Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYTIP Gene 0 218.69 1.36 1.06 13.17 164.14 22.37 34.44 36.31 26.82 3.40 691.69 557.47 427.43 433.98 330.13 372.00 264.69 1.40 0.19 0.06 0.07 0.59 0.00 2 497432 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 439355 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 435117 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 264192 Transcript 0 165.24 1.11 0.74 9.45 106.66 10.13 20.14 27.28 18.49 2.50 403.37 405.48 372.52 269.23 238.12 219.31 151.83 0.52 0.23 0.00 0.00 0.29 0.00 6 457793 Transcript 0 0.00 0.00 0.00 0.00 0.30 0.20 0.00 0.00 0.96 0.00 1.40 2.41 1.30 1.08 0.00 1.32 1.28 0.00 0.00 0.00 0.00 0.00 0.00 7 462109 Transcript 0 5.55 0.30 0.00 0.50 2.61 0.00 5.64 2.64 5.02 0.83 26.10 23.88 14.83 7.64 2.08 12.51 5.99 0.00 0.00 0.00 0.00 0.00 0.00 8 483929 Transcript 0 3.19 0.00 0.01 0.82 3.93 0.12 4.09 0.22 3.18 0.02 10.68 6.67 7.04 7.53 3.08 4.61 5.26 0.04 0.00 0.00 0.00 0.00 0.00 9 418920 Transcript 0 12.03 0.00 0.00 0.37 6.38 0.00 2.67 2.36 2.02 0.00 14.84 6.07 3.69 3.22 2.80 4.36 8.47 2.53 0.00 0.00 0.00 0.00 0.00 10 IG21_AR5 ActiveIntergenicRegion 0 14.64 1.75 0.29 0.20 1.51 0.62 1.67 0.58 1.25 1.33 0.19 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.00 0.42 1.26 0.85 11 IG21_AR4 ActiveIntergenicRegion 0 22.68 2.03 1.23 0.00 0.00 0.00 1.32 1.73 1.24 2.29 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.30 0.00 12 IG21_AR3 ActiveIntergenicRegion 0 20.86 0.44 1.23 0.00 1.53 0.00 1.32 1.73 1.24 2.29 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 IG21_AR2 ActiveIntergenicRegion 0 11.51 0.47 1.16 0.63 5.15 0.00 0.31 0.00 0.86 0.79 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 IG21_SR2 SilentIntergenicRegion 0 14.80 2.95 2.46 0.65 0.38 1.71 1.26 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.49 0.00 15 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 3.61 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 1.06 0.00 0.00 0.00 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 3.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 22 ER4a ExonRegion 0 0.06 0.00 0.00 0.00 0.00 0.00 2.93 0.02 0.00 0.00 0.75 0.29 0.00 0.05 0.06 0.09 0.03 1.24 0.00 0.00 0.00 0.00 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4a_E6e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.05 0.02 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E5a_E6e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E5a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER6a ExonRegion 0 2.68 0.00 0.00 0.00 2.85 0.00 0.00 0.00 0.38 0.00 7.26 0.00 0.00 4.29 3.67 6.21 6.01 0.00 0.00 0.00 0.00 0.00 0.00 29 E6_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 4.16 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 2.35 0.00 8.46 9.07 0.00 0.00 0.00 0.00 0.00 0.00 30 E6_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E6_Ad KnownBoundary 0 13.85 0.00 0.00 0.00 4.33 0.00 1.72 0.00 1.62 0.00 18.32 6.60 0.00 14.36 8.90 29.39 4.77 0.00 0.00 0.00 0.00 0.00 0.00 32 ER6b ExonRegion 0 9.52 0.00 0.00 0.00 5.35 0.92 0.66 0.00 1.24 0.00 21.58 0.00 0.00 21.11 9.19 24.27 10.45 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6c ExonRegion 0 15.87 0.00 0.00 0.00 7.58 6.11 2.87 0.00 1.24 0.00 33.50 0.00 0.00 29.78 21.76 49.04 17.60 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6d ExonRegion 1 463.86 2.80 0.87 5.69 696.20 162.43 154.52 28.69 22.96 0.00 1069.74 84.32 63.73 622.75 418.22 766.21 511.72 0.02 0.00 0.00 0.00 2.66 0.00 35 E6_Ae KnownBoundary 1 449.93 2.50 1.51 9.36 764.77 122.26 139.55 51.42 32.26 0.00 1024.52 304.30 195.44 525.58 177.02 537.21 477.04 0.00 0.00 0.00 0.00 0.00 0.00 36 ER6e ExonRegion 1 157.38 1.20 0.78 7.14 124.11 16.99 25.86 36.85 33.99 1.20 1343.89 528.44 309.45 612.26 386.34 619.68 593.19 1.44 0.00 0.68 0.00 0.63 0.00 37 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E6a_E9a KnownJunction 1 134.39 0.00 2.66 15.38 59.42 5.79 11.04 39.51 43.03 2.98 1437.05 652.11 232.45 942.03 797.33 1201.91 599.25 0.00 0.00 0.00 0.00 4.96 0.00 39 ER7a ExonRegion 0 24.06 0.00 0.00 0.74 12.76 0.00 5.34 4.73 4.03 0.00 29.67 12.15 7.39 6.44 5.59 8.72 16.93 5.05 0.00 0.00 0.00 0.00 0.00 40 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER8a ExonRegion 0 7.76 0.00 0.00 0.02 16.88 0.00 1.67 6.25 0.03 0.00 7.61 18.39 25.07 3.71 9.78 3.78 10.47 0.00 0.00 0.00 0.00 0.00 0.00 42 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER9a ExonRegion 1 105.45 0.00 1.98 13.38 132.28 11.19 17.45 37.58 38.57 3.44 1403.98 762.43 334.44 888.27 569.39 971.05 501.31 3.89 0.00 0.00 0.00 2.67 0.00 44 E9_Da KnownBoundary 0 61.42 0.00 1.24 6.86 72.33 4.60 16.96 17.05 15.83 1.13 522.29 357.72 279.04 294.43 171.95 356.40 200.37 1.74 0.00 0.00 0.00 0.00 0.00 45 E9_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 2.58 0.00 13.47 4.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 E9b_E9b KnownJunction 0 133.51 0.00 1.63 12.75 388.03 22.77 37.41 29.20 27.34 6.61 1171.03 1013.58 540.55 962.75 536.75 814.66 387.75 12.39 0.00 0.00 0.00 0.00 0.00 47 ER9b ExonRegion 0 161.62 0.00 2.45 14.87 309.17 24.84 40.32 47.30 41.88 4.90 1247.07 960.35 553.00 893.12 485.04 791.13 403.31 11.09 0.00 0.00 0.00 0.76 0.00 48 ER9c ExonRegion 0 3.19 0.00 0.01 0.82 3.93 0.12 4.09 0.22 3.18 0.02 10.68 6.67 7.04 7.53 3.08 4.61 5.26 0.04 0.00 0.00 0.00 0.00 0.00 49 E9_Dc NovelBoundary 0 266.12 0.00 1.24 13.85 315.96 37.02 49.42 44.61 33.56 3.38 554.35 499.36 337.15 286.25 169.11 391.18 214.96 6.92 0.00 0.00 0.00 0.00 0.00 50 ER9d ExonRegion 0 246.57 0.00 2.45 18.91 441.50 41.03 54.78 60.93 53.57 4.59 1290.93 1118.08 626.71 899.15 493.94 833.68 429.94 11.09 0.00 0.00 0.00 0.00 0.00 51 ER9e ExonRegion 0 240.04 1.55 1.15 19.76 1343.57 234.13 223.35 61.59 66.11 6.06 1821.29 1179.40 803.42 950.53 649.82 1224.58 626.67 12.09 0.00 0.00 0.00 0.00 0.00 52 E9_Dd KnownBoundary 0 3.04 3.35 0.00 0.00 0.00 0.00 4.37 4.23 8.83 0.00 21.32 24.76 26.30 12.89 4.45 16.24 11.87 0.00 0.00 0.00 0.00 0.00 0.00 53 E9d_E10a KnownJunction 0 159.66 3.03 0.00 23.57 1798.22 337.87 327.82 63.58 75.46 6.04 2125.64 1218.85 899.13 1098.01 921.94 1357.25 784.29 6.72 0.00 0.00 0.00 0.00 0.00 54 ER9f ExonRegion 0 5.55 0.30 0.00 0.50 2.61 0.00 5.64 2.64 5.02 0.83 26.10 23.88 14.83 7.64 2.08 12.51 5.99 0.00 0.00 0.00 0.00 0.00 0.00 55 E10_Aa NovelBoundary 0 41.27 0.00 0.00 3.63 23.85 0.00 19.25 6.65 8.56 0.00 33.96 35.56 12.66 7.42 6.30 3.50 22.16 0.00 0.00 0.00 0.00 0.00 0.00 56 ER10a ExonRegion 0 275.74 1.46 0.78 24.07 513.05 108.85 126.04 72.01 61.24 7.11 1782.67 1205.76 584.00 931.69 592.38 831.30 717.61 2.96 0.00 0.00 0.00 0.29 0.00 57 E10_Da KnownBoundary 0 615.44 0.00 1.83 27.40 269.19 53.78 96.19 90.03 50.78 6.39 1698.69 1679.35 733.07 1099.83 674.09 783.38 697.05 0.00 0.00 0.00 0.00 2.33 0.00 58 ER10b ExonRegion 1 401.28 6.15 2.01 24.37 204.63 41.96 58.32 72.55 48.20 5.22 1611.72 1588.71 576.54 1058.58 562.29 662.93 572.08 0.75 0.00 0.00 0.00 2.53 0.00 59 E10_Db NovelBoundary 1 193.37 5.66 0.00 8.66 107.22 17.43 28.66 23.12 18.92 1.18 648.74 696.83 249.33 503.03 236.23 299.32 240.21 0.00 0.00 0.00 0.00 0.00 0.00 60 E10_Dc NovelBoundary 0 11.26 0.00 0.00 0.00 33.79 0.00 4.15 7.06 18.00 0.00 26.69 12.60 6.82 14.89 0.00 7.78 8.88 0.00 0.00 0.00 0.00 0.00 0.00 61 E10c_E11a KnownJunction 0 508.24 10.06 3.28 17.28 179.80 21.01 43.01 52.94 51.30 1.13 1568.03 1203.54 694.60 1000.59 528.09 587.79 533.80 2.45 0.00 0.00 0.00 3.12 0.00 62 ER10c ExonRegion 0 374.43 10.17 2.67 18.96 155.68 25.01 41.40 54.37 48.39 2.92 1553.00 1270.50 634.01 1015.67 472.90 578.75 520.94 1.85 0.00 0.00 0.00 2.46 0.00 63 E11_Aa NovelBoundary 0 68.98 3.35 0.00 3.50 46.60 0.00 12.76 14.38 27.40 0.00 40.54 18.91 48.86 12.24 9.27 17.00 8.51 0.00 0.00 0.00 0.00 0.00 0.00 64 ER11a ExonRegion 0 467.21 2.68 3.43 34.20 196.90 32.01 54.68 71.69 63.16 5.23 1556.83 1415.92 619.88 1111.73 675.41 905.52 629.52 3.05 0.00 0.00 0.00 0.69 0.00 65 E11_Da NovelBoundary 0 92.83 0.00 1.33 1.80 39.13 0.00 22.08 15.69 14.61 3.06 59.54 55.22 45.45 21.96 13.35 40.76 27.21 0.00 0.00 0.00 0.00 0.00 0.00 66 E11a_E12a KnownJunction 0 604.33 0.00 5.80 52.77 286.33 43.21 41.56 97.88 65.86 8.46 1576.98 1382.25 698.17 1282.84 916.75 1097.15 645.53 4.64 0.00 0.00 0.00 0.00 0.00 67 I11_AR1 ActiveIntronRegion 0 75.70 1.07 1.20 5.56 42.74 2.42 17.02 19.19 11.47 1.92 52.37 75.38 89.11 26.39 30.98 36.98 31.30 0.00 0.00 0.00 0.00 0.00 0.00 68 ER12a ExonRegion 0 447.28 0.00 3.22 36.82 239.75 42.41 53.24 91.98 62.11 10.91 1997.37 1339.97 699.22 1269.02 757.27 985.81 693.05 1.98 0.00 0.00 0.47 2.23 0.00 69 E12_Da NovelBoundary 0 3.41 0.00 0.00 1.90 16.81 0.00 18.24 1.68 10.27 1.56 19.58 29.71 66.88 7.18 4.45 28.11 17.02 0.00 0.00 0.00 0.00 0.00 0.00 70 E12a_E13a KnownJunction 0 453.19 0.00 3.93 34.16 200.51 38.50 71.59 83.63 66.46 9.46 2130.70 1676.05 949.45 1272.54 875.83 863.53 812.06 0.00 0.00 0.00 2.84 9.06 0.00 71 I12_AR3 ActiveIntronRegion 0 21.66 0.68 0.03 4.22 25.97 1.49 9.10 16.75 17.54 0.27 22.20 42.64 63.70 9.73 20.95 34.66 17.26 0.76 0.00 0.00 0.00 0.57 0.00 72 I12_SR4 SilentIntronRegion 0 25.82 0.00 0.00 2.73 34.52 7.34 7.94 12.79 15.81 0.00 11.02 55.42 75.51 6.01 12.48 50.23 13.20 1.85 0.00 0.00 0.00 0.00 0.00 73 I12_AR4 ActiveIntronRegion 0 18.05 0.00 0.00 2.83 22.54 0.98 13.21 15.40 9.70 1.34 20.84 56.87 60.79 6.81 19.47 26.21 14.02 0.17 0.00 0.00 0.00 0.00 0.00 74 I12_SR5 SilentIntronRegion 0 29.63 0.00 0.00 2.23 19.95 0.12 7.52 9.34 14.60 0.00 12.70 37.98 31.46 3.37 19.83 11.55 5.18 0.00 0.00 0.00 0.00 0.00 0.00 75 ER13a ExonRegion 0 505.47 1.94 4.08 38.97 229.20 40.10 67.34 68.57 59.40 8.99 1992.07 1237.84 843.16 1088.64 709.55 883.21 719.30 1.85 0.00 0.00 1.18 4.01 0.00 76 E13a_E14a KnownJunction 0 835.93 6.58 1.83 51.58 311.80 70.02 70.13 71.18 59.69 11.09 1839.57 941.71 618.14 1094.48 871.13 1021.61 659.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER13b ExonRegion 0 0.00 0.00 0.00 0.00 0.59 0.41 0.00 0.00 1.92 0.00 2.79 4.81 2.61 2.17 0.00 2.64 2.57 0.00 0.00 0.00 0.00 0.00 0.00 78 E14_Aa NovelBoundary 0 97.05 0.00 0.00 0.00 26.99 0.00 23.54 11.09 6.28 0.00 43.38 36.91 13.64 6.77 13.47 12.30 25.25 1.87 0.00 0.00 0.00 0.00 0.00 79 ER14a ExonRegion 0 537.42 1.41 1.68 37.69 233.58 43.17 62.55 68.13 49.83 12.43 1705.21 1057.45 594.68 1152.13 799.35 988.90 669.51 3.64 0.00 0.00 1.15 1.42 0.00 80 E14_Da KnownBoundary 0 434.23 6.58 1.42 28.53 284.04 40.66 71.46 62.31 45.95 9.54 1369.72 1044.79 590.22 1136.39 837.51 788.60 618.51 3.86 0.00 0.00 0.00 5.76 0.00 81 ER14b ExonRegion 0 327.81 2.21 1.49 18.90 210.47 20.27 40.27 54.57 36.59 4.99 799.47 810.95 745.04 534.17 472.57 432.40 297.65 1.04 0.46 0.00 0.00 0.57 0.00 82 IG20 Intergenic 0 40.95 0.45 0.15 3.52 36.98 2.94 7.39 9.50 9.05 0.60 23.42 82.19 67.93 27.01 28.21 21.28 20.17 0.15 0.00 0.02 0.04 0.07 0.00 83 IG20_AR2 ActiveIntergenicRegion 0 42.26 0.00 0.00 4.42 52.89 2.90 13.09 11.20 17.83 0.34 80.24 202.86 147.61 83.91 40.72 47.59 52.21 0.00 0.00 0.00 0.00 0.00 0.00 84 IG20_SR2 SilentIntergenicRegion 0 118.83 1.03 0.00 8.85 118.91 8.53 22.01 21.04 26.81 3.69 96.64 291.43 263.69 104.26 99.46 58.68 62.16 0.47 0.00 0.17 0.00 0.26 0.00 85 IG20_AR1 ActiveIntergenicRegion 0 158.28 1.67 0.30 11.30 130.78 8.46 21.00 33.77 22.87 2.15 65.52 264.39 173.16 73.85 102.19 59.90 37.09 0.81 0.00 0.04 0.00 0.11 0.00 86 IG20_SR1 SilentIntergenicRegion 0 11.75 0.19 0.14 1.52 11.19 1.42 3.23 3.76 4.44 0.05 6.15 23.12 27.04 8.48 7.32 9.31 11.69 0.00 0.00 0.00 0.05 0.04 0.00