Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HOXD3	Gene	0	14.20	38.10	60.52	52.75	27.77	67.43	50.54	45.61	46.34	35.54	0.04	0.00	0.00	0.00	0.02	0.00	0.00	33.18	34.74	68.28	0.12	0.93	0.48
2	459979	Transcript	0	2.60	10.77	15.52	16.60	3.35	8.60	9.54	16.78	8.72	5.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.03	5.89	21.96	0.99	0.20	0.21
3	432796	Transcript	0	0.00	0.00	0.00	0.00	0.00	2.56	0.00	0.00	2.98	2.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
4	468418	Transcript	0	5.56	10.47	9.33	19.33	7.80	17.22	8.13	11.03	10.80	8.36	0.00	0.00	0.00	0.00	0.02	0.00	0.00	7.67	7.61	19.06	0.00	0.40	0.24
5	410016	Transcript	0	0.65	1.70	1.97	1.92	1.44	1.73	1.61	1.38	2.00	4.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65	1.28	11.40	0.00	0.01	0.00
6	249440	Transcript	0	9.89	18.20	42.95	39.70	23.43	66.02	67.51	46.13	54.78	32.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	59.94	73.67	91.76	0.00	0.55	0.00
7	ER1a	ExonRegion	0	0.62	2.59	4.28	1.36	0.00	3.91	2.12	1.73	1.14	1.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.47	2.23	0.00	0.00	0.00
8	E1_Ab	KnownBoundary	0	3.19	12.04	33.85	5.99	3.40	26.29	14.09	17.33	16.72	7.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.03	4.71	8.25	0.00	0.00	0.00
9	ER1b	ExonRegion	0	0.00	7.17	15.26	8.05	0.00	4.19	2.05	8.68	4.68	4.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.19	0.00	8.05	0.00	0.00	0.00
10	E1_Da	NovelBoundary	0	3.78	6.58	10.32	1.37	3.48	30.38	14.62	11.75	1.77	10.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.55	4.05	24.80	0.00	3.06	0.00
11	E1a_E2a	KnownJunction	0	0.00	11.58	11.56	14.48	0.00	2.73	4.15	16.22	6.92	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.35	0.00	14.57	2.66	0.00	0.00
12	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.56	0.00	0.00	2.98	2.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
13	I1	Intron	0	7.14	12.95	19.80	20.99	6.86	14.10	32.12	29.75	16.04	10.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.71	19.25	50.87	0.00	0.00	0.55
14	I1_SR1	SilentIntronRegion	0	7.15	12.96	19.82	21.01	6.87	14.12	32.15	29.78	16.06	10.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.71	19.27	50.92	0.00	0.00	0.56
15	E2_Aa	NovelBoundary	0	14.74	26.90	12.21	16.98	7.56	2.16	28.35	21.97	4.63	12.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	28.71	47.68	2.78	0.00	0.00
16	ER2a	ExonRegion	0	7.18	18.13	30.72	33.95	10.05	19.18	22.35	32.39	18.10	13.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.44	17.20	49.08	0.32	0.61	0.64
17	E2_Da	NovelBoundary	0	17.78	18.81	19.40	23.01	3.48	2.90	36.21	17.58	13.11	15.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	32.94	69.61	0.00	0.00	0.00
18	I2	Intron	0	10.50	29.81	24.44	39.50	10.98	15.39	24.10	35.65	23.58	15.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.10	25.04	64.40	0.06	0.26	0.48
19	I2_SR1	SilentIntronRegion	0	13.12	28.77	28.96	40.19	12.32	18.10	29.42	44.58	26.79	20.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.48	29.43	82.18	0.00	0.37	0.48
20	I2_AR1	ActiveIntronRegion	0	15.58	38.39	42.39	61.35	18.95	31.07	38.72	74.12	46.98	34.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.15	48.11	88.31	0.00	0.04	0.53
21	I2_AR2	ActiveIntronRegion	0	29.37	33.55	49.93	94.89	17.73	44.47	64.87	87.94	65.15	26.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	22.40	39.42	93.62	0.00	0.00	0.00
22	I2_AR3	ActiveIntronRegion	0	30.24	45.32	56.02	89.95	21.02	43.49	73.57	87.90	63.87	31.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	21.38	46.87	96.35	0.00	0.00	0.00
23	I2_AR4	ActiveIntronRegion	0	31.60	72.09	54.68	86.57	29.16	42.68	61.18	82.97	55.41	28.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.95	57.67	128.76	0.00	0.00	0.00
24	I2_SR2	SilentIntronRegion	0	20.91	87.17	43.64	74.69	20.20	19.73	32.91	52.46	32.04	20.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.34	24.20	80.12	0.25	0.25	0.92
25	I2_AR5	ActiveIntronRegion	0	16.67	51.73	39.19	70.02	14.50	22.64	30.98	55.81	34.98	21.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.49	39.19	108.65	0.09	1.18	1.42
26	I2_SR3	SilentIntronRegion	0	4.86	11.97	13.50	24.79	6.61	10.50	16.25	20.48	16.28	9.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.18	19.42	42.66	0.05	0.12	0.27
27	I2	Intron	0	23.91	55.16	57.51	104.45	44.65	119.89	55.86	61.06	57.80	46.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	36.16	43.07	143.11	0.38	4.46	2.26
28	I2_AR1	ActiveIntronRegion	0	26.15	60.66	64.53	111.37	50.80	131.55	62.27	65.67	63.38	49.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	38.79	43.55	152.49	0.45	4.02	2.10
29	I2_SR1	SilentIntronRegion	0	12.63	27.71	22.27	70.57	13.46	61.64	23.65	38.30	30.03	33.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	23.17	41.28	97.10	0.00	6.81	3.12
30	E3_Aa	NovelBoundary	0	10.22	45.45	103.01	203.24	38.46	81.94	70.31	110.57	89.29	67.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	75.94	64.38	191.05	0.00	8.63	4.35
31	ER3a	ExonRegion	0	14.48	34.61	31.65	62.56	25.63	67.81	32.17	38.37	31.19	22.76	0.00	0.00	0.00	0.00	0.10	0.00	0.00	29.37	30.11	71.36	0.00	2.01	1.19
32	E3a_E4a	KnownJunction	0	6.89	0.00	8.19	14.15	4.07	0.00	2.25	7.39	1.79	7.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.94	0.00	2.88	0.00	0.00	0.00
33	E4_Aa	NovelBoundary	0	53.86	59.00	308.42	513.92	81.83	241.96	67.92	293.93	177.05	150.51	11.48	0.00	0.00	0.00	0.00	0.00	0.00	165.03	227.87	511.91	5.99	25.78	15.28
34	ER4a	ExonRegion	0	2.31	2.49	3.52	6.36	1.87	10.56	0.93	3.07	5.42	4.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.65	3.98	8.60	0.00	0.00	0.00
35	E4_Da	NovelBoundary	0	11.26	54.07	44.76	73.85	10.44	110.50	36.39	39.97	25.38	17.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	42.20	30.02	75.29	0.00	0.00	3.84
36	E4a_E6a	NovelJunction	0	0.00	0.00	15.67	7.69	0.00	0.00	0.00	7.15	14.06	10.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E4a_E7a	KnownJunction	0	3.04	0.00	1.45	12.19	4.07	4.54	0.00	1.56	11.89	4.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.40	3.95	12.46	0.00	0.00	0.00
38	I4	Intron	0	63.77	108.13	87.02	183.94	64.12	121.47	69.74	88.52	57.32	35.52	0.38	0.00	0.06	0.00	0.00	0.00	0.10	15.51	35.76	106.01	0.06	2.71	0.88
39	I4_AR1	ActiveIntronRegion	0	157.17	265.25	211.70	455.38	156.18	292.01	163.98	214.29	134.84	79.59	0.96	0.00	0.14	0.00	0.00	0.00	0.24	33.68	78.45	237.40	0.16	6.64	2.15
40	I4_AR2	ActiveIntronRegion	0	2.59	9.94	1.23	3.18	17.54	14.26	3.97	5.19	12.08	7.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.62	2.48	18.91	0.00	0.00	0.00
41	I4_SR1	SilentIntronRegion	0	2.20	3.74	3.10	1.69	3.50	10.81	10.74	3.89	6.48	6.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.55	11.09	22.05	0.00	0.00	0.00
42	I4_AR4	ActiveIntronRegion	0	0.72	4.44	7.00	1.66	3.51	11.45	9.00	5.51	6.30	6.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.72	3.12	26.99	0.00	0.36	0.00
43	I4_AR6	ActiveIntronRegion	0	0.00	3.46	10.67	1.36	2.08	11.41	7.16	8.64	3.71	2.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.59	13.33	28.45	0.00	0.00	0.00
44	ER5a	ExonRegion	0	1.29	3.40	3.93	3.84	2.87	3.46	3.23	2.77	3.99	8.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.30	2.57	22.80	0.00	0.02	0.00
45	E5_Da	NovelBoundary	0	7.04	9.14	2.75	4.73	0.00	11.19	14.84	5.63	8.85	14.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.62	8.38	40.91	0.00	0.00	0.00
46	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	I5	Intron	0	3.38	10.21	6.63	7.93	7.78	16.62	10.70	13.02	12.72	13.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.80	7.89	30.77	0.00	0.07	0.00
48	I5_SR1	SilentIntronRegion	0	3.39	10.22	6.63	7.93	7.78	16.63	10.71	13.03	12.73	13.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.80	7.89	30.79	0.00	0.07	0.00
49	E6_Aa	NovelBoundary	0	9.85	17.43	27.53	18.88	24.79	67.75	46.19	18.85	13.57	17.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.22	11.29	69.54	0.00	0.00	0.00
50	ER6a	ExonRegion	0	13.34	21.00	29.45	24.03	38.89	70.54	93.28	39.08	36.84	27.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	30.01	83.62	90.19	0.00	1.11	0.00
51	E6_Da	NovelBoundary	0	3.56	24.54	5.14	8.92	15.37	9.77	16.87	6.61	18.20	8.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.78	4.52	36.82	0.00	0.00	0.00
52	E6a_E7a	KnownJunction	0	6.45	15.39	56.44	55.37	7.98	61.50	41.73	53.19	72.71	38.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	89.87	63.72	93.32	0.00	0.00	0.00
53	I6	Intron	0	3.37	20.52	14.47	8.08	12.10	13.49	19.33	9.94	12.30	10.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.80	5.45	20.25	0.06	0.24	0.00
54	I6_AR1	ActiveIntronRegion	0	3.82	23.10	10.65	7.27	10.74	12.86	16.13	12.50	12.51	11.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.82	7.09	26.48	0.00	0.33	0.00
55	I6_SR2	SilentIntronRegion	0	3.58	21.58	16.14	8.88	13.39	14.18	21.78	9.99	12.87	10.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.96	5.68	19.79	0.08	0.23	0.00
56	E7_Aa	NovelBoundary	0	12.89	15.72	25.99	17.58	19.78	22.15	8.74	19.39	28.10	18.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.25	13.55	26.78	0.00	0.00	0.00
57	ER7a	ExonRegion	0	20.92	37.00	111.03	64.26	27.70	109.98	71.02	72.27	100.62	78.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	70.49	75.07	117.79	0.00	0.85	0.48
58	E7a_E8a	KnownJunction	0	10.59	60.06	191.68	97.26	28.18	133.50	100.43	101.54	95.86	76.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	96.05	85.46	119.84	0.00	0.00	0.00
59	ER8a	ExonRegion	0	24.91	79.79	120.19	88.81	59.40	128.64	104.90	76.97	85.31	65.57	0.13	0.00	0.00	0.00	0.00	0.00	0.00	62.18	53.58	97.34	0.14	1.07	0.19
60	ER8b	ExonRegion	0	44.45	68.20	33.18	44.24	70.60	78.43	73.02	23.27	25.94	19.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.04	15.19	20.62	0.00	1.76	0.00
61	ER8c	ExonRegion	0	1.06	15.25	1.84	1.36	3.34	3.21	5.30	4.75	3.71	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	IG16	Intergenic	0	39.89	102.63	18.22	14.64	81.58	102.67	102.02	25.70	21.43	8.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.28	100.65	43.64	0.00	0.00	0.00
63	IG16_SR1	SilentIntergenicRegion	0	42.75	110.08	19.42	15.57	86.54	110.57	109.39	27.33	22.76	9.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.30	108.53	46.63	0.00	0.00	0.00