Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NMI Gene 0 96.84 2.29 6.10 8.51 47.53 31.36 15.43 29.93 15.46 6.94 183.84 192.46 222.86 212.40 226.21 154.07 152.39 1.42 2.52 0.97 8.88 21.40 8.99 2 243346 Transcript 0 287.17 6.52 17.77 24.20 102.15 67.22 31.74 84.82 42.57 20.77 523.22 610.28 654.90 596.28 647.79 408.23 427.42 3.72 9.14 2.35 22.68 51.26 24.41 3 414946 Transcript 0 4.53 0.74 0.17 0.00 1.70 2.58 0.48 2.98 0.50 0.00 3.98 5.22 3.05 13.27 5.86 5.76 10.40 0.50 0.00 0.77 0.80 0.00 0.53 4 477072 Transcript 0 2.79 0.00 0.00 0.00 2.84 0.06 3.33 0.02 0.81 0.00 2.05 9.19 11.94 4.20 6.88 4.23 1.80 0.00 0.00 0.00 0.00 0.00 1.54 5 491771 Transcript 0 3.89 0.13 0.06 0.37 2.21 1.32 1.17 0.97 1.01 0.36 12.46 5.68 8.99 11.40 2.73 9.34 11.65 0.16 0.00 0.23 0.89 3.51 0.90 6 ER1a ExonRegion 0 1.03 0.00 1.32 0.00 3.39 1.62 1.49 0.99 2.00 0.50 13.05 11.35 1.03 10.47 12.91 8.05 2.68 0.00 0.00 0.00 0.44 3.14 0.38 7 E1_Ab KnownBoundary 0 2.74 0.00 1.63 0.00 25.98 14.93 11.79 0.00 1.79 1.48 18.48 12.60 0.00 79.11 98.40 34.01 16.64 0.00 0.00 0.00 2.72 3.00 3.67 8 E1_Ac KnownBoundary 1 134.02 0.00 1.77 3.76 304.75 232.59 95.57 18.69 9.03 5.37 245.22 0.00 0.00 351.58 319.80 361.79 191.30 0.00 0.00 0.00 30.21 25.96 11.61 9 ER1b ExonRegion 1 59.40 0.00 2.41 2.33 152.26 129.96 58.00 11.99 6.57 3.88 162.86 7.40 0.00 257.55 227.80 248.41 116.81 0.00 0.00 0.00 22.18 14.11 8.90 10 ER1c ExonRegion 1 42.56 1.22 2.65 2.37 48.00 42.84 15.32 13.65 7.04 2.16 158.32 7.83 17.72 234.39 180.51 312.67 149.53 0.00 2.97 0.00 14.98 12.11 15.23 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 0.00 0.00 0.00 6.17 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E3a KnownJunction 1 101.94 5.92 7.10 4.56 221.82 142.93 41.95 8.95 3.56 5.86 108.76 43.66 66.39 387.72 326.72 738.35 94.25 0.00 9.60 0.00 8.77 18.49 17.33 13 E2_Aa NovelBoundary 0 495.35 447.81 229.00 240.06 381.83 267.57 514.36 246.03 228.30 193.51 146.62 119.74 60.71 133.09 145.99 369.05 369.99 274.46 381.56 418.40 235.62 237.40 386.87 14 ER2a ExonRegion 0 6.47 2.22 0.50 0.00 5.11 1.95 1.45 2.03 1.51 0.00 5.16 3.06 2.98 13.50 13.13 8.82 14.09 1.50 0.00 2.31 2.40 0.00 1.60 15 E2a_E3a KnownJunction 0 7.11 0.00 0.00 0.00 0.00 5.79 0.00 4.44 0.00 0.00 6.79 12.60 0.00 21.72 4.45 8.46 17.11 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 116.29 5.10 13.80 6.78 148.09 137.72 61.56 42.87 19.46 8.41 319.93 191.09 412.08 301.75 261.98 330.52 273.59 0.15 1.98 1.25 15.48 26.27 12.56 17 E3_Da KnownBoundary 0 6.45 0.00 0.00 0.00 0.00 0.00 1.85 0.00 1.24 0.00 0.00 5.70 8.28 4.53 5.19 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E3a_E4a KnownJunction 1 173.88 11.38 8.72 13.29 65.62 46.39 23.19 52.66 30.79 14.00 422.11 192.66 510.03 307.67 275.67 145.77 306.50 1.58 0.00 0.00 28.91 23.64 0.00 19 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.53 0.00 0.00 2.47 0.00 0.00 9.07 0.00 0.00 0.00 0.00 2.69 0.00 20 ER3b ExonRegion 0 2.79 0.00 0.00 0.00 2.84 0.06 3.33 0.02 0.81 0.00 2.05 9.19 11.94 4.20 6.88 4.23 1.80 0.00 0.00 0.00 0.00 0.00 1.54 21 ER4a ExonRegion 1 125.72 8.13 9.07 11.72 55.66 63.45 39.45 54.62 26.93 12.85 463.51 244.18 510.28 361.53 291.87 153.96 374.98 1.85 0.00 0.00 26.00 25.84 1.76 22 ER4b ExonRegion 0 150.92 4.27 20.98 15.92 67.57 41.41 20.56 77.80 38.78 20.20 536.26 441.99 819.83 555.27 501.76 503.30 415.37 2.96 8.93 2.22 21.67 43.55 36.92 23 E4b_E5a KnownJunction 0 126.17 10.00 29.92 14.45 89.30 77.68 29.54 86.75 42.39 18.91 431.95 746.49 924.61 459.06 481.37 313.59 369.14 4.06 0.00 2.43 9.08 46.66 18.87 24 ER5a ExonRegion 0 217.96 7.75 22.49 26.70 107.59 106.52 40.99 76.91 42.66 19.74 587.97 807.62 1066.97 551.61 543.67 342.65 458.72 5.32 1.27 2.01 14.40 56.74 12.07 25 E5_Da KnownBoundary 0 3.70 0.00 0.00 3.66 0.00 2.78 2.03 1.85 5.50 0.00 2.68 6.30 42.37 11.89 5.19 15.64 4.11 0.00 0.00 3.26 0.00 0.00 3.41 26 E5a_E6a KnownJunction 0 395.77 9.67 30.51 33.23 61.12 64.51 31.58 94.06 51.04 22.86 724.66 916.95 1302.67 625.17 640.46 437.06 585.04 6.30 8.75 3.26 19.15 56.46 7.68 27 ER5b ExonRegion 0 7.78 0.26 0.12 0.75 4.42 2.64 2.33 1.94 2.01 0.72 11.40 11.35 17.98 20.32 5.45 18.68 14.23 0.33 0.00 0.45 1.78 4.32 1.79 28 E6_Aa NovelBoundary 0 58.38 0.00 0.00 0.00 14.86 2.56 1.72 4.11 0.00 0.00 9.48 30.16 32.95 22.01 14.71 0.00 21.79 0.00 0.00 0.00 0.00 0.00 0.00 29 ER6a ExonRegion 0 401.45 10.99 18.79 35.91 120.91 77.38 42.50 89.46 57.01 22.03 696.75 1085.16 842.63 697.32 700.80 478.82 578.55 6.46 5.12 3.64 24.80 63.93 28.43 30 E6a_E7a KnownJunction 0 690.94 9.14 9.11 38.82 156.96 96.14 33.92 76.81 39.76 23.77 652.27 772.90 590.55 748.43 814.51 470.22 631.32 1.66 3.95 0.00 25.51 71.40 42.68 31 ER7a ExonRegion 0 285.18 6.49 17.50 30.20 158.40 103.65 51.94 88.18 40.78 18.50 619.44 723.53 719.88 832.98 714.33 511.19 533.10 5.28 14.82 2.78 40.87 50.35 30.58 32 E7_Da NovelBoundary 0 3.78 0.00 0.00 1.63 10.70 18.57 0.00 4.48 1.48 1.13 7.63 6.00 6.82 13.89 18.30 3.25 20.01 1.53 0.00 0.00 0.00 0.00 0.00 33 E7a_E8a KnownJunction 0 183.81 6.38 12.27 24.64 130.90 82.62 44.78 86.67 45.40 21.01 593.10 590.29 537.95 805.94 931.33 637.78 481.25 4.27 28.33 2.49 58.63 46.78 35.60 34 I7 Intron 0 35.61 0.41 0.49 1.63 17.30 7.19 3.68 5.01 3.21 0.74 11.34 15.23 27.27 23.81 24.23 20.12 16.48 0.37 0.00 0.07 0.30 6.00 2.95 35 I7_SR1 SilentIntronRegion 0 40.60 0.48 0.58 1.81 18.98 7.68 3.98 5.64 3.42 0.81 11.99 14.95 27.85 23.26 25.24 19.12 17.27 0.22 0.00 0.08 0.35 6.69 2.74 36 E8_Aa NovelBoundary 0 51.19 0.00 0.00 3.86 18.85 33.67 8.08 27.81 4.63 1.16 17.43 44.11 56.98 37.08 57.48 40.42 23.38 0.00 0.00 0.00 0.00 5.33 7.85 37 ER8a ExonRegion 0 231.31 4.81 13.62 22.01 116.83 75.60 37.49 86.05 47.35 24.26 591.97 446.34 446.91 745.77 881.79 448.37 460.71 4.65 13.66 1.39 25.00 54.83 26.70 38 E8a_E9a KnownJunction 0 379.10 5.66 25.96 28.00 103.74 71.21 28.93 154.73 63.08 37.04 549.88 595.24 577.23 707.46 823.17 474.66 373.07 3.36 12.14 6.33 14.46 64.17 27.23 39 I8 Intron 0 23.15 0.00 0.00 0.75 10.85 5.63 3.25 4.12 2.49 0.42 6.66 4.82 15.56 7.02 12.69 8.77 5.27 0.23 0.00 0.00 0.00 4.10 2.53 40 I8_SR1 SilentIntronRegion 0 22.54 0.00 0.00 1.36 2.41 9.17 0.00 0.00 0.00 0.80 1.35 0.00 3.05 0.89 8.56 2.97 4.46 1.85 0.00 0.00 0.00 1.25 2.94 41 I8_AR1 ActiveIntronRegion 0 31.75 0.00 0.00 1.36 3.44 10.22 0.00 0.00 0.00 1.15 3.31 0.00 6.70 7.42 19.07 2.97 9.90 1.85 0.00 0.00 0.00 2.08 5.03 42 I8_SR2 SilentIntronRegion 0 26.92 0.00 0.00 0.93 14.10 5.72 4.12 5.35 3.50 0.51 8.18 6.16 18.19 8.32 14.31 9.99 6.31 0.14 0.00 0.00 0.00 4.55 3.21 43 ER9a ExonRegion 0 313.21 4.35 15.54 22.98 114.50 47.64 26.44 91.57 40.69 19.37 346.06 382.88 440.59 371.24 623.27 207.49 271.39 1.93 4.86 1.26 9.89 62.57 13.48