81 2.24 6.90 3.62 5.59 4.21 10.33 2.44 0.54 1.05 1.04 0.57 0.83 1.04 1.05 0.70 0.90 1.36 77.90 64.65 50.92 2 392771 Transcript 0 4.91 0.73 2.79 1.16 2.49 2.09 1.92 1.73 4.48 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.12 23.12 9.63 3 283243 Transcript 0 9.80 0.86 4.40 3.95 9.23 1.64 6.01 6.62 10.09 2.46 0.46 0.60 0.84 0.48 0.70 0.86 0.85 0.59 0.75 1.12 91.29 68.04 74.73 4 460710 Transcript 0 12.14 0.00 6.45 1.07 3.75 1.61 3.54 2.26 4.83 3.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.91 22.82 17.60 5 ER1a ExonRegion 0 0.00 0.00 0.29 0.00 0.43 0.30 2.26 0.02 1.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57.74 12.62 19.31 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.28 0.00 5.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.07 19.72 40.38 7 ER2a ExonRegion 0 2.97 0.00 3.56 0.77 1.07 0.73 3.17 2.07 11.62 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 133.88 64.82 59.34 8 E2a_E3a KnownJunction 0 3.78 0.00 1.66 1.40 0.00 0.00 2.12 4.93 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 154.20 47.95 58.99 9 ER3a ExonRegion 0 0.91 0.00 1.65 0.88 3.92 1.37 3.68 3.84 8.67 2.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 162.85 82.47 81.77 10 E3a_E4a KnownJunction 0 0.00 0.00 1.45 1.86 0.00 6.59 1.68 6.78 15.80 3.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 191.76 99.69 68.38 11 ER4a ExonRegion 0 4.61 0.00 3.11 3.31 3.92 1.82 5.74 6.82 14.67 2.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 164.85 91.72 86.24 12 E4a_E5a KnownJunction 0 3.63 0.00 4.08 5.73 3.90 0.00 1.81 4.07 12.33 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 132.33 68.34 58.30 13 ER5a ExonRegion 0 3.23 0.00 2.79 2.34 5.91 3.23 4.15 5.67 16.50 1.99 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.70 81.09 68.42 14 E5a_E6a KnownJunction 0 2.74 0.00 0.00 2.06 11.80 2.10 4.02 3.66 19.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 158.03 80.77 68.03 15 ER6a ExonRegion 0 0.84 0.72 5.15 3.15 6.30 3.90 9.06 4.66 19.44 0.76 0.00 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 136.65 78.39 88.12 16 E6a_E7a KnownJunction 0 0.00 0.00 4.97 3.53 7.72 0.00 6.36 10.72 12.88 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 145.98 111.51 105.25 17 ER7a ExonRegion 0 6.65 0.00 5.99 2.27 5.89 2.41 6.88 9.31 16.77 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 137.14 94.38 107.90 18 E7a_E8a KnownJunction 0 10.59 0.00 1.83 3.93 0.00 11.07 21.46 12.49 18.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 132.88 122.34 140.08 19 E7a_E9a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.57 0.00 20 ER8a ExonRegion 0 3.76 0.00 4.34 2.04 5.57 6.52 8.71 6.36 11.69 0.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 144.52 111.22 104.08 21 E8a_E9a KnownJunction 0 9.85 0.00 6.56 1.56 7.47 8.23 9.63 9.82 8.30 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 170.63 93.20 52.67 22 ER9a ExonRegion 0 6.07 0.00 5.93 3.94 12.78 2.06 8.64 4.02 9.92 2.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 152.41 106.03 98.78 23 E9a_E10a KnownJunction 0 10.52 0.00 3.55 0.00 12.22 0.00 14.49 2.22 15.60 6.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 144.81 81.01 116.35 24 ER10a ExonRegion 0 5.90 0.00 6.43 2.17 6.46 5.31 2.98 6.09 13.90 3.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 154.73 100.06 81.08 25 E10a_E11a KnownJunction 0 10.22 0.00 5.91 1.96 12.39 4.88 0.00 6.98 15.22 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 226.35 140.96 76.83 26 ER11a ExonRegion 0 7.53 1.22 5.15 1.15 8.92 2.48 6.59 5.48 10.10 2.77 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 182.09 107.69 91.69 27 E11a_E12a KnownJunction 0 6.67 0.00 8.72 3.66 3.48 0.00 3.93 5.05 6.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 157.35 55.78 65.56 28 ER12a ExonRegion 0 10.56 0.51 7.79 3.83 10.29 1.84 3.57 10.49 7.37 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 198.70 79.15 81.04 29 E12a_E13a KnownJunction 0 9.78 0.00 8.96 1.47 11.12 0.00 2.21 3.45 6.25 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.05 58.54 105.00 30 ER13a ExonRegion 0 7.35 0.00 4.88 3.40 8.01 1.92 3.27 8.01 10.52 4.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 120.55 90.40 76.33 31 E13a_E14a KnownJunction 0 13.34 0.00 0.00 2.06 22.33 0.00 2.25 8.54 12.36 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.07 101.04 93.73 32 ER14a ExonRegion 0 13.02 0.00 1.90 0.53 10.64 7.49 6.06 7.65 15.23 3.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 106.09 106.82 92.35 33 E14a_E15a KnownJunction 0 10.82 0.00 1.42 0.00 52.63 2.33 5.52 3.82 16.15 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105.70 120.57 68.38 34 ER15a ExonRegion 0 5.84 0.00 4.82 2.13 10.32 1.38 4.96 5.15 15.84 2.00 0.00 2.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 145.53 113.58 89.60 35 E15a_E16a KnownJunction 0 10.30 0.00 2.25 1.53 3.90 2.21 0.00 4.89 20.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 133.25 84.93 93.73 36 E15a_E17a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.78 14.51 4.35 37 ER16a ExonRegion 0 9.41 0.00 2.08 0.76 3.79 0.61 0.70 6.43 16.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.12 70.67 81.82 38 E16a_E17a KnownJunction 0 14.89 0.00 1.83 0.00 3.65 0.00 1.81 5.05 9.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 150.37 70.17 54.55 39 ER17a ExonRegion 0 6.23 0.66 4.45 3.70 12.14 3.39 6.11 3.13 14.92 1.48 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 170.82 80.06 108.51 40 E17a_E18a KnownJunction 0 17.19 0.00 0.00 3.40 11.46 5.22 11.08 1.64 10.88 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 175.45 83.16 67.27 41 ER18a ExonRegion 0 9.57 0.00 0.04 6.84 13.09 4.71 7.76 0.24 13.99 4.50 0.00 6.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 168.30 76.67 72.92 42 E18a_E19a KnownJunction 0 14.22 0.00 0.00 8.72 11.80 0.00 4.02 0.00 17.56 1.07 0.00 25.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 119.66 61.23 116.09 43 ER19a ExonRegion 0 12.70 0.00 2.97 4.46 5.71 4.69 2.69 1.26 14.48 5.21 0.00 2.83 1.89 0.00 0.00 0.00 0.00 0.00 0.00 1.04 111.24 99.37 101.48 44 E19a_E20a KnownJunction 0 16.45 0.00 5.74 10.29 15.96 14.37 0.00 0.00 8.59 6.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 93.16 119.47 92.62 45 ER20a ExonRegion 0 8.36 0.00 5.62 3.19 12.35 9.89 4.26 1.96 14.89 3.73 0.00 5.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 114.59 108.66 91.92 46 E20a_E21a KnownJunction 0 3.78 0.00 11.27 3.96 8.66 8.01 7.86 1.56 17.19 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 127.20 177.58 107.13 47 ER21a ExonRegion 0 11.17 0.00 5.60 1.12 3.70 4.72 5.85 4.25 15.17 3.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 157.70 115.86 65.15 48 E21a_E22a KnownJunction 0 6.22 0.00 6.00 0.00 3.99 16.47 5.92 1.56 19.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 141.53 135.57 72.47 49 ER22a ExonRegion 0 14.61 0.00 4.61 0.00 10.76 7.57 6.38 5.21 15.42 3.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.03 111.14 69.09 50 E22a_E23a KnownJunction 0 21.78 0.00 7.89 0.00 3.90 14.48 3.67 8.50 17.85 7.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.08 172.80 52.33 51 ER23a ExonRegion 0 15.37 0.63 2.67 0.99 7.41 7.32 4.04 6.35 14.87 4.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 58.43 139.43 63.55 52 E23a_E24a KnownJunction 0 3.78 0.00 1.83 2.06 14.43 5.45 2.25 6.78 17.91 7.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.66 154.37 72.22 53 ER24a ExonRegion 0 15.31 0.04 5.05 3.31 9.30 6.93 4.41 5.37 13.31 8.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 178.72 126.79 81.75 54 E24a_E25a KnownJunction 0 27.63 0.00 6.15 5.49 3.31 2.10 0.00 0.00 15.80 4.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 228.51 120.08 90.23 55 ER25a ExonRegion 0 18.85 0.61 6.62 2.98 8.31 4.15 2.42 3.50 16.63 2.04 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 187.77 105.17 84.36 56 E25a_E26a KnownJunction 0 28.08 0.00 4.88 1.33 11.71 0.00 3.93 2.55 17.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 120.96 110.71 89.20 57 ER26a ExonRegion 0 28.33 0.00 3.21 0.97 17.12 5.72 8.32 4.78 12.62 4.25 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 101.20 111.68 89.64 58 E26a_E27a KnownJunction 0 40.82 0.00 4.61 1.60 0.00 0.00 6.76 4.39 9.64 2.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.88 83.89 106.70 59 ER27a ExonRegion 0 20.15 1.81 6.67 3.96 9.88 6.36 8.66 9.34 15.41 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 102.95 111.82 87.67 60 E27_Da KnownBoundary 0 0.00 0.00 3.02 0.00 0.00 0.00 4.50 0.00 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.83 49.35 15.96 61 E27a_E28a KnownJunction 0 6.96 0.00 3.46 3.70 7.64 0.00 3.93 6.78 8.01 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.05 75.99 93.98 62 ER27b ExonRegion 0 4.91 0.73 2.79 1.16 2.49 2.09 1.92 1.73 4.48 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.12 23.12 9.63 63 E27_Db NovelBoundary 0 20.37 3.35 0.00 0.00 0.00 0.00 2.16 2.05 6.25 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 25.66 7.77 64 I27 Intron 0 3.70 0.00 0.00 0.00 4.68 0.53 2.32 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.35 15.18 7.70 65 I27_AR1 ActiveIntronRegion 0 6.35 0.00 0.00 0.00 9.63 1.10 1.59 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.61 17.48 0.00 66 I27_SR1 SilentIntronRegion 0 1.23 0.00 0.00 0.00 0.00 0.00 3.07 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.22 13.28 15.32 67 ER28a ExonRegion 0 12.83 0.00 6.84 5.93 12.83 1.30 7.21 9.31 12.89 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 150.44 83.47 101.01 68 E28_Ab KnownBoundary 0 17.41 0.00 9.82 4.93 20.12 2.84 7.99 4.81 10.85 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 151.91 93.56 101.50 69 ER28b ExonRegion 0 25.58 0.00 6.65 6.06 10.73 5.83 12.03 9.54 11.37 1.59 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 173.93 108.17 109.41 70 E28_Da NovelBoundary 0 7.19 0.00 0.00 1.40 0.00 0.00 10.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.90 24.92 0.00 71 E28a_E29a KnownJunction 0 32.15 0.00 3.67 5.66 4.33 5.28 15.99 7.02 15.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 184.47 93.07 101.75 72 I28 Intron 0 14.22 0.44 2.52 0.83 5.08 0.94 2.58 1.05 3.04 0.46 0.16 0.62 0.52 0.11 0.19 0.00 0.00 0.00 0.00 0.06 12.24 10.84 9.95 73 I28_SR1 SilentIntronRegion 0 14.24 0.44 2.53 0.83 5.08 0.95 2.59 1.05 3.05 0.46 0.16 0.62 0.52 0.11 0.19 0.00 0.00 0.00 0.00 0.06 12.25 10.85 9.96 74 ER29a ExonRegion 0 32.45 0.00 4.01 4.83 1.70 14.45 10.35 8.28 14.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 175.16 114.85 92.37 75 E29a_E30a KnownJunction 0 37.56 0.00 2.87 1.83 0.00 27.94 4.02 6.70 8.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130.72 103.24 74.52 76 ER30a ExonRegion 0 26.03 0.00 6.63 5.10 11.45 7.91 9.44 5.10 9.73 1.56 0.00 1.47 0.80 0.28 0.00 0.32 0.00 0.00 0.00 0.00 101.73 95.40 70.49 77 E30_Da KnownBoundary 0 3.78 0.00 4.82 3.40 3.99 11.53 4.24 3.61 8.59 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 17.85 35.15 26.63 78 E30a_E31a KnownJunction 0 3.78 0.00 3.67 0.00 0.00 0.00 4.50 0.00 0.00 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.47 5.20 8.37 79 ER30b ExonRegion 0 9.60 2.58 2.92 2.22 7.23 3.60 6.89 3.77 9.38 2.62 1.37 1.80 2.51 1.43 2.09 2.58 2.55 1.77 2.25 3.35 26.38 44.67 29.19 80 I30 Intron 0 14.13 1.60 4.40 1.65 6.66 1.34 3.64 5.53 10.60 1.97 0.20 0.37 0.20 0.28 0.00 0.08 0.00 0.00 0.00 0.22 20.82 34.09 15.99 81 I30_SR1 SilentIntronRegion 0 3.94 0.36 1.90 0.94 7.24 0.29 2.49 2.97 6.41 0.95 0.64 0.00 0.00 0.07 0.00 0.41 0.00 0.00 0.00 0.05 25.26 27.09 20.93 82 I30_AR1 ActiveIntronRegion 0 9.15 1.03 2.43 4.41 5.87 0.46 4.23 5.23 7.89 1.56 0.91 2.09 0.57 0.98 0.00 0.00 0.00 0.00 0.00 0.82 37.41 38.78 23.24 83 I30_AR2 ActiveIntronRegion 0 28.65 0.00 3.86 0.94 8.03 0.00 4.79 11.97 10.17 1.15 0.00 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 2.13 26.61 22.92 13.78 84 I30_AR3 ActiveIntronRegion 0 13.63 1.59 3.86 0.57 4.44 0.31 7.04 8.05 8.22 2.18 0.00 0.00 0.11 1.23 0.00 0.00 0.00 0.00 0.00 0.36 34.35 26.53 9.96 85 I30_AR4 ActiveIntronRegion 0 9.84 4.07 3.80 2.86 9.23 4.68 8.14 5.27 6.73 2.64 0.00 0.00 1.64 0.89 0.00 0.00 0.00 0.00 0.00 0.00 16.75 31.88 11.45 86 I30_AR5 ActiveIntronRegion 0 30.72 0.68 3.00 2.87 8.99 6.91 3.85 2.97 7.41 1.04 0.00 0.00 2.04 0.83 0.00 0.00 0.00 0.00 0.00 0.00 17.91 47.57 24.10 87 I30_AR6 ActiveIntronRegion 0 9.31 0.89 2.41 1.79 0.00 3.22 4.07 3.40 3.24 0.75 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 8.72 26.56 10.33 88 I30_AR8 ActiveIntronRegion 0 17.38 2.20 5.85 1.37 7.13 1.24 3.64 6.62 13.54 2.55 0.00 0.32 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.19 17.80 36.02 13.65 89 E31_Aa NovelBoundary 0 10.89 0.00 7.78 0.00 4.33 4.43 8.04 8.13 14.09 7.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.96 50.64 50.28 90 ER31a ExonRegion 0 20.50 0.00 9.24 2.14 7.49 3.21 2.58 4.51 9.67 4.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.35 40.43 26.84 91 IG39_AR4 ActiveIntergenicRegion 0 1.76 0.34 0.25 0.34 0.62 0.97 0.78 0.43 2.55 1.38 0.00 0.08 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 4.66 7.54 2.48