Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCN1A Gene 0 0.78 18.38 3.11 48.98 1.10 19.76 9.26 8.37 10.06 4.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.17 0.78 10.25 0.41 0.00 0.12 2 375405 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 423058 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 409050 Transcript 0 0.00 2.43 0.00 11.19 0.00 5.22 0.00 5.05 62.64 14.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.81 0.00 8.88 0.00 0.00 0.00 5 303395 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 375395 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 7 491429 Transcript 0 0.00 11.59 0.00 11.61 0.00 3.01 7.81 5.11 2.75 3.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 1.04 1.31 0.01 0.00 0.00 8 473295 Transcript 0 0.25 2.41 0.08 5.60 0.00 3.04 1.65 0.82 2.12 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 1.05 0.00 0.00 0.00 9 ER1a ExonRegion 0 0.11 0.96 0.52 0.79 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.81 4.92 2.07 15.02 0.00 5.83 3.68 1.00 2.49 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.00 1.24 3.58 0.43 0.00 0.00 11 E1_Da NovelBoundary 0 0.00 0.00 4.41 21.58 0.00 0.00 2.21 2.55 1.10 4.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 0.00 12 E1a_E3a KnownJunction 0 0.00 9.41 0.00 11.02 0.00 8.69 3.53 0.00 4.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 0.00 9.01 0.39 15.00 1.15 3.76 2.64 1.93 4.39 1.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.89 0.00 5.56 0.94 0.00 0.00 15 E3a_E4a KnownJunction 0 0.00 2.83 0.00 5.26 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 16 E3b_E4b KnownJunction 0 0.00 0.00 0.00 8.02 0.00 4.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3b ExonRegion 0 0.00 6.10 0.00 4.09 0.00 1.83 0.00 1.73 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 18 ER4a ExonRegion 0 0.00 6.10 1.23 19.08 0.00 2.45 0.00 0.58 0.41 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 19 ER4b ExonRegion 0 0.00 11.24 0.56 19.32 0.00 3.31 6.53 0.70 4.88 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 4.57 0.00 0.00 0.00 20 E4a_E5a KnownJunction 0 0.00 5.79 0.00 13.42 0.00 5.51 2.25 4.31 7.09 4.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.56 0.00 0.00 0.00 21 ER5a ExonRegion 0 0.00 9.24 0.70 17.02 0.00 8.19 5.76 2.09 3.12 3.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 0.00 4.29 0.02 0.00 0.00 22 E5a_E6a KnownJunction 0 0.00 2.70 0.00 10.99 0.00 7.78 3.93 2.22 2.66 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 0.00 11.31 0.00 0.00 0.00 23 ER6a ExonRegion 0 0.00 12.05 0.00 15.94 0.00 4.33 1.74 2.01 4.58 4.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.29 0.00 13.02 2.35 0.00 1.63 24 E6a_E7a KnownJunction 0 0.00 12.83 0.00 18.41 0.00 5.79 4.06 4.11 4.95 3.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 7.99 0.00 0.00 0.00 25 ER7a ExonRegion 0 0.40 10.39 0.00 15.40 0.52 7.65 5.09 1.11 3.45 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 1.20 11.17 0.86 0.00 0.55 26 E7a_E8a KnownJunction 0 0.00 11.18 0.00 6.03 8.49 0.00 0.00 0.00 2.95 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.03 0.00 3.26 0.00 0.00 0.00 27 ER8a ExonRegion 0 1.69 6.32 0.00 8.73 2.09 4.56 1.53 0.00 2.76 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.23 0.00 6.12 0.00 0.00 0.00 28 E8a_E9a KnownJunction 0 0.00 13.16 0.00 14.95 0.00 9.99 2.25 1.60 1.56 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER9a ExonRegion 0 0.00 7.93 0.00 15.30 0.00 3.33 3.05 2.09 1.45 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.71 0.00 8.21 0.51 0.00 0.00 30 E9a_E10a KnownJunction 0 0.00 5.85 0.00 24.37 0.00 5.74 8.35 6.20 2.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.69 0.00 8.50 3.03 0.00 0.00 31 ER10a ExonRegion 0 0.52 6.65 0.45 14.43 1.32 5.02 2.28 4.23 2.97 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 13.76 1.28 0.00 0.00 32 E10a_E11a KnownJunction 0 0.00 5.99 0.00 14.22 0.00 2.78 0.00 0.00 2.69 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 24.10 0.00 0.00 0.00 33 ER11a ExonRegion 0 1.25 5.62 2.61 14.26 1.44 10.69 2.74 2.10 7.51 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.84 0.57 15.73 0.39 0.00 0.00 34 E11a_E12a KnownJunction 0 7.04 14.67 0.00 20.28 0.00 19.82 2.08 2.55 12.18 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.81 0.00 3.13 0.00 0.00 0.00 35 ER12a ExonRegion 0 0.26 6.80 1.25 24.91 0.46 13.30 3.52 5.31 6.14 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.76 0.55 12.25 0.35 0.00 0.00 36 E12_Da KnownBoundary 0 0.00 29.99 25.49 65.36 3.82 15.16 14.35 26.82 64.50 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.27 25.60 45.51 0.00 0.00 0.00 37 E12a_E13a KnownJunction 0 0.00 2.43 0.00 11.19 0.00 5.22 0.00 5.05 62.64 14.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.81 0.00 8.88 0.00 0.00 0.00 38 ER12b ExonRegion 0 0.00 2.47 2.21 30.41 0.00 4.06 4.41 8.98 2.35 3.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.17 0.00 10.39 0.00 0.00 0.00 39 E12_Db KnownBoundary 0 0.00 0.00 0.00 3.30 0.00 2.90 0.00 1.93 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 0.00 0.00 0.00 40 E12b_E13a KnownJunction 0 0.00 9.47 5.35 26.57 0.00 2.50 7.86 8.71 0.00 4.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 12.08 0.00 0.00 0.00 41 ER12c ExonRegion 0 0.00 0.00 0.00 1.36 0.00 1.50 0.00 0.84 0.00 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.00 5.93 0.00 0.00 0.00 42 E12c_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 9.14 0.00 0.00 0.00 43 ER13a ExonRegion 0 2.34 14.33 4.41 32.32 0.00 16.84 6.64 3.98 6.24 4.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.29 1.58 10.72 0.07 0.00 0.00 44 E13a_E14a KnownJunction 0 0.00 15.06 1.71 54.01 0.00 5.17 13.12 5.09 5.18 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.53 9.22 23.65 0.00 0.00 0.00 45 ER14a ExonRegion 0 0.05 11.60 2.14 34.88 0.00 11.49 5.67 6.01 8.90 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 1.84 10.71 0.00 0.00 0.00 46 E14a_E15a KnownJunction 0 0.00 25.39 0.00 36.69 0.00 8.40 3.80 1.77 4.57 4.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 12.02 0.00 0.00 0.00 47 ER15a ExonRegion 0 0.00 17.90 1.11 25.78 0.00 10.89 6.51 3.21 4.90 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.05 0.93 8.45 0.00 0.00 0.00 48 E15a_E16a KnownJunction 0 0.00 9.67 0.00 25.30 0.00 10.79 2.08 2.55 8.16 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 11.51 0.00 0.00 0.00 49 ER16a ExonRegion 0 0.00 10.24 3.11 24.81 0.00 7.89 3.40 2.91 4.71 4.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.71 1.37 8.17 0.31 0.00 0.00 50 E16a_E17a KnownJunction 0 0.00 3.35 0.00 10.45 0.00 8.52 6.27 2.26 7.32 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.46 0.00 0.00 0.00 51 ER17a ExonRegion 0 0.00 5.05 0.45 13.77 1.06 7.95 6.64 2.99 7.78 4.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.34 9.64 0.00 0.00 0.00 52 E17a_E18a KnownJunction 0 0.00 0.00 1.66 3.63 6.28 11.02 6.14 3.45 4.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 5.88 0.00 0.00 0.00 53 ER18a ExonRegion 0 0.00 0.37 1.40 6.75 1.68 3.17 3.71 6.61 5.48 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 3.92 0.47 0.00 1.24 54 E18a_E19a KnownJunction 0 0.00 3.35 1.24 0.00 12.22 2.56 4.02 5.71 8.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 55 ER19a ExonRegion 0 0.00 5.97 1.11 6.03 5.06 7.11 8.10 4.78 1.97 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.62 0.00 4.32 0.78 0.00 0.97 56 E19a_E20a KnownJunction 0 0.00 8.22 0.00 10.62 0.00 22.43 6.23 8.91 1.39 6.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 3.15 0.00 0.00 57 ER20a ExonRegion 0 0.00 4.90 3.02 16.73 2.35 6.32 7.27 9.74 6.76 3.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.10 0.00 6.47 0.27 0.00 0.00 58 E20a_E21a KnownJunction 0 0.00 3.35 1.71 12.25 0.00 13.91 10.20 8.71 13.66 5.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 3.13 0.00 0.00 0.00 59 ER21a ExonRegion 0 0.00 4.10 1.78 10.02 1.11 5.83 6.15 5.40 5.52 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 6.57 0.68 0.00 0.00 60 E21a_E22b KnownJunction 0 0.00 5.53 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.72 0.00 0.00 61 ER22a ExonRegion 0 0.00 11.59 0.00 11.61 0.00 3.01 7.81 5.11 2.75 3.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 1.04 1.31 0.01 0.00 0.00 62 E22_Ab KnownBoundary 0 0.00 23.75 0.00 20.94 0.00 0.00 9.67 8.30 9.98 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 8.44 0.00 0.00 0.00 63 ER22b ExonRegion 0 1.02 20.05 1.33 38.30 0.00 10.61 13.67 7.56 8.72 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.58 4.51 1.29 0.00 0.00 64 E22_Da NovelBoundary 0 3.11 31.84 4.67 17.41 0.00 0.00 4.50 3.82 6.57 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 3.13 0.00 0.00 0.00 65 E22a_E23b KnownJunction 0 3.63 2.70 0.00 19.74 0.00 32.59 21.07 5.34 3.33 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 0.00 0.00 66 I22 Intron 0 0.54 16.20 2.05 23.95 0.43 3.77 4.55 2.32 4.14 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.31 3.63 0.00 0.07 0.09 67 I22_SR1 SilentIntronRegion 0 0.83 14.64 3.03 25.68 0.26 1.81 3.78 3.27 3.42 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.62 4.37 0.00 0.00 0.00 68 I22_AR1 ActiveIntronRegion 0 0.00 22.29 2.00 23.71 0.46 3.85 5.96 3.74 2.13 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.32 0.55 1.12 0.00 0.00 0.50 69 I22_SR2 SilentIntronRegion 0 0.56 14.94 1.41 22.93 0.54 5.09 4.54 1.12 5.43 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 4.11 0.00 0.14 0.00 70 ER23a ExonRegion 0 0.76 7.22 0.24 15.45 0.00 7.28 4.96 2.45 6.37 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 3.16 0.00 0.00 0.00 71 E23_Ab KnownBoundary 0 0.00 0.00 4.35 19.38 0.00 11.07 0.00 2.30 9.92 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.26 0.00 0.00 0.00 72 ER23b ExonRegion 0 3.19 12.74 3.61 28.26 0.00 22.28 12.72 9.85 9.02 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.95 0.00 0.00 0.00 73 E23a_E24a KnownJunction 0 7.56 24.60 2.28 35.99 0.00 42.59 17.97 11.21 7.93 4.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.44 0.00 0.00 0.00 74 ER24a ExonRegion 0 3.74 15.83 1.11 45.19 0.00 37.36 11.84 11.69 8.55 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.94 0.00 12.52 0.00 0.00 0.00 75 E24_Da KnownBoundary 0 0.00 10.52 1.83 58.90 0.00 24.36 11.53 10.80 14.44 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 15.72 0.00 0.00 0.00 76 ER24b ExonRegion 0 0.00 14.75 2.77 43.35 0.00 20.70 4.25 9.32 13.63 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.15 0.00 15.85 0.03 0.00 0.00 77 E24b_E25a KnownJunction 0 0.00 22.17 0.00 26.47 0.00 12.72 14.44 11.67 7.47 2.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.34 0.00 0.00 0.00 78 E24c_E25b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 79 ER24c ExonRegion 0 0.00 0.00 0.00 1.36 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 E25_Ab NovelBoundary 0 0.00 16.31 0.00 14.02 6.62 40.37 10.42 9.61 9.75 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.92 2.35 0.00 0.00 81 ER25a ExonRegion 0 0.00 15.00 0.15 33.90 0.00 10.77 6.62 12.10 6.64 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.43 2.20 0.00 0.00 82 ER25b ExonRegion 0 0.00 11.81 1.83 58.41 0.00 33.43 20.74 13.59 12.89 2.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.88 0.00 12.80 1.62 0.00 0.00 83 E25_Da KnownBoundary 0 0.00 27.43 13.13 85.10 7.81 62.80 33.52 14.42 27.78 11.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 0.00 17.90 8.77 0.00 0.00 84 ER25c ExonRegion 0 0.00 23.64 2.02 59.35 0.00 30.07 14.56 10.03 14.33 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 11.17 0.00 0.00 0.00 85 E25b_E26a KnownJunction 0 0.00 37.16 2.31 43.92 0.00 30.61 10.73 8.05 11.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 11.38 0.00 0.00 0.00 86 ER26a ExonRegion 0 1.82 18.40 3.43 61.66 1.01 36.57 12.78 9.02 16.83 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.93 0.00 15.37 0.00 0.00 0.00 87 E26a_E27a KnownJunction 0 7.56 12.04 8.54 76.71 0.00 50.99 12.41 6.98 23.35 8.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.55 0.00 0.00 0.00 88 ER27a ExonRegion 0 0.59 16.86 2.91 64.77 0.65 36.34 12.66 9.99 15.80 7.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.71 1.22 14.36 0.95 0.00 0.25 89 E27_Da KnownBoundary 0 0.00 44.66 10.59 83.41 4.24 60.42 20.67 15.32 19.70 7.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 16.81 0.00 0.00 0.00 90 ER27b ExonRegion 0 1.61 42.07 7.44 107.79 2.45 34.39 15.59 17.65 16.57 6.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 1.18 11.57 0.11 0.00 0.07 91 ER27c ExonRegion 0 0.00 4.75 0.00 2.27 0.00 0.61 1.32 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00