Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYBRD1 Gene 0 170.30 6.35 21.70 57.61 92.77 57.18 37.72 58.11 58.86 19.91 27.81 30.67 26.41 66.58 29.47 49.61 14.96 1.21 2.64 3.86 603.99 1171.03 454.52 2 409484 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 4.49 0.03 3 468308 Transcript 0 20.35 24.52 0.79 0.62 14.60 15.49 23.87 2.81 2.02 1.04 7.27 19.84 23.94 18.60 26.99 31.77 12.82 4.74 23.78 24.27 12.67 20.94 31.51 4 321348 Transcript 0 321.91 5.54 52.59 119.59 132.11 51.38 41.77 113.44 52.76 24.95 11.20 28.01 19.74 30.01 35.41 15.61 4.58 0.39 0.00 1.78 197.24 1278.66 238.83 5 375252 Transcript 0 6.22 0.00 1.71 2.06 8.66 0.00 0.00 0.00 6.19 0.00 2.32 5.40 0.00 2.24 5.44 3.59 0.00 0.00 0.00 0.00 36.39 78.81 26.04 6 474182 Transcript 0 0.71 0.65 0.00 0.00 0.00 0.00 0.00 1.04 0.00 0.00 0.00 2.13 0.07 0.01 4.35 0.00 0.00 0.00 0.00 0.00 0.05 2.14 1.98 7 494587 Transcript 0 8.74 8.89 4.22 3.22 6.38 4.53 12.42 3.69 2.92 4.21 5.83 6.18 4.99 6.53 12.91 16.99 8.37 6.22 9.10 12.17 11.87 7.62 15.88 8 445146 Transcript 0 0.23 0.00 0.00 0.00 0.58 0.20 0.14 0.00 0.00 0.00 1.49 0.00 0.42 1.69 0.51 1.94 0.73 0.00 0.00 0.00 10.42 1.17 4.22 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 2.73 0.07 10 E1a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.25 0.00 11 ER2a ExonRegion 0 1.01 0.00 0.00 0.00 0.00 2.67 0.32 0.17 0.12 0.00 1.22 0.00 0.00 2.21 2.23 6.70 1.09 0.00 0.00 0.00 9.68 6.68 19.79 12 E2_Ab KnownBoundary 0 6.08 0.00 0.00 0.00 0.00 15.96 2.08 0.00 0.00 0.00 8.95 0.00 0.00 9.42 5.19 13.07 3.74 0.00 0.00 0.00 46.77 23.15 103.37 13 ER2b ExonRegion 1 39.76 0.00 1.63 4.91 6.57 44.68 10.31 2.93 7.26 1.39 6.38 0.00 2.42 41.64 17.85 54.76 3.10 0.00 0.00 0.00 381.91 241.81 334.69 14 E2_Ac KnownBoundary 0 10.59 0.00 0.00 0.00 0.00 0.00 4.28 0.00 1.79 0.00 0.00 0.00 0.00 4.59 0.00 0.00 0.00 0.00 0.00 0.00 14.39 19.17 32.18 15 E2_Ad KnownBoundary 1 79.64 0.00 4.79 11.19 9.68 55.93 10.16 1.56 12.36 5.67 2.00 0.00 0.00 46.56 5.56 86.39 4.49 0.00 0.00 0.00 672.01 308.07 465.57 16 ER2c ExonRegion 1 82.54 0.00 2.45 9.54 24.08 95.36 18.54 5.19 14.82 6.88 9.66 0.00 4.69 95.82 31.91 98.08 6.60 0.00 0.00 0.00 940.98 508.38 646.06 17 ER2d ExonRegion 0 25.62 0.94 3.85 12.85 13.44 24.56 4.23 7.58 21.09 8.17 21.17 6.60 7.77 61.63 24.53 55.53 10.72 0.02 0.00 0.03 807.14 436.93 351.53 18 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 19 E2a_E5a KnownJunction 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 20 E2a_E6a KnownJunction 0 23.71 0.00 3.37 27.34 23.17 10.62 17.14 15.40 33.25 15.02 17.06 6.00 6.82 97.18 37.95 83.14 17.11 0.00 0.00 0.00 960.95 674.92 651.24 21 E2a_E8a KnownJunction 0 6.22 0.00 1.71 2.06 8.66 0.00 0.00 0.00 6.19 0.00 2.32 5.40 0.00 2.24 5.44 3.59 0.00 0.00 0.00 0.00 36.39 78.81 26.04 22 ER3a ExonRegion 0 0.45 0.00 0.00 0.00 1.17 0.40 0.29 0.00 0.00 0.00 2.98 0.00 0.84 3.38 1.03 3.89 1.45 0.00 0.00 0.00 15.47 2.34 8.45 23 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.37 0.00 0.00 24 E4_Aa NovelBoundary 1 2725.15 2533.17 5803.70 6684.16 2013.24 1594.14 2748.38 6692.19 6338.79 6036.44 958.14 668.62 721.22 475.13 1048.03 2708.95 2008.32 9178.65 2564.12 2507.09 1191.87 1123.02 2349.45 25 ER4a ExonRegion 1 2.12 1.95 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 6.40 0.20 0.03 13.06 0.00 0.00 0.00 0.00 0.00 0.14 4.04 1.59 26 E4_Da NovelBoundary 1 73.27 118.93 103.13 166.15 69.52 37.88 70.62 147.29 137.70 139.25 112.34 19.81 6.66 42.56 29.92 69.81 76.58 123.61 88.94 105.46 152.16 68.58 77.77 27 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 28 E5_Aa NovelBoundary 1 508.61 266.20 83.44 82.81 188.71 207.10 306.97 68.35 61.17 53.91 250.01 88.68 33.93 89.76 101.61 323.68 324.82 138.83 207.35 223.84 69.25 83.83 180.63 29 ER5a ExonRegion 0 17.47 17.78 6.66 6.45 12.76 9.05 24.83 7.39 5.85 8.42 11.67 12.35 9.98 13.06 25.81 33.98 16.73 12.44 18.21 24.35 21.40 15.24 31.75 30 I5 Intron 0 3.66 0.00 0.00 0.00 2.31 0.00 2.29 0.00 0.00 0.00 10.02 3.08 16.69 3.30 0.00 0.00 0.00 0.00 0.00 0.00 7.62 5.40 5.08 31 I5_SR1 SilentIntronRegion 0 3.69 0.00 0.00 0.00 2.35 0.00 2.33 0.00 0.00 0.00 10.20 3.14 16.98 3.36 0.00 0.00 0.00 0.00 0.00 0.00 7.75 5.46 5.16 32 ER6a ExonRegion 0 32.94 2.65 9.96 25.42 31.91 46.06 17.54 35.35 54.87 16.31 65.33 33.94 43.33 101.45 44.51 68.88 35.47 0.00 0.00 2.89 1240.30 1001.02 481.14 33 E6_Da NovelBoundary 0 36.90 3.03 10.29 27.04 42.61 18.68 17.93 46.70 66.58 22.89 69.12 48.02 67.04 90.71 19.53 98.78 38.71 0.00 0.00 0.00 1139.48 1146.05 576.37 34 E6b_E7a KnownJunction 0 6.74 2.63 1.45 0.00 0.00 2.33 1.81 1.68 1.19 0.00 2.32 6.30 0.00 7.00 10.51 3.42 0.00 1.74 0.00 0.00 0.00 11.39 3.76 35 E6b_E8a KnownJunction 0 100.39 0.00 13.87 30.60 41.26 80.98 12.45 65.02 90.97 25.28 72.23 61.22 19.80 149.04 38.07 58.36 36.09 0.00 0.00 0.00 1254.95 1783.61 875.40 36 ER6b ExonRegion 0 74.88 2.23 14.82 30.18 48.55 56.41 14.06 59.51 84.22 25.67 83.02 55.87 49.36 140.29 39.79 91.43 47.78 0.44 2.12 0.41 1350.35 1648.26 794.29 37 E7_Aa NovelBoundary 1 21.41 19.14 24.39 17.41 17.06 36.23 75.87 28.01 15.10 29.23 9.79 81.63 15.10 89.00 9.64 40.42 22.25 28.69 23.62 9.20 14.70 13.66 34.32 38 ER7a ExonRegion 1 33.96 46.41 0.14 1.24 29.20 28.64 45.92 3.94 2.86 2.08 12.23 33.39 47.88 30.19 43.47 60.12 25.64 7.74 47.57 48.53 25.34 30.49 59.26 39 E7_Da NovelBoundary 0 205.37 188.85 330.71 369.65 139.64 146.05 263.61 354.88 313.10 249.52 82.49 37.36 105.51 61.92 44.63 160.47 184.85 377.72 107.67 251.96 91.18 76.91 130.52 40 ER8a ExonRegion 0 81.25 3.70 11.56 34.61 45.49 71.18 26.68 53.56 85.48 23.04 70.69 55.56 57.76 155.28 56.81 116.10 40.89 0.98 0.00 1.40 1458.90 1376.13 794.07 41 E8a_E9a KnownJunction 0 128.62 8.55 14.28 32.56 76.06 43.44 29.41 54.26 94.01 14.26 59.23 72.02 68.02 153.45 75.04 140.48 39.18 0.00 0.00 0.00 1489.14 1762.18 923.63 42 ER9a ExonRegion 1 74.96 4.94 7.47 29.19 50.97 36.87 27.58 45.31 78.64 21.34 46.11 79.01 86.32 154.29 53.19 121.40 31.24 2.05 0.00 2.05 1543.51 1221.91 812.30 43 E9_Da KnownBoundary 0 71.79 5.26 13.84 52.44 60.87 55.08 25.70 52.16 73.18 24.82 61.81 54.77 73.05 236.27 94.69 165.26 46.84 2.24 0.00 3.26 1606.95 1216.53 934.98 44 ER9b ExonRegion 0 98.23 4.10 12.47 49.52 75.36 56.81 36.45 54.27 75.02 25.00 41.10 47.87 46.41 101.96 28.40 69.29 25.01 0.38 0.00 0.70 831.42 1592.01 603.55 45 E9_Db KnownBoundary 0 124.02 11.18 32.32 55.74 65.37 104.20 51.36 83.30 110.24 17.49 34.01 65.72 39.45 89.71 34.61 66.22 9.44 0.00 0.00 0.00 799.28 1843.19 735.40 46 ER9c ExonRegion 0 285.00 5.39 32.63 84.26 151.89 85.82 54.69 81.59 80.73 25.48 27.90 31.02 20.72 70.30 30.26 48.96 10.29 0.05 0.00 0.85 671.31 1563.77 597.52 47 E9_Dc KnownBoundary 1 636.93 9.67 100.06 171.34 177.84 89.66 78.21 166.27 82.61 25.17 14.64 37.96 47.89 71.75 47.84 35.03 4.02 0.00 0.00 0.00 583.98 1390.31 621.78 48 ER9d ExonRegion 0 321.91 5.54 52.59 119.59 132.11 51.38 41.77 113.44 52.76 24.95 11.20 28.01 19.74 30.01 35.41 15.61 4.58 0.39 0.00 1.78 197.24 1278.66 238.83