Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PHOSPHO2	Gene	0	16.81	76.40	37.01	50.42	24.67	56.03	42.84	20.01	27.58	32.04	19.82	45.87	36.08	18.15	23.11	11.70	11.28	16.96	24.42	50.55	3.04	9.93	4.16
2	359744	Transcript	0	12.98	64.18	31.82	41.18	19.52	43.46	37.76	20.77	21.86	26.32	15.05	37.87	32.19	11.04	19.92	9.05	5.85	12.10	19.22	39.72	1.36	10.18	4.24
3	438838	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	438710	Transcript	0	0.18	2.54	3.19	4.28	0.00	9.57	1.70	0.07	4.19	4.88	5.35	0.00	0.00	9.81	6.51	1.75	1.46	6.81	4.03	4.60	1.62	2.07	0.00
5	449906	Transcript	0	4.09	13.67	4.77	2.21	0.14	3.38	3.56	1.46	3.49	3.05	2.33	2.76	5.01	10.22	1.30	0.31	0.74	0.00	0.33	5.10	0.00	0.00	2.28
6	476919	Transcript	0	1.18	7.34	3.82	2.14	1.20	5.60	4.99	1.06	2.97	3.06	1.61	9.90	8.52	2.34	2.06	2.33	1.89	1.44	1.47	6.75	0.00	0.75	0.33
7	ER1a	ExonRegion	0	1.21	0.00	0.00	0.39	1.91	4.19	1.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.04	0.00	0.00	0.00
8	ER1b	ExonRegion	0	9.66	11.69	1.38	5.28	5.69	28.42	7.86	0.00	0.00	0.00	7.25	0.00	1.76	5.48	4.53	6.13	7.01	12.24	13.34	7.98	1.38	1.17	2.75
9	ER1c	ExonRegion	0	16.07	41.61	2.70	5.49	10.35	37.03	17.10	0.00	0.00	3.58	7.92	0.00	1.67	10.29	2.56	4.89	6.72	17.53	11.66	5.07	2.81	0.65	1.89
10	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1d	ExonRegion	0	0.36	2.51	2.78	2.16	0.00	3.36	3.40	0.15	2.62	5.24	5.86	0.00	0.00	9.96	3.00	0.00	2.91	9.80	8.06	3.50	3.24	1.82	0.00
13	E1_Db	NovelBoundary	0	0.00	3.29	4.85	1.56	0.00	0.00	0.00	0.00	0.00	1.18	0.00	0.00	0.00	4.83	0.00	4.36	0.00	14.05	12.71	0.00	0.00	8.82	0.00
14	E1b_E2b	KnownJunction	0	0.00	2.57	3.61	6.39	0.00	15.79	0.00	0.00	5.76	4.51	4.84	0.00	0.00	9.65	10.01	3.50	0.00	3.81	0.00	5.69	0.00	2.33	0.00
15	ER2a	ExonRegion	0	0.00	11.18	3.06	1.36	0.00	10.09	3.97	0.86	1.24	6.88	3.87	0.00	2.35	4.87	2.90	0.00	1.65	3.70	1.59	3.19	0.00	2.08	0.00
16	ER2b	ExonRegion	0	0.00	10.87	8.31	6.30	2.09	24.01	8.11	3.02	2.66	11.36	11.84	0.00	8.50	11.88	3.81	1.67	3.30	5.08	2.29	8.44	1.93	2.47	0.00
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	Ix	Intron	0	1.83	15.82	10.87	8.10	2.31	9.42	9.73	5.69	9.11	5.50	3.34	14.81	26.64	6.31	3.17	5.28	3.01	5.22	5.20	13.79	1.16	1.80	0.71
20	Ix_AR1	ActiveIntronRegion	0	2.04	3.91	2.65	2.95	2.55	15.14	4.46	1.25	2.69	1.62	2.82	1.73	7.91	6.22	2.40	15.57	4.68	4.42	9.25	6.16	2.14	0.00	0.00
21	Ix_SR1	SilentIntronRegion	0	1.90	18.05	12.41	9.13	2.41	9.27	10.86	6.51	10.34	6.24	3.58	17.12	29.81	6.66	3.43	4.38	2.98	5.59	5.01	15.42	1.11	2.11	0.82
22	ER3a	ExonRegion	0	5.85	18.56	14.49	22.64	15.12	35.31	23.55	9.08	15.25	17.46	12.81	11.37	13.22	14.27	14.34	6.78	4.17	6.49	13.64	27.55	0.95	4.52	2.95
23	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E3a_E6a	KnownJunction	0	0.00	61.11	29.39	24.31	55.86	102.38	45.27	12.36	25.29	29.84	17.21	26.26	26.46	26.37	17.80	0.00	0.00	4.60	22.31	35.99	0.00	0.00	4.27
26	Ix	Intron	0	7.08	59.51	20.61	22.50	10.07	19.93	23.52	13.46	10.39	10.36	5.66	34.39	35.35	8.75	7.03	8.08	2.76	2.70	6.66	20.90	0.00	3.92	1.23
27	Ix_AR1	ActiveIntronRegion	0	6.29	55.57	10.61	14.08	8.11	19.65	28.30	6.99	6.10	4.11	2.48	29.34	34.44	7.49	3.64	8.47	0.25	1.82	3.38	20.51	0.00	2.52	1.45
28	Ix_SR1	SilentIntronRegion	0	6.74	75.39	28.43	26.88	9.17	27.27	34.57	19.24	13.15	12.68	8.81	27.18	35.78	7.07	10.58	6.11	6.42	3.35	9.38	26.99	0.00	4.17	0.98
29	Ix_AR2	ActiveIntronRegion	0	7.72	55.11	22.80	25.37	11.62	17.00	16.20	14.56	11.60	12.85	6.05	40.63	35.94	10.25	7.37	8.79	2.54	2.92	7.31	18.59	0.00	4.61	1.23
30	E4_Aa	NovelBoundary	1	6.96	44.66	23.27	20.54	0.00	13.29	11.57	24.23	11.28	23.29	7.74	25.21	65.58	4.77	0.00	8.72	8.70	2.11	4.71	12.34	7.78	0.00	0.00
31	ER4a	ExonRegion	1	8.17	27.35	9.55	4.42	0.28	6.77	7.12	2.92	6.98	6.09	4.67	5.52	10.03	20.44	2.60	0.61	1.48	0.00	0.66	10.20	0.00	0.00	4.56
32	ER4b	ExonRegion	0	3.45	27.12	10.12	7.30	0.09	6.33	3.76	5.48	9.44	7.98	5.71	4.09	11.86	6.55	1.37	1.50	1.56	0.25	1.43	10.33	0.00	1.40	1.88
33	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E4a_E6a	KnownJunction	0	0.00	0.00	1.54	3.60	0.00	0.00	0.00	4.23	1.24	0.00	9.32	7.65	0.00	0.00	0.00	0.00	0.00	1.74	3.95	6.07	0.00	6.25	0.00
35	Ix	Intron	0	3.17	18.30	16.89	12.19	6.69	13.30	20.19	3.22	9.20	14.53	8.70	28.35	25.45	9.63	6.66	9.66	6.60	4.83	4.78	34.04	1.10	4.17	2.20
36	Ix_AR1	ActiveIntronRegion	0	3.21	18.48	17.06	12.31	6.76	13.43	20.38	3.25	9.29	14.67	8.78	28.63	25.70	9.72	6.72	9.76	6.67	4.88	4.83	34.36	1.11	4.21	2.22
37	E5_Aa	NovelBoundary	1	6.96	37.56	23.33	20.91	3.90	14.93	33.43	6.04	14.58	10.58	2.58	73.07	50.65	2.12	4.45	8.12	16.36	1.95	13.08	40.14	3.15	0.00	0.00
38	ER5a	ExonRegion	1	4.73	18.18	12.21	7.21	4.79	12.31	15.97	3.38	10.66	5.35	2.59	39.61	31.72	4.50	5.34	9.31	5.91	2.06	4.28	23.80	0.00	0.93	1.31
39	E5_Da	NovelBoundary	0	10.67	19.34	16.94	23.67	10.10	17.21	44.25	1.89	21.35	26.14	9.37	24.76	20.13	17.13	5.93	0.00	9.16	5.80	3.76	21.99	3.15	11.21	0.00
40	Ix	Intron	0	6.61	13.27	6.21	11.08	10.10	18.98	20.98	4.92	10.90	10.44	4.96	24.83	35.21	10.30	4.61	4.71	3.08	4.81	6.83	24.80	0.51	3.01	1.51
41	Ix_AR1	ActiveIntronRegion	0	1.74	0.00	0.00	0.00	2.20	4.53	5.45	0.00	0.00	0.00	1.59	12.92	29.20	2.96	1.68	2.44	2.72	1.52	0.00	17.43	0.00	0.00	0.00
42	Ix_SR1	SilentIntronRegion	0	6.91	13.79	5.96	11.99	12.10	19.58	26.61	7.12	16.42	11.38	5.34	40.53	52.05	14.64	4.42	9.71	5.39	5.78	6.40	29.13	1.11	4.97	2.95
43	Ix_AR3	ActiveIntronRegion	0	8.71	14.95	4.57	6.93	11.28	19.06	16.60	3.92	7.16	9.51	7.44	13.12	17.14	7.00	3.83	2.65	1.46	3.40	8.97	21.13	0.35	1.67	1.12
44	Ix_SR3	SilentIntronRegion	0	4.92	13.91	9.84	17.05	7.95	21.38	21.53	4.17	9.84	12.53	2.68	19.28	33.48	9.29	6.26	0.52	1.72	5.91	6.49	24.74	0.00	2.53	0.20
45	E6_Aa	NovelBoundary	1	17.11	19.01	29.69	24.21	16.55	15.67	31.66	6.08	13.37	23.24	5.37	75.62	57.14	9.95	25.96	4.36	12.72	14.47	0.00	32.21	3.15	5.39	0.00
46	ER6a	ExonRegion	0	27.12	88.73	66.72	79.74	44.90	94.11	63.71	24.15	41.65	47.73	36.87	80.13	54.27	28.15	34.90	15.69	23.18	22.88	40.67	91.92	4.85	12.44	4.01
47	E6_Da	KnownBoundary	0	9.63	76.63	71.70	69.92	46.26	110.33	56.40	30.68	42.45	50.61	34.01	120.64	41.72	41.97	48.09	22.56	24.03	12.19	53.18	97.22	6.30	21.25	0.00
48	E6_Db	KnownBoundary	0	21.26	91.63	54.37	88.73	72.58	60.48	72.96	23.91	52.08	46.07	17.58	44.41	57.14	27.19	38.32	13.07	17.86	15.42	4.80	71.14	3.15	7.65	0.00
49	ER6b	ExonRegion	0	16.40	85.51	77.87	88.79	48.16	79.77	60.90	24.80	55.02	54.54	28.99	93.52	63.08	40.12	48.45	14.86	20.63	18.94	33.61	88.30	4.85	17.19	0.00
50	ER6c	ExonRegion	0	29.90	160.38	60.55	104.52	44.75	94.63	71.01	35.65	53.09	61.02	29.12	83.49	56.81	27.78	40.93	21.31	22.25	31.10	41.17	90.05	6.86	16.82	5.82
51	E6_Dc	KnownBoundary	0	63.05	120.11	76.43	126.19	43.38	109.08	99.45	44.57	53.85	75.62	29.22	115.39	88.14	22.01	45.37	7.95	18.14	25.87	54.59	81.88	0.00	20.39	4.10
52	ER6d	ExonRegion	0	24.76	128.37	63.64	81.97	37.12	82.74	74.19	41.54	43.73	52.63	30.09	75.74	64.38	22.09	39.84	18.09	11.69	24.21	38.45	76.40	2.72	20.36	8.47