Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALNT3 Gene 0 21.56 4.82 2.25 14.19 13.13 6.59 9.78 3.73 6.03 3.91 6.94 7.31 11.95 4.25 4.54 15.88 4.35 0.81 1.70 6.46 4.96 11.77 5.46 2 392701 Transcript 0 1.88 0.42 0.00 2.98 0.15 0.15 1.16 0.00 1.33 0.28 0.60 1.58 0.63 1.78 0.96 4.96 0.93 0.42 0.31 4.46 3.44 0.68 2.53 3 412248 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 431484 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 422973 Transcript 0 0.00 6.45 0.00 1.93 0.00 2.78 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 414977 Transcript 0 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 0.00 7 447156 Transcript 0 0.36 2.17 0.60 1.75 3.45 0.61 1.31 1.03 0.69 1.17 0.32 1.77 0.00 0.00 0.00 0.79 1.63 0.00 0.00 1.40 0.00 1.72 0.00 8 437849 Transcript 0 5.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 463254 Transcript 0 0.00 0.00 0.00 0.00 1.06 0.00 0.96 1.02 1.41 0.00 2.29 0.00 1.85 1.91 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.87 0.00 10 409882 Transcript 0 0.84 0.00 0.00 0.00 0.02 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.21 11 ER1a ExonRegion 0 2.73 1.19 0.00 2.16 0.00 0.00 1.27 0.00 1.54 0.00 0.89 0.00 0.00 2.44 0.00 7.55 0.00 1.69 0.00 7.80 0.00 0.87 2.94 12 E1_Ac KnownBoundary 0 16.89 2.89 0.00 9.26 4.33 2.33 6.40 0.00 9.40 0.00 7.11 0.00 0.00 4.94 0.00 39.31 4.02 2.53 0.00 27.80 2.59 10.96 12.29 13 ER1b ExonRegion 0 7.53 2.03 0.00 5.00 0.00 0.00 2.65 0.00 3.84 0.64 3.87 0.00 0.00 4.51 0.00 17.83 3.30 1.85 0.00 12.77 0.00 2.08 5.87 14 ER1c ExonRegion 0 5.44 0.91 0.00 8.52 2.16 1.15 4.64 1.20 6.91 5.93 8.43 0.00 1.22 3.09 3.28 10.50 5.78 0.52 5.05 9.66 9.57 4.09 6.31 15 E1_Da KnownBoundary 0 9.33 2.50 0.00 12.52 7.64 0.00 3.84 2.55 2.63 0.00 17.64 0.00 0.00 4.53 4.45 15.12 9.16 0.00 0.00 5.82 5.93 11.94 11.95 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1d ExonRegion 0 2.40 1.35 0.00 2.48 1.21 0.30 1.63 0.42 0.75 2.65 5.81 0.00 3.86 3.67 0.87 6.78 3.38 0.00 0.41 1.34 3.61 2.22 3.49 18 E1_Db KnownBoundary 0 0.00 0.00 0.00 1.96 0.00 5.51 4.50 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 7.78 0.00 0.00 4.80 2.43 0.00 0.00 4.35 19 E1b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER1e ExonRegion 0 0.00 0.00 0.00 0.56 0.00 0.59 2.94 0.00 0.40 1.10 1.51 0.00 2.53 2.50 3.83 3.81 2.16 0.00 1.23 1.20 5.23 1.36 3.01 21 E1_Ad KnownBoundary 0 0.00 0.00 0.00 3.56 0.00 0.00 9.49 0.00 1.24 1.61 7.16 0.00 0.00 0.00 4.45 8.03 0.00 0.00 4.80 0.00 5.81 0.00 0.00 22 ER1f ExonRegion 0 3.07 2.10 0.00 4.15 0.00 1.47 1.39 0.00 2.17 0.87 1.64 0.99 2.55 1.39 1.00 2.60 2.90 0.00 0.70 1.84 5.13 1.42 2.81 23 E1c_E3b KnownJunction 0 0.00 6.45 0.00 1.93 0.00 2.78 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E1c_E4a KnownJunction 0 3.78 0.00 0.00 9.22 0.00 0.00 0.00 0.00 2.95 0.00 0.00 6.30 0.00 2.18 0.00 7.78 0.00 0.00 0.00 8.82 8.53 0.00 4.18 25 ER2a ExonRegion 0 0.00 0.00 0.00 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 26 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 0.36 2.17 0.60 1.75 3.45 0.61 1.31 1.03 0.69 1.17 0.32 1.77 0.00 0.00 0.00 0.79 1.63 0.00 0.00 1.40 0.00 1.72 0.00 28 E3_Ab KnownBoundary 0 0.00 6.12 0.00 1.53 3.57 0.00 0.00 2.55 2.34 1.10 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3b ExonRegion 0 2.87 3.10 1.58 5.74 1.38 1.85 2.29 0.63 2.17 1.89 0.84 0.00 0.00 1.16 0.00 3.07 2.80 0.00 0.00 2.63 0.95 4.24 3.63 30 E3a_E4a KnownJunction 0 3.26 5.99 0.00 9.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.38 0.00 2.82 3.24 31 ER4a ExonRegion 0 17.41 2.39 0.20 18.24 9.37 6.41 9.35 0.00 3.11 3.48 7.07 9.60 11.15 4.97 3.65 10.54 7.43 0.94 1.14 11.40 4.55 9.43 4.33 32 E4_Da KnownBoundary 0 12.22 0.00 1.60 20.68 0.00 9.65 23.94 0.00 1.42 7.36 2.47 6.30 14.61 7.42 4.45 15.12 3.65 0.00 0.00 8.82 0.00 11.51 4.18 33 ER4b ExonRegion 0 26.64 4.96 1.23 21.11 4.96 7.29 16.63 0.00 4.82 6.21 4.15 1.16 35.35 6.85 0.85 13.27 7.00 0.63 1.94 9.24 1.29 14.84 5.09 34 E4_Db KnownBoundary 0 51.34 12.89 0.00 18.98 11.12 8.18 4.50 0.00 5.15 2.69 4.53 0.00 46.75 4.94 0.00 19.31 0.00 1.58 4.80 11.70 3.15 15.00 3.76 35 ER4c ExonRegion 0 32.37 7.88 1.56 19.93 16.67 4.18 7.34 0.63 5.83 5.33 10.61 10.06 21.25 5.87 3.78 27.71 8.70 1.79 5.67 8.09 6.31 15.37 2.78 36 E4_Dc KnownBoundary 0 16.52 15.33 3.19 26.67 15.37 9.54 12.54 2.38 9.78 8.22 10.32 18.91 25.97 9.71 19.16 27.77 8.51 2.32 16.57 8.76 10.93 31.66 7.51 37 ER4d ExonRegion 0 18.90 9.25 3.31 20.71 9.53 12.09 14.82 4.32 11.77 7.01 14.24 7.38 32.83 8.17 6.78 30.24 6.10 2.79 7.05 11.66 17.99 21.15 10.55 38 E4_Dd KnownBoundary 0 16.08 0.00 5.14 23.21 18.51 17.66 12.54 8.34 13.17 5.69 17.37 0.00 45.94 14.54 0.00 34.01 4.77 6.38 3.76 0.00 13.84 4.96 7.51 39 ER4e ExonRegion 0 28.03 3.05 1.38 22.77 14.36 11.68 12.89 7.54 10.46 11.06 15.44 14.60 25.80 8.06 4.55 47.93 7.54 1.94 7.37 15.51 16.95 13.63 16.00 40 E4e_E5a KnownJunction 0 69.94 15.13 1.83 36.13 8.32 13.12 25.31 7.19 14.21 9.56 7.58 12.60 0.00 0.00 0.00 56.48 4.39 2.28 8.47 20.77 19.40 14.82 20.23 41 ER5a ExonRegion 0 33.78 6.06 1.98 14.57 11.85 7.63 15.14 3.49 10.45 6.37 9.80 11.97 12.11 5.75 3.88 36.94 6.57 0.45 1.30 13.48 15.54 12.14 12.83 42 E5_Ab KnownBoundary 0 32.23 0.00 1.74 9.52 14.09 13.63 21.24 4.64 9.81 2.50 27.27 18.91 28.08 7.42 8.90 26.32 9.26 0.00 0.00 10.99 16.87 19.78 30.90 43 ER5b ExonRegion 0 24.58 1.71 1.09 20.73 22.90 10.37 7.56 1.31 13.72 1.09 12.01 11.89 24.76 7.17 4.22 18.31 3.87 1.01 1.53 8.99 8.08 12.78 15.86 44 E5a_E6a KnownJunction 0 29.26 6.25 1.83 25.70 11.71 13.40 10.60 1.56 18.14 1.67 6.69 19.36 28.73 7.42 4.45 27.69 0.00 2.57 4.33 5.88 8.65 10.53 10.33 45 E6_Ab NovelBoundary 0 30.45 6.38 2.75 26.34 10.70 53.09 27.25 5.01 10.79 1.26 14.85 0.00 40.42 4.47 0.00 8.20 8.70 2.24 0.00 15.53 11.80 19.47 11.52 46 ER6a ExonRegion 0 23.56 6.98 2.29 23.71 8.92 30.14 15.93 3.46 13.09 1.80 8.25 13.57 29.86 8.12 1.74 19.12 5.72 3.57 1.59 10.21 9.99 13.75 9.50 47 ER6b ExonRegion 0 25.38 4.96 2.16 24.95 19.50 14.31 20.73 1.89 9.69 1.96 11.61 7.23 19.12 10.87 7.23 24.78 3.66 2.66 1.75 7.90 15.91 24.53 13.29 48 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E6a_E8a KnownJunction 0 32.38 5.79 0.00 17.68 21.65 5.17 19.48 2.55 11.52 1.13 6.42 6.30 25.16 14.24 0.00 36.74 9.07 4.06 4.80 8.88 16.99 18.86 7.60 50 ER6c ExonRegion 0 23.28 4.07 0.00 17.04 21.41 7.34 15.23 3.46 11.12 1.15 5.80 8.66 18.76 11.37 2.90 35.67 6.60 3.70 6.37 6.38 13.22 12.50 5.87 51 ER6d ExonRegion 0 1.67 0.00 0.00 0.00 0.04 0.00 1.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 52 E6b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER7a ExonRegion 0 4.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E7a_E8a KnownJunction 0 11.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER8a ExonRegion 0 29.27 8.00 4.83 16.67 16.86 12.21 16.38 1.88 10.02 1.76 14.67 8.73 17.38 8.56 2.42 34.12 14.65 1.45 1.14 6.51 11.15 16.85 9.48 56 E8a_E9a KnownJunction 0 31.26 16.05 9.67 17.95 19.35 4.43 18.72 0.00 6.66 1.67 11.79 41.41 26.78 9.42 0.00 41.53 3.55 0.00 0.00 11.89 9.08 17.27 11.18 57 ER9a ExonRegion 0 24.23 5.36 7.80 13.57 28.16 12.48 15.56 4.50 8.48 2.98 12.37 20.29 20.75 7.67 0.96 27.53 7.33 0.00 1.75 5.90 7.53 16.32 3.46 58 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.00 3.59 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E9a_E10a KnownJunction 0 24.30 2.70 5.80 8.32 7.64 10.45 12.94 3.41 4.63 1.58 7.84 6.30 14.12 10.30 0.00 41.10 4.21 0.00 4.24 3.26 2.78 5.88 0.00 60 ER9b ExonRegion 0 0.00 0.00 0.00 0.00 1.06 0.00 0.96 1.02 1.41 0.00 2.29 0.00 1.85 1.91 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.87 0.00 61 ER10a ExonRegion 0 39.81 10.78 3.40 13.83 15.70 10.07 16.07 4.81 8.06 4.70 11.90 23.28 23.11 5.64 2.53 32.74 7.08 0.00 2.46 7.16 6.50 16.31 8.60 62 E10_Da NovelBoundary 0 78.09 5.39 1.48 15.62 25.04 4.43 24.02 11.62 7.49 5.08 7.00 13.20 18.99 5.30 4.45 14.01 14.12 0.00 0.00 11.19 2.59 15.98 3.07 63 E10b_E11a KnownJunction 0 44.30 12.50 0.00 25.97 33.62 12.66 30.83 13.27 11.60 4.62 7.05 0.00 33.60 7.42 10.63 35.89 0.00 0.00 0.00 7.61 5.07 31.96 19.72 64 ER10b ExonRegion 0 56.34 9.49 2.16 20.64 26.88 8.38 27.05 12.10 9.41 5.52 8.28 8.04 24.34 8.43 8.43 29.01 9.59 0.00 0.00 8.81 3.78 25.50 12.31 65 ER11a ExonRegion 0 34.71 11.82 3.04 20.99 24.06 7.35 23.59 8.39 10.26 4.59 8.64 14.27 28.67 5.40 4.48 17.99 4.05 0.43 2.46 11.64 5.08 12.22 10.14 66 E11a_E12a KnownJunction 0 33.19 6.51 3.28 31.63 40.58 5.62 26.41 4.11 9.14 7.23 5.16 27.46 6.82 0.00 4.45 16.92 3.93 3.69 0.00 17.77 3.03 11.02 0.00 67 E12_Aa NovelBoundary 0 14.45 0.00 0.00 0.00 4.33 0.00 0.00 1.89 0.00 0.00 0.00 0.00 6.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER12a ExonRegion 0 39.84 9.21 3.36 27.94 35.02 21.79 19.38 5.88 11.08 5.54 14.08 6.15 28.23 6.69 9.33 24.51 5.15 3.64 1.12 15.23 3.52 16.91 10.88 69 E12_Da NovelBoundary 0 12.30 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 E12a_E13a KnownJunction 0 86.39 9.41 7.10 52.54 34.72 10.68 17.49 6.33 11.37 9.62 11.85 11.70 21.10 7.18 4.94 33.07 8.60 4.52 9.22 17.58 3.15 29.88 15.71 71 ER13a ExonRegion 0 45.82 10.06 5.25 33.24 15.62 9.50 18.27 4.65 10.40 6.34 11.98 14.88 13.67 3.35 12.70 29.33 4.12 3.62 5.02 12.13 4.64 14.63 7.54 72 E13a_E14a KnownJunction 0 92.68 15.26 1.51 37.26 31.75 9.60 20.67 11.50 8.01 6.02 12.21 0.00 13.47 4.77 22.25 16.41 3.74 3.61 7.91 11.82 2.35 27.07 11.78 73 ER14a ExonRegion 0 36.26 6.71 4.00 21.33 24.16 8.24 12.62 8.23 7.32 5.92 6.07 8.80 12.12 4.39 9.96 13.04 2.90 0.64 0.82 6.64 1.14 21.02 3.65 74 E14_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER14b ExonRegion 0 1.02 0.49 0.00 0.00 0.61 0.00 0.44 0.00 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.71 1.57 0.00 0.00 0.00 0.00 0.50 0.00