Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SPOPL Gene 0 31.68 48.20 27.24 49.85 69.29 68.32 76.47 42.49 41.83 53.27 112.64 184.57 152.75 106.83 57.63 50.81 128.29 18.77 12.21 31.46 11.52 55.71 21.93 2 280098 Transcript 0 17.26 32.92 15.27 26.23 45.27 41.60 53.32 30.23 28.13 35.83 103.17 129.13 122.95 68.87 42.01 37.17 122.08 10.95 11.44 27.02 5.02 36.51 16.76 3 430968 Transcript 0 3.78 17.76 3.55 1.80 3.57 7.61 23.94 4.35 17.33 3.87 29.27 17.71 63.47 60.27 34.86 49.13 16.36 6.30 22.31 10.67 14.15 18.68 0.00 4 420679 Transcript 0 0.74 2.01 0.32 0.86 0.51 6.64 6.93 3.23 2.38 1.91 16.05 7.56 30.50 26.07 8.77 13.70 55.49 4.57 2.58 2.77 4.91 5.41 1.49 5 467775 Transcript 0 1.66 0.82 1.14 2.13 1.53 1.68 4.67 1.04 0.94 0.95 2.19 8.15 9.03 1.00 0.89 1.18 3.54 0.27 1.54 0.59 1.47 2.41 0.82 6 ER1a ExonRegion 0 0.26 1.03 0.79 0.49 0.00 3.83 0.52 0.00 1.01 1.41 16.74 0.00 5.19 14.76 3.43 13.22 21.61 1.71 2.08 1.66 2.75 2.46 4.09 7 E1_Ab KnownBoundary 1 6.74 3.03 3.25 2.03 0.00 16.41 4.50 0.00 7.58 4.06 56.49 0.00 12.01 62.81 0.00 70.32 73.87 16.71 4.52 14.83 19.03 8.21 19.63 8 ER1b ExonRegion 1 3.86 5.54 2.99 4.37 1.46 7.65 7.04 0.24 8.12 9.46 63.64 5.12 18.23 46.93 15.78 33.66 112.44 18.19 11.26 18.25 15.51 11.23 16.30 9 E1_Da NovelBoundary 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 4.69 6.30 0.00 0.00 0.00 43.15 3.83 0.00 0.00 0.00 2.72 0.00 4.35 10 E1a_E2a KnownJunction 1 0.00 2.63 5.97 4.99 0.00 4.88 6.36 3.61 22.83 16.73 126.56 24.91 47.89 121.61 14.09 34.86 168.40 26.94 8.00 24.54 10.56 27.19 32.10 11 I1_SR1 SilentIntronRegion 0 10.71 6.40 5.80 6.60 10.57 2.49 12.76 3.47 1.99 3.92 3.77 23.78 28.23 1.73 7.87 10.18 16.61 1.71 3.23 5.74 0.67 0.82 2.44 12 I1_AR1 ActiveIntronRegion 0 6.89 11.07 5.81 12.86 10.61 5.28 17.03 10.06 4.11 6.26 5.08 25.43 27.48 3.80 10.56 16.03 27.04 1.67 5.78 9.93 0.00 2.33 5.73 13 I1_SR2 SilentIntronRegion 0 13.81 10.88 10.17 11.03 12.76 3.24 11.98 9.69 6.15 7.32 6.10 27.70 26.79 2.60 8.07 10.87 19.94 1.78 3.30 6.71 0.69 0.84 2.39 14 ER2a ExonRegion 0 3.73 15.86 3.22 9.32 23.13 22.96 29.08 11.11 30.05 24.00 127.84 57.07 73.78 113.23 31.77 84.12 182.43 48.07 23.04 39.99 20.70 40.43 26.88 15 E2a_E3a KnownJunction 0 0.00 3.22 2.72 18.88 20.63 25.67 34.40 11.54 38.45 30.62 136.25 119.44 114.44 107.89 43.27 68.27 148.11 26.49 9.22 50.56 15.51 69.19 45.41 16 ER3a ExonRegion 0 10.36 11.22 8.61 15.38 14.85 30.14 49.78 33.58 41.48 35.75 207.77 178.96 213.09 165.01 47.99 84.34 262.91 24.75 13.76 45.27 19.98 70.05 30.83 17 E3a_E4a KnownJunction 0 0.00 15.79 3.67 1.80 9.93 18.06 23.27 28.09 25.23 26.86 133.88 139.25 209.89 120.20 39.80 62.04 152.88 6.84 0.00 12.59 11.68 30.62 29.02 18 E3a_E4b KnownJunction 0 3.78 17.76 3.55 1.80 3.57 7.61 23.94 4.35 17.33 3.87 29.27 17.71 63.47 60.27 34.86 49.13 16.36 6.30 22.31 10.67 14.15 18.68 0.00 19 ER4a ExonRegion 0 11.82 10.03 9.60 17.41 23.12 39.86 44.52 29.94 34.41 34.68 220.62 218.82 219.00 151.11 44.85 81.49 266.73 12.91 12.25 24.53 16.90 62.22 37.52 20 E4_Ab KnownBoundary 0 22.30 16.12 15.58 26.20 43.89 83.76 80.24 30.19 39.96 38.06 265.49 354.42 336.83 209.67 71.08 94.33 332.49 17.78 16.09 17.19 19.40 88.05 40.72 21 ER4b ExonRegion 0 7.96 22.98 8.91 18.72 39.20 46.58 45.76 31.63 35.65 30.45 235.48 284.88 289.73 182.81 51.06 90.43 276.62 23.91 13.06 27.13 21.95 63.10 32.30 22 E4a_E5a KnownJunction 0 6.74 20.13 8.78 18.05 77.16 31.74 25.17 35.94 34.81 24.44 260.12 325.31 342.19 208.96 60.82 81.00 296.49 29.02 12.52 55.03 14.21 53.89 51.82 23 E5_Aa NovelBoundary 0 0.00 3.16 0.00 5.53 7.81 2.33 27.47 6.90 1.24 16.25 30.48 37.21 20.62 14.83 0.00 0.00 8.79 2.11 0.00 5.24 2.59 5.76 0.00 24 ER5a ExonRegion 0 7.30 38.36 9.76 15.65 42.81 31.81 45.61 36.30 39.31 28.24 266.81 312.77 334.29 201.28 59.13 78.81 333.28 28.16 17.24 56.42 20.90 57.05 33.01 25 ER5b ExonRegion 0 13.98 34.24 8.37 14.48 39.22 42.51 71.56 28.67 34.71 40.22 243.04 308.53 301.96 189.19 48.44 76.55 290.71 19.00 16.67 43.24 16.61 66.08 22.66 26 E5b_E6a KnownJunction 1 0.00 0.00 0.00 2.06 0.00 0.00 8.88 4.31 3.04 3.22 16.21 0.00 34.25 14.77 10.63 6.84 69.47 3.32 4.05 2.49 3.15 7.53 0.00 27 E5b_E7a KnownJunction 0 10.52 39.53 9.82 14.25 47.20 37.42 68.45 37.62 35.62 41.29 198.84 199.11 211.84 95.53 56.74 58.02 254.89 18.24 21.18 49.41 5.68 45.50 27.49 28 ER6a ExonRegion 0 2.23 3.40 0.96 0.52 1.54 5.77 5.56 3.06 2.39 1.02 19.45 16.38 29.98 38.78 9.36 14.52 71.46 5.54 3.68 5.81 5.41 6.06 4.48 29 E6a_E7a KnownJunction 0 0.00 2.63 0.00 0.00 0.00 14.14 6.36 2.30 1.71 1.50 12.48 6.30 27.27 24.66 6.30 19.74 25.53 4.85 0.00 0.00 6.18 2.63 0.00 30 ER7a ExonRegion 0 20.76 54.37 14.62 29.13 58.37 49.89 66.47 35.02 37.66 42.72 218.09 311.48 311.86 166.54 52.09 83.97 293.87 26.25 17.09 52.03 19.08 59.81 26.22 31 E7a_E8a KnownJunction 0 37.19 57.36 19.51 32.00 63.24 46.00 79.36 27.48 39.44 31.51 237.64 472.65 451.11 155.40 78.99 144.32 282.28 22.63 21.27 45.76 33.79 53.76 40.21 32 ER8a ExonRegion 1 15.65 44.41 21.16 44.22 50.22 74.86 106.53 22.87 45.46 38.63 235.05 396.61 275.87 213.28 52.43 124.35 283.70 40.98 23.38 51.29 42.70 68.42 43.21 33 E8a_E9a KnownJunction 1 21.11 49.27 17.98 50.14 59.42 111.87 133.77 28.01 35.56 43.46 237.59 492.91 344.62 256.70 60.45 133.04 322.21 44.27 42.26 55.16 41.58 112.85 41.74 34 E9_Aa NovelBoundary 0 14.45 16.25 7.89 5.53 0.00 0.00 30.43 6.16 2.72 2.61 4.74 18.91 0.00 2.18 4.45 6.66 8.60 3.86 0.00 0.00 0.00 3.12 3.41 35 ER9a ExonRegion 0 31.04 73.69 21.93 33.70 66.07 94.64 97.78 27.51 40.85 38.28 236.85 405.39 359.91 234.07 68.99 122.49 307.73 57.19 26.44 52.50 47.55 73.14 51.16 36 E9_Da NovelBoundary 0 13.71 0.00 13.99 1.40 0.00 0.00 10.73 3.70 1.79 2.61 4.47 0.00 6.82 0.00 4.45 10.94 4.77 2.24 0.00 3.26 0.00 0.00 4.35 37 E9a_E10b KnownJunction 0 30.15 80.78 25.61 49.61 55.35 46.79 70.17 12.90 46.18 44.27 173.20 414.29 430.65 227.21 107.05 149.53 277.33 75.15 17.13 53.31 46.83 52.23 78.88 38 ER10a ExonRegion 0 2.43 1.17 2.27 4.05 3.07 3.36 7.55 2.09 1.46 1.91 4.31 12.30 12.46 2.01 1.78 1.11 5.43 0.55 1.11 1.18 0.14 1.46 1.64 39 E10_Ab KnownBoundary 0 0.00 0.00 1.83 1.40 0.00 0.00 4.50 0.00 1.79 1.67 0.00 19.21 6.66 0.00 10.38 4.10 17.20 0.00 13.84 0.00 0.00 0.00 0.00 40 ER10b ExonRegion 0 17.26 58.67 23.98 36.11 35.03 56.64 72.46 33.16 56.15 50.25 263.80 372.27 229.61 243.40 81.81 162.67 400.31 89.51 25.53 63.83 49.20 78.40 63.57 41 E10_Da NovelBoundary 0 0.00 0.00 1.51 1.73 3.90 2.56 8.88 0.00 0.00 0.00 5.26 6.30 21.26 2.41 0.00 0.00 17.86 0.00 14.21 0.00 0.00 0.00 0.00 42 E10a_E11a KnownJunction 1 20.45 61.11 14.49 41.35 89.13 77.57 129.26 32.00 49.39 56.44 214.53 351.86 136.19 283.48 101.37 142.01 436.18 79.42 16.85 59.51 51.15 74.40 44.56 43 ER11a ExonRegion 0 39.63 57.09 21.92 45.00 66.30 108.23 104.18 32.81 59.26 63.14 260.37 301.94 209.14 244.25 101.49 162.75 431.74 62.31 31.32 70.41 50.81 65.63 59.77 44 E11a_E12a KnownJunction 0 21.93 43.87 26.99 47.01 68.68 91.25 63.86 37.79 63.19 67.13 175.20 132.79 150.64 205.60 113.36 138.85 315.47 39.59 18.82 65.07 27.37 73.36 63.77 45 ER11b ExonRegion 0 0.90 0.47 0.00 0.21 0.00 0.00 1.78 0.00 0.43 0.00 0.07 4.00 5.59 0.00 0.00 1.26 1.65 0.00 1.96 0.00 2.80 3.37 0.00 46 I11_AR1 ActiveIntronRegion 0 2.72 5.81 8.58 5.45 8.03 0.52 13.81 6.17 0.00 2.29 3.31 12.99 12.73 3.25 5.39 19.11 24.05 0.00 4.55 2.13 2.20 0.00 2.94 47 ER12a ExonRegion 0 21.60 49.07 20.96 53.77 53.82 62.19 88.18 39.94 64.78 67.84 277.35 261.74 165.93 238.34 77.81 139.08 397.41 75.67 26.23 72.13 48.36 75.82 67.18 48 E12_Da KnownBoundary 0 29.41 46.04 22.80 66.36 54.67 87.00 120.61 42.76 57.29 73.36 217.32 307.75 248.36 256.40 95.56 132.70 248.99 50.41 27.58 70.76 19.83 61.36 78.02 49 ER12b ExonRegion 0 40.99 58.20 35.22 63.97 88.62 83.55 90.99 53.07 47.76 64.80 93.95 188.27 151.82 96.32 65.85 40.28 89.76 12.91 11.06 29.99 6.63 61.57 18.70