Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYP27C1 Gene 0 6.49 8.13 15.74 2.24 2.98 15.41 4.51 2.02 7.69 0.52 0.46 3.11 4.18 2.31 4.25 1.89 1.87 6.82 2.57 8.22 6.63 24.51 29.01 2 409327 Transcript 0 0.00 0.58 0.00 0.00 0.00 0.02 0.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.00 0.00 0.00 3.00 1.66 3 335247 Transcript 0 2.54 3.03 5.77 0.93 1.18 6.83 1.64 0.94 3.03 0.17 0.20 0.62 1.07 0.72 1.24 0.66 0.60 3.26 0.81 2.84 2.09 10.42 13.19 4 ER1a ExonRegion 0 0.00 1.15 0.00 0.00 0.00 0.04 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 6.00 3.33 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 I1 Intron 0 0.86 0.52 2.44 0.27 0.60 1.82 0.48 0.23 2.05 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.83 0.10 2.85 3.18 5.70 13.59 7 I1_SR1 SilentIntronRegion 0 0.81 0.46 2.29 0.17 0.58 1.55 0.52 0.22 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.11 2.78 3.29 5.53 12.83 8 I1_AR1 ActiveIntronRegion 0 1.23 0.54 4.20 1.19 0.54 4.12 0.20 0.39 2.43 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.88 0.00 4.01 2.97 6.64 19.54 9 I1_AR2 ActiveIntronRegion 0 1.32 2.53 0.91 0.45 1.66 2.28 0.00 0.00 0.00 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.44 0.00 8.08 17.23 10 ER2a ExonRegion 0 0.93 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 1.00 0.00 3.90 13.79 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I2 Intron 0 1.19 1.14 3.46 0.71 0.94 2.45 0.65 0.00 1.94 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.22 2.54 2.01 6.29 10.93 13 I2_SR1 SilentIntronRegion 0 1.20 1.15 3.50 0.71 0.95 2.47 0.65 0.00 1.95 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.23 2.57 2.03 6.35 11.04 14 E3_Aa NovelBoundary 0 0.00 0.00 13.07 0.00 0.00 4.43 8.97 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 2.81 2.53 18.92 23.13 15 ER3a ExonRegion 0 3.65 3.63 15.44 0.52 0.68 12.86 2.03 2.50 6.95 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.97 2.44 8.64 10.47 24.43 39.57 16 E3_Da NovelBoundary 0 0.00 0.00 3.16 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 3.15 8.63 15.96 17 E3a_E4a KnownJunction 0 5.70 0.00 20.19 0.00 0.00 29.98 0.00 1.89 7.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.57 0.00 0.00 8.09 24.19 51.05 18 ER4a ExonRegion 0 1.18 3.48 18.19 0.00 0.65 6.77 2.00 1.96 8.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.17 0.00 6.40 7.72 14.46 38.39 19 E4a_E5a KnownJunction 0 0.00 0.00 16.20 0.00 0.00 4.32 1.85 4.31 13.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.88 0.00 12.46 6.30 11.33 20.23 20 ER5a ExonRegion 0 1.32 6.93 11.81 3.18 0.05 10.04 2.62 1.78 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.26 0.99 10.69 8.38 15.32 46.66 21 E5_Da NovelBoundary 0 0.00 0.00 1.83 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.67 0.00 0.00 0.00 3.12 15.88 22 E5a_E6a KnownJunction 0 0.00 0.00 9.67 3.36 0.00 2.61 2.25 1.77 9.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.26 0.00 17.26 5.81 8.14 32.95 23 E6_Aa NovelBoundary 0 3.78 0.00 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 3.00 12.72 24 ER6a ExonRegion 0 0.00 3.32 14.91 2.21 0.77 6.48 1.79 3.73 6.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.02 0.97 11.81 7.44 18.43 42.36 25 E6a_E7a KnownJunction 0 0.00 3.35 16.62 2.03 0.00 0.00 0.00 4.35 6.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 9.65 3.09 8.94 43.19 26 ER7a ExonRegion 0 0.94 2.96 9.18 1.79 0.00 1.51 0.57 5.03 4.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.37 0.00 5.63 8.03 11.76 37.62 27 E7a_E8a KnownJunction 0 3.48 3.29 4.61 0.00 0.00 2.27 2.12 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 6.20 11.68 17.02 0.00 28 I7 Intron 0 0.22 0.21 3.99 0.21 0.00 1.14 0.41 0.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 0.88 2.06 4.54 12.81 29 I7_SR1 SilentIntronRegion 0 0.22 0.21 4.00 0.21 0.00 1.15 0.41 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.89 2.07 4.56 12.86 30 E8_Aa NovelBoundary 0 0.00 0.00 7.66 0.00 0.00 0.00 0.00 0.00 4.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 7.96 16.05 31 ER8a ExonRegion 0 1.55 4.25 16.24 0.52 0.67 10.35 1.64 0.69 5.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.56 0.80 8.03 11.09 16.36 35.17 32 E8a_E9a KnownJunction 0 3.63 6.71 9.58 0.00 0.00 15.45 2.25 0.00 4.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.86 0.00 2.49 10.81 23.45 29.45 33 I8_AR1 ActiveIntronRegion 0 2.12 2.03 2.45 1.36 0.00 0.00 0.00 0.00 4.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.30 6.61 12.50 2.94 34 I8_AR2 ActiveIntronRegion 0 1.19 1.33 3.86 0.57 0.64 0.30 0.32 0.03 2.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 1.56 1.59 7.47 4.10 35 I8_SR2 SilentIntronRegion 0 1.38 0.30 9.32 0.76 0.00 0.79 0.74 0.46 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.48 0.00 2.35 2.46 9.26 5.43 36 E9_Aa NovelBoundary 0 0.00 0.00 2.66 4.06 0.00 5.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 2.47 0.00 11.69 37 ER9a ExonRegion 0 12.45 11.60 17.89 2.43 4.85 13.66 7.09 0.23 8.85 1.07 0.70 9.91 11.62 5.56 10.79 4.03 4.36 4.58 5.10 10.91 6.35 29.30 29.27 38 E9_Da KnownBoundary 0 34.97 8.95 11.97 7.39 40.07 53.15 40.63 26.00 13.98 17.11 2.16 5.85 19.15 0.00 5.56 11.96 12.81 4.19 30.02 44.04 5.50 9.80 18.44 39 ER9b ExonRegion 0 6.67 9.09 16.47 2.80 3.54 20.48 4.91 2.83 8.28 0.50 0.60 1.86 3.22 2.15 3.73 1.99 1.81 7.20 2.43 7.53 6.26 27.37 25.78