Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC093838.4 Gene 0 21.82 48.61 110.63 142.34 33.77 104.63 41.43 138.71 131.38 84.92 145.86 36.33 27.76 86.86 54.66 72.31 48.90 149.80 63.41 54.28 49.14 33.11 36.57 2 415574 Transcript 0 2.48 0.99 12.61 17.85 1.39 6.29 3.08 2.37 9.15 2.75 22.19 11.38 4.63 13.63 5.74 9.61 4.63 9.29 5.72 2.76 2.95 5.78 5.00 3 438378 Transcript 0 30.38 66.17 207.30 324.63 65.20 151.79 64.92 265.26 258.30 143.95 153.51 43.21 41.23 56.45 53.65 99.97 47.41 228.28 63.15 84.12 43.00 44.15 23.82 4 426369 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 416745 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 3.27 7.16 7.00 8.70 5.17 21.89 8.30 8.85 18.62 9.72 10.02 2.07 1.19 8.39 4.04 6.80 5.89 22.32 18.73 10.24 10.37 4.80 7.93 7 E1_Ab KnownBoundary 0 0.00 0.00 21.97 14.38 0.00 8.06 2.21 15.65 28.47 16.76 17.79 0.00 8.28 12.18 8.90 8.63 4.68 40.71 20.99 9.20 16.37 8.82 0.00 8 ER1b ExonRegion 0 47.75 29.93 23.45 32.30 19.40 70.17 46.67 26.25 40.68 20.20 64.45 4.74 2.27 50.60 34.68 39.01 43.53 78.21 38.62 33.44 32.47 35.88 34.60 9 E1a_E2a KnownJunction 1 50.90 57.88 41.87 76.31 41.43 114.88 65.63 52.29 97.37 44.32 110.34 18.91 0.00 43.85 25.71 49.99 27.21 133.11 76.80 87.76 39.04 35.58 75.29 10 ER2a ExonRegion 0 19.55 29.63 40.12 54.50 26.12 78.48 34.91 47.29 97.32 51.04 86.50 21.13 8.65 30.88 17.58 38.64 20.59 115.92 42.24 54.33 39.98 31.15 33.42 11 E2a_E3a KnownJunction 1 3.26 23.88 59.96 54.31 15.11 92.84 18.42 46.74 98.12 74.57 142.72 0.00 20.29 31.67 13.35 12.13 43.20 59.57 22.02 65.58 55.97 22.72 15.96 12 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 10.87 36.11 73.16 117.02 27.99 90.49 41.74 88.73 150.51 85.07 207.35 39.06 19.25 101.01 35.48 73.07 62.34 148.35 71.36 78.97 83.21 43.73 36.83 14 E3a_E4a KnownJunction 1 24.23 57.42 98.07 194.68 15.62 60.48 42.93 131.97 177.40 89.67 183.31 43.66 6.33 127.44 49.32 146.88 30.86 224.51 129.89 68.39 63.51 59.89 62.83 15 ER4a ExonRegion 0 18.58 61.04 101.71 158.49 64.01 111.71 72.87 126.15 176.10 110.45 170.96 62.76 58.15 111.53 63.67 91.22 64.98 179.28 96.39 91.13 74.57 64.92 72.02 16 E4a_E5a KnownJunction 0 17.11 114.65 117.50 206.60 65.96 137.19 41.69 149.84 176.59 120.13 229.95 75.92 82.14 136.09 50.81 73.14 55.91 247.15 85.84 117.61 76.85 69.93 55.14 17 E5_Aa NovelBoundary 0 6.89 21.31 8.43 9.29 4.24 2.10 22.88 4.07 6.92 6.66 0.00 0.00 6.01 0.00 4.45 12.05 9.26 5.93 0.00 14.51 2.53 0.00 3.41 18 ER5a ExonRegion 0 31.61 81.13 117.07 157.47 58.06 141.69 50.48 187.99 234.44 150.98 273.78 77.42 35.67 131.00 57.11 104.53 85.61 312.66 142.46 108.40 96.59 81.39 58.93 19 E5_Da NovelBoundary 0 12.97 6.51 25.87 12.55 8.66 2.67 9.32 0.00 8.13 6.80 0.00 6.30 0.00 0.00 14.46 10.60 8.79 11.61 0.00 5.75 0.00 0.00 0.00 20 E5a_E6a KnownJunction 0 59.86 122.68 154.55 128.59 85.14 261.89 62.14 244.84 251.94 168.51 297.34 94.68 28.73 155.87 65.15 114.33 120.34 318.74 193.98 136.85 75.12 87.07 26.29 21 ER6a ExonRegion 0 30.02 48.62 106.30 149.80 33.90 129.09 44.09 186.01 212.58 116.66 223.03 80.19 88.03 122.36 78.44 121.42 70.59 312.39 107.28 102.65 74.06 62.16 65.28 22 E6a_E7a KnownJunction 0 35.64 64.40 128.91 232.20 41.85 137.36 49.20 266.53 259.31 141.48 308.50 80.58 74.35 198.84 104.58 159.19 104.72 394.51 108.05 117.48 106.81 85.18 96.46 23 I6 Intron 0 2.94 3.77 7.62 3.77 0.00 1.70 4.30 8.36 0.85 2.38 6.27 0.00 3.58 4.92 13.69 9.65 0.00 11.07 8.86 5.92 0.00 0.97 2.72 24 I6_SR1 SilentIntronRegion 0 3.00 3.84 7.76 3.84 0.00 1.73 4.38 8.51 0.87 2.42 6.39 0.00 3.65 5.01 13.94 9.82 0.00 11.27 9.00 6.03 0.00 0.98 2.77 25 E7_Aa NovelBoundary 0 0.00 0.00 21.50 7.36 3.57 7.61 2.25 30.64 3.59 8.95 12.27 0.00 8.28 23.84 24.11 7.69 21.51 18.16 0.00 9.40 2.97 6.12 12.21 26 ER7a ExonRegion 0 37.10 57.52 114.56 217.91 56.14 150.75 74.82 232.30 247.56 143.28 296.79 86.34 67.70 154.81 87.97 143.17 97.78 363.14 183.91 97.51 106.98 75.99 74.64 27 E7a_E8a KnownJunction 0 66.31 68.41 85.92 190.69 49.49 179.61 100.78 179.00 211.57 123.73 258.01 72.32 38.80 100.01 124.11 118.17 94.25 266.84 180.99 117.74 109.28 72.44 68.12 28 ER8a ExonRegion 0 19.16 39.32 62.00 99.63 33.93 95.77 46.95 109.16 147.46 88.18 152.75 59.18 60.44 89.82 53.39 73.40 69.08 162.97 85.06 61.11 67.83 34.48 37.30 29 E8a_E9a KnownJunction 0 16.08 63.41 62.12 108.88 44.31 146.62 57.76 134.85 140.74 92.06 79.55 104.43 78.57 133.73 59.46 108.01 56.85 151.60 108.80 96.26 64.56 68.46 78.28 30 E9_Aa NovelBoundary 0 32.01 9.93 20.49 23.27 11.71 0.00 17.53 39.80 30.29 21.44 16.53 18.01 6.01 14.48 26.58 11.71 16.46 30.88 13.55 21.92 9.20 8.63 11.35 31 ER9a ExonRegion 0 22.41 53.91 87.35 131.92 40.22 140.47 64.27 118.43 143.56 98.45 173.06 82.00 67.49 102.56 55.17 90.84 65.97 204.23 117.57 79.60 79.60 46.17 61.98 32 E9a_E10a KnownJunction 0 27.56 34.40 93.46 125.39 59.00 182.85 69.20 148.85 157.32 120.13 168.15 68.42 39.28 126.02 55.75 107.15 79.48 177.17 110.12 80.34 84.94 26.15 38.41 33 ER10a ExonRegion 0 14.43 51.74 73.30 74.22 52.29 82.16 82.27 90.46 84.49 83.01 202.20 57.91 52.50 125.44 57.10 92.34 78.35 118.95 94.90 40.57 62.59 20.08 24.19 34 E10_Da NovelBoundary 1 42.90 48.54 68.86 60.20 53.74 81.03 56.57 90.77 78.47 54.72 74.65 118.54 46.43 79.99 40.55 71.69 46.75 134.02 147.39 88.14 44.42 54.07 38.58 35 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E10a_E12a NovelJunction 0 3.78 3.22 19.66 6.89 0.00 11.13 12.67 6.20 4.75 19.93 4.79 0.00 0.00 0.00 5.19 0.00 7.85 4.15 3.95 2.68 0.00 3.00 0.00 37 I10 Intron 0 5.88 22.28 28.32 39.42 15.19 57.88 22.50 58.03 51.78 31.18 55.03 17.42 15.59 33.21 19.30 30.35 21.16 84.17 33.27 29.50 27.71 14.53 19.75 38 I10_SR1 SilentIntronRegion 0 5.49 20.39 27.23 37.98 13.25 54.22 21.10 54.65 48.54 31.92 50.53 19.12 15.51 31.96 17.73 27.95 22.05 78.76 29.27 29.73 26.36 13.43 18.28 39 I10_AR1 ActiveIntronRegion 1 7.43 42.93 48.59 78.12 24.54 91.51 36.40 97.38 105.98 48.00 99.26 14.61 30.98 51.65 28.02 51.41 25.29 141.37 73.12 43.04 47.22 23.67 31.67 40 I10_SR2 SilentIntronRegion 0 1.90 27.52 11.92 30.36 18.13 52.05 30.70 38.06 31.82 9.41 58.46 21.88 15.33 35.10 18.61 30.32 8.35 47.79 31.81 7.38 15.44 8.18 16.98 41 I10_AR2 ActiveIntronRegion 1 13.70 32.20 42.52 50.55 35.77 98.24 38.25 94.91 81.73 38.11 92.87 17.46 15.51 53.20 35.74 48.89 27.13 160.18 62.16 45.68 48.21 29.43 36.05 42 I10_SR3 SilentIntronRegion 0 2.85 11.54 7.78 10.81 7.44 31.10 10.48 24.35 11.75 9.53 19.84 6.32 5.53 11.55 10.04 14.78 9.23 24.16 10.72 8.32 8.77 6.06 8.89 43 I10_AR3 ActiveIntronRegion 1 5.85 22.54 41.61 44.03 12.35 55.55 15.13 70.61 61.33 35.11 64.24 8.27 11.08 31.17 23.56 37.72 19.78 99.07 35.40 31.45 30.05 14.91 21.69 44 ER11a ExonRegion 0 4.81 16.82 53.51 55.70 9.17 58.18 20.71 34.15 44.04 43.63 88.22 17.57 13.94 41.16 24.54 44.45 37.25 52.00 23.80 24.41 30.06 9.58 9.73 45 E11_Da KnownBoundary 0 92.46 138.59 405.60 258.68 80.05 419.53 196.08 393.08 344.76 401.77 580.25 185.91 152.43 220.38 90.74 212.68 384.01 741.97 206.69 229.08 242.60 106.18 103.03 46 ER11b ExonRegion 0 15.46 33.34 85.86 103.69 25.24 93.52 29.86 98.45 96.94 58.98 86.04 40.79 35.18 76.53 50.01 50.76 25.84 139.04 33.99 23.74 25.46 13.13 30.80 47 E11b_E12a KnownJunction 0 32.01 87.02 104.14 166.38 32.09 206.53 53.57 178.38 180.67 83.06 167.52 19.06 53.24 156.87 99.02 93.57 57.88 229.49 109.74 71.14 55.78 43.90 67.86 48 E12_Aa NovelBoundary 0 3.78 9.54 29.39 18.65 20.80 41.79 16.12 23.74 14.87 22.54 14.53 6.30 12.66 7.83 18.79 19.31 16.64 43.11 4.80 20.13 3.09 8.45 4.35 49 ER12a ExonRegion 0 28.72 85.77 117.02 169.06 43.11 203.51 61.12 189.52 183.16 102.25 183.88 50.00 26.59 152.04 83.98 107.06 67.72 189.20 65.28 69.49 62.07 41.44 51.21 50 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER13a ExonRegion 0 13.14 42.00 110.27 144.99 28.37 111.81 34.88 168.76 154.76 123.16 128.80 45.27 38.96 94.65 50.99 57.29 51.80 147.84 46.74 77.48 37.92 35.87 41.52 52 E13a_E14a KnownJunction 0 41.64 78.74 193.93 279.52 66.81 337.48 85.28 327.40 236.46 181.10 229.27 90.18 71.26 220.56 122.26 136.12 109.12 361.81 134.22 88.84 52.63 90.44 102.52 53 E14_Aa NovelBoundary 0 10.67 0.00 14.90 7.92 0.00 10.45 1.68 8.42 9.58 12.97 12.69 0.00 0.00 7.89 15.82 32.30 15.99 28.60 9.22 3.26 0.00 6.25 3.93 54 ER14a ExonRegion 0 20.29 80.14 143.22 245.07 56.50 178.05 58.25 298.13 207.02 157.93 252.88 69.46 36.72 158.55 102.13 143.84 83.91 157.90 57.05 93.08 52.31 53.09 59.66 55 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 E15_Aa NovelBoundary 0 14.00 6.18 21.17 42.05 4.24 17.55 24.60 30.15 18.20 14.10 9.84 18.91 20.13 7.06 5.07 7.69 0.00 21.80 0.00 6.52 5.87 3.12 12.63 57 ER15a ExonRegion 0 11.64 40.96 122.30 132.44 18.70 71.83 25.68 191.30 112.40 72.96 123.46 32.43 29.62 81.20 49.80 48.33 28.44 105.02 36.79 27.91 28.61 27.57 22.64 58 E15_Da NovelBoundary 0 24.00 14.08 51.98 136.78 18.85 26.35 25.61 41.48 41.03 23.05 81.92 24.91 13.80 41.03 14.59 33.58 16.36 39.88 44.33 26.97 18.47 17.02 14.85 59 E15a_E16a KnownJunction 0 0.00 76.96 137.84 111.51 31.49 50.65 46.59 193.62 110.10 62.08 105.24 5.40 26.46 45.50 39.31 59.73 38.71 218.83 77.56 0.00 32.80 8.14 24.50 60 E16_Aa NovelBoundary 0 26.89 32.30 126.02 206.97 24.62 48.49 39.44 95.29 35.33 30.84 113.82 11.85 6.82 63.75 22.99 38.02 34.69 88.71 45.18 20.33 22.18 22.72 28.43 61 ER16a ExonRegion 0 16.70 58.12 180.40 210.82 36.49 107.16 41.98 203.31 149.80 93.22 154.40 20.22 19.46 83.21 56.55 82.36 44.67 205.89 67.42 39.47 51.40 31.68 39.29 62 E16a_E17a KnownJunction 1 50.68 77.49 301.41 443.23 67.06 176.55 51.58 306.17 266.03 150.61 226.74 6.30 6.17 105.60 60.33 150.64 76.95 336.06 144.10 78.04 63.69 52.48 61.46 63 ER17a ExonRegion 0 78.94 86.06 259.78 339.71 58.62 186.73 55.59 263.33 250.92 148.00 273.49 43.00 23.13 125.87 89.10 142.32 91.27 256.43 102.99 105.00 84.74 51.16 68.59 64 E17_Da NovelBoundary 0 3.70 0.00 30.78 24.44 0.00 5.05 14.75 21.60 6.45 5.72 16.90 18.46 0.00 26.02 0.00 8.37 0.00 10.45 11.77 5.88 0.00 11.02 0.00 65 E17a_E18a KnownJunction 0 3.33 0.00 8.07 21.74 0.00 7.15 3.80 2.38 17.27 2.36 28.01 24.61 8.28 7.06 0.00 16.24 4.77 7.21 8.85 2.62 0.00 12.37 7.68 66 E17a_E19a KnownJunction 0 30.38 66.17 207.30 324.63 65.20 151.79 64.92 265.26 258.30 143.95 153.51 43.21 41.23 56.45 53.65 99.97 47.41 228.28 63.15 84.12 43.00 44.15 23.82 67 I17 Intron 0 2.94 2.82 14.58 9.16 3.71 7.63 4.13 7.15 3.19 2.96 12.07 2.47 7.85 14.45 14.74 11.34 0.00 9.24 3.32 6.64 2.29 3.61 2.04 68 I17_SR1 SilentIntronRegion 0 3.40 3.03 15.88 10.11 4.37 8.42 4.79 7.74 3.64 3.14 13.50 2.91 9.23 15.76 15.76 12.46 0.00 10.50 3.87 7.54 2.38 4.25 2.40 69 E18_Aa NovelBoundary 0 14.37 2.96 37.05 22.18 11.63 22.66 5.70 23.49 3.53 5.10 11.58 7.65 0.00 25.96 0.00 12.05 12.53 16.87 4.80 8.82 0.00 5.76 0.00 70 ER18a ExonRegion 0 4.10 2.96 28.47 28.58 4.17 11.71 5.43 4.73 10.17 5.88 36.19 9.53 5.60 28.88 17.21 12.60 4.55 17.25 8.32 5.66 5.71 4.97 7.31 71 E18_Da NovelBoundary 0 13.19 6.64 39.15 44.65 3.40 5.62 11.53 5.50 12.38 8.57 10.63 13.05 0.00 22.49 37.70 20.42 14.12 47.92 0.00 3.26 0.00 14.88 3.84 72 E18a_E19a KnownJunction 0 0.00 0.00 1.30 3.23 0.00 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 4.94 0.00 0.00 4.58 3.40 0.00 0.00 3.15 0.00 0.00 73 I18_SR1 SilentIntronRegion 0 2.13 1.35 16.54 10.21 0.90 6.77 3.55 5.19 1.24 3.44 16.86 2.36 9.07 16.35 10.98 7.98 3.32 11.07 5.32 5.00 3.70 5.59 7.88 74 E19_Aa NovelBoundary 0 14.00 0.00 21.67 25.14 0.00 10.45 4.24 11.54 6.22 13.35 28.95 12.60 0.00 12.60 11.99 0.00 4.39 42.41 16.47 5.69 0.00 2.82 7.60 75 ER19a ExonRegion 1 27.72 59.51 159.11 177.19 36.13 115.64 40.17 144.69 123.87 83.73 131.42 14.72 7.90 81.27 66.21 64.03 41.39 134.01 53.06 42.82 41.43 21.98 22.81