Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC012487.1 Gene 0 12.54 12.44 15.88 12.31 8.85 7.91 16.31 14.16 13.05 8.44 4.71 8.41 17.00 12.67 17.51 10.01 12.26 8.01 12.21 12.48 6.61 8.15 18.13 2 397737 Transcript 0 8.21 7.81 8.25 8.06 5.48 6.12 9.46 8.83 5.92 4.40 2.53 4.81 7.54 6.28 8.58 8.04 6.96 6.49 7.15 7.88 3.89 5.04 10.87 3 322353 Transcript 0 2.52 4.35 3.48 0.94 2.55 2.19 5.68 1.84 0.86 1.63 0.92 1.70 4.60 2.50 2.93 1.42 0.79 0.44 0.00 2.54 1.04 0.99 0.00 4 440975 Transcript 0 0.00 0.00 4.88 0.00 3.40 2.44 0.00 0.00 0.00 2.55 2.68 0.00 6.82 21.78 17.18 3.42 17.02 4.56 21.46 5.56 2.66 0.00 3.84 5 ER1a ExonRegion 0 1.59 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.92 0.00 1.60 0.00 0.00 1.22 6 E1_Ac KnownBoundary 0 28.89 0.00 1.83 0.00 0.00 2.90 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 12.06 0.00 3.26 0.00 2.33 8.02 7 ER1b ExonRegion 0 16.18 0.00 0.53 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 1.18 8.84 0.00 2.13 0.00 2.38 7.76 8 ER1c ExonRegion 0 3.27 0.70 5.60 1.35 1.71 1.69 1.54 0.28 0.99 3.78 3.29 1.84 2.51 7.03 11.58 1.25 4.44 7.08 8.90 2.79 2.81 2.56 10.77 9 E1_Da KnownBoundary 0 0.00 3.09 14.31 8.99 0.00 0.00 2.08 4.19 3.18 4.97 0.00 13.80 5.84 10.60 9.64 3.16 4.49 15.88 8.66 3.26 0.00 2.88 29.28 10 E1a_E2a KnownJunction 0 0.00 0.00 4.88 0.00 3.40 2.44 0.00 0.00 0.00 2.55 2.68 0.00 6.82 21.78 17.18 3.42 17.02 4.56 21.46 5.56 2.66 0.00 3.84 11 ER1d ExonRegion 0 3.11 0.31 10.58 4.68 4.53 0.00 2.25 1.86 2.20 2.28 6.64 2.33 2.35 6.22 12.00 3.14 11.87 4.80 3.49 2.45 7.54 6.49 9.29 12 E1b_E2a KnownJunction 0 0.00 0.00 9.93 0.00 4.33 0.00 1.72 0.00 0.00 1.67 7.21 5.55 0.00 2.47 4.45 0.00 0.00 0.00 0.00 5.37 0.00 2.94 3.93 13 E2_Aa NovelBoundary 0 9.19 8.49 25.81 14.05 11.97 5.17 5.70 26.86 17.45 20.60 0.00 0.00 6.82 2.47 5.69 0.00 3.83 2.11 0.00 8.69 0.00 0.00 0.00 14 ER2a ExonRegion 0 5.48 3.04 10.53 6.91 7.96 4.84 5.82 4.50 9.91 4.78 5.57 2.61 11.13 10.06 19.96 10.53 18.65 10.13 18.34 10.87 9.35 12.75 12.67 15 E2_Da KnownBoundary 0 11.34 12.76 18.78 8.16 3.74 2.84 16.61 15.07 25.58 11.36 0.00 0.00 7.63 2.47 9.64 0.00 0.00 10.57 7.62 18.34 3.15 6.00 7.77 16 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2b ExonRegion 0 5.65 9.28 26.56 15.43 6.95 7.43 12.68 19.98 24.77 12.92 1.11 2.39 15.90 10.69 14.00 5.28 6.60 7.28 10.01 15.41 5.23 7.00 14.06 18 E2_Db KnownBoundary 0 7.48 33.22 40.06 27.17 4.33 10.39 24.55 26.41 17.68 8.89 5.16 0.00 6.82 9.65 0.00 7.69 8.79 4.64 8.28 10.87 14.58 8.57 25.27 19 ER2c ExonRegion 0 16.41 16.29 17.64 14.42 10.70 8.81 21.60 17.23 16.28 9.81 5.72 11.96 23.90 16.03 21.40 11.31 15.07 7.31 14.09 14.63 7.44 9.18 22.16 20 E2_Dc NovelBoundary 0 17.63 9.60 41.22 27.44 12.39 7.61 12.63 24.56 30.56 11.44 9.21 5.70 0.00 11.71 10.75 4.36 22.44 17.53 29.37 12.27 9.20 5.76 28.34 21 E2c_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3_Aa NovelBoundary 0 0.00 3.29 42.49 29.43 20.63 28.17 20.18 12.03 22.19 15.42 2.21 0.00 6.82 0.00 0.00 7.18 16.36 13.89 16.47 5.82 2.35 13.96 29.62 23 ER3a ExonRegion 0 14.83 14.97 15.38 17.80 11.21 14.75 16.26 18.09 7.41 7.79 4.39 7.29 6.25 9.09 12.92 20.85 12.77 16.74 14.50 15.32 8.10 10.96 20.08 24 E3_Da NovelBoundary 0 397.40 287.25 158.16 169.54 283.62 235.15 274.52 173.04 123.06 132.99 47.17 41.41 26.62 26.25 80.47 170.38 94.81 85.23 151.72 148.67 72.03 76.24 162.36 25 I3 Intron 0 1.69 2.28 4.38 3.90 0.86 3.52 5.50 3.71 1.77 4.10 1.24 4.56 16.89 7.73 6.03 1.90 3.69 3.08 5.60 0.34 3.52 0.67 7.04 26 I3_SR1 SilentIntronRegion 0 1.70 2.28 4.39 3.91 0.86 3.53 5.52 3.72 1.77 4.11 1.24 4.57 16.95 7.76 6.05 1.91 3.71 3.09 5.62 0.34 3.53 0.67 7.06 27 E4_Aa NovelBoundary 0 174.40 187.66 81.64 165.48 329.46 271.95 155.36 135.13 141.46 90.61 79.02 204.82 153.40 115.66 96.67 127.92 79.01 41.12 59.77 47.62 89.76 115.00 36.19 28 ER4a ExonRegion 0 5.04 8.70 6.95 1.87 5.10 4.37 11.36 3.68 1.72 3.26 1.84 3.40 9.20 5.01 5.86 2.83 1.57 0.88 0.00 5.07 2.08 1.99 0.00