Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSN Gene 0 165.33 244.50 176.54 209.58 208.62 208.12 225.37 176.80 129.79 160.18 285.52 228.32 161.85 231.62 164.31 148.66 174.42 162.57 141.34 165.22 67.70 124.56 75.82 2 455432 Transcript 0 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.64 0.00 3 389682 Transcript 0 0.00 1.52 0.00 0.00 0.80 3.60 2.66 1.03 0.00 0.00 3.10 0.00 0.00 2.26 0.37 0.00 3.33 1.88 0.00 0.85 2.15 0.00 1.18 4 467324 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 483698 Transcript 1 8.65 11.57 32.56 30.81 22.12 25.36 21.09 40.64 29.23 44.09 113.70 14.66 15.32 60.77 23.35 54.42 93.70 74.66 31.08 52.35 51.81 23.45 20.90 6 490717 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 7 478165 Transcript 0 0.00 0.00 3.90 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 8 498545 Transcript 0 0.00 0.00 0.00 1.70 0.00 0.00 0.00 2.55 0.00 0.00 7.16 0.00 0.00 0.00 0.00 0.00 4.49 2.11 0.00 0.00 0.00 0.00 0.00 9 490104 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 495112 Transcript 0 3.63 2.70 1.27 2.03 0.00 2.56 0.00 2.22 0.00 1.13 18.90 0.00 6.17 7.83 0.00 3.25 4.39 2.03 4.61 0.00 0.00 2.82 0.00 11 481818 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 409193 Transcript 0 12.50 10.86 6.26 12.14 16.85 13.12 11.64 7.93 4.96 7.28 5.88 10.51 11.36 16.76 6.31 13.08 9.73 8.41 8.21 5.84 3.05 4.39 4.17 13 413418 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ER1a ExonRegion 0 0.00 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 0.00 0.00 0.00 0.00 1.35 1.28 0.00 15 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 0.00 1.52 0.00 0.00 0.80 3.60 2.66 1.03 0.00 0.00 3.10 0.00 0.00 2.26 0.37 0.00 3.33 1.88 0.00 0.85 2.15 0.00 1.18 17 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 3.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 18 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2_Ad KnownBoundary 0 0.00 0.00 2.96 0.00 7.72 5.17 0.00 2.38 0.00 3.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.37 5.75 2.63 0.00 20 E2_Ae KnownBoundary 0 5.85 0.00 4.67 12.09 3.48 2.33 12.14 6.00 5.87 10.74 4.58 0.00 5.84 4.18 9.64 6.75 3.83 0.00 0.00 2.56 0.00 0.00 0.00 21 ER2b ExonRegion 0 0.00 2.03 0.00 0.00 2.68 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.12 5.80 0.00 3.30 1.85 0.00 0.00 2.20 0.00 0.00 22 ER2c ExonRegion 0 0.00 2.03 0.00 0.00 2.68 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.12 5.80 0.00 3.30 1.85 0.00 0.00 2.20 0.00 0.00 23 ER2d ExonRegion 0 0.10 1.02 1.17 0.50 1.09 5.08 0.42 1.02 0.90 0.78 3.51 0.00 0.00 8.34 6.99 0.14 5.25 2.10 0.00 0.00 2.30 0.66 0.53 24 E2_Af KnownBoundary 0 24.97 73.74 13.99 23.21 52.29 139.47 74.50 36.39 16.20 34.41 79.18 6.30 0.00 40.03 40.67 102.28 64.98 72.67 37.27 46.98 31.01 46.66 60.61 25 ER2e ExonRegion 1 21.99 50.39 13.34 13.86 28.84 110.84 57.96 26.31 12.69 13.25 65.93 3.13 0.00 41.78 33.53 83.71 48.41 69.50 33.80 35.22 24.24 35.54 37.03 26 ER2f ExonRegion 1 41.30 95.91 52.83 52.30 81.72 135.11 100.08 69.08 50.41 72.06 219.59 21.55 13.80 110.81 53.82 126.55 160.21 196.65 97.15 97.54 89.64 57.86 56.30 27 E2_Da KnownBoundary 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 6.16 1.59 10.29 2.68 0.00 0.00 0.00 5.81 3.67 8.98 1.78 4.52 0.00 5.37 0.00 0.00 28 E2a_E4a KnownJunction 1 10.22 6.58 30.28 16.78 8.57 10.51 15.55 38.36 27.17 46.07 94.18 0.00 20.94 25.78 9.15 49.22 95.18 61.39 13.74 48.00 69.50 11.57 3.33 29 E2_Db KnownBoundary 0 0.00 0.00 1.33 3.70 0.00 5.17 1.68 3.74 1.19 4.06 4.58 0.00 0.00 0.00 4.94 0.00 8.51 6.59 0.00 0.00 2.78 2.39 0.00 30 E2b_E4b KnownJunction 1 5.85 21.71 43.43 52.44 50.25 11.07 5.79 70.81 45.40 71.13 191.94 11.85 6.66 71.22 19.90 86.13 144.74 127.39 97.32 93.13 48.50 65.09 73.24 31 E2b_E5a KnownJunction 0 3.63 2.70 1.27 2.03 0.00 2.56 0.00 2.22 0.00 1.13 18.90 0.00 6.17 7.83 0.00 3.25 4.39 2.03 4.61 0.00 0.00 2.82 0.00 32 E2b_E6a NovelJunction 0 0.00 0.00 1.39 0.00 0.00 0.00 1.94 1.68 6.13 2.66 9.90 0.00 0.00 0.00 0.00 0.00 8.32 7.21 0.00 0.00 5.87 3.00 4.35 33 E2b_E7a KnownJunction 0 0.00 0.00 0.00 1.70 0.00 0.00 0.00 2.55 0.00 0.00 7.16 0.00 0.00 0.00 0.00 0.00 4.49 2.11 0.00 0.00 0.00 0.00 0.00 34 ER2g ExonRegion 1 21.17 36.60 72.30 70.87 48.16 41.26 17.21 104.57 59.90 122.15 342.12 28.14 46.90 211.95 46.42 95.11 242.62 185.70 103.52 126.60 127.82 59.38 61.67 35 ER2h ExonRegion 0 10.01 8.15 6.33 7.29 4.24 5.86 3.94 5.41 2.84 14.45 6.73 0.04 4.04 10.59 7.41 8.83 10.73 19.40 11.18 6.42 3.41 4.77 11.80 36 E2c_E4b KnownJunction 0 0.00 5.53 0.00 5.66 3.82 2.38 3.62 0.00 0.00 3.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 4.14 0.00 0.00 0.00 0.00 37 E2c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 38 E2c_E6a KnownJunction 0 0.00 0.00 3.90 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 39 ER3a ExonRegion 0 21.22 19.16 12.52 24.27 17.75 17.56 19.39 12.08 9.91 14.56 11.76 14.71 22.71 24.57 12.62 14.45 14.69 13.26 12.75 11.68 3.64 8.78 8.34 40 E3_Da NovelBoundary 0 126.32 60.65 164.01 154.49 64.77 37.99 59.05 145.11 138.34 117.01 27.11 23.71 19.15 35.73 48.46 108.95 94.90 214.94 105.70 58.48 26.32 28.41 135.39 41 E3a_E4b KnownJunction 0 3.78 2.57 0.00 0.00 15.96 8.69 3.89 3.78 0.00 0.00 0.00 6.30 0.00 8.95 0.00 11.71 4.77 3.56 3.67 0.00 2.47 0.00 0.00 42 ER4a ExonRegion 1 7.76 25.76 58.00 59.06 37.46 31.79 24.27 71.44 52.70 79.90 233.88 23.09 14.07 144.01 57.06 103.03 178.25 160.75 65.83 100.71 85.94 50.70 56.78 43 ER4b ExonRegion 0 67.18 145.19 143.90 153.41 142.22 162.16 108.22 199.52 141.33 174.49 462.52 216.15 128.75 386.96 164.97 393.38 313.30 487.37 234.89 234.52 137.13 178.20 217.41 44 E4_Da KnownBoundary 0 3.04 10.06 12.80 20.31 22.33 14.88 18.64 19.92 20.11 7.06 7.32 42.76 6.49 9.48 9.39 12.30 9.16 11.69 26.45 0.00 0.00 6.12 4.35 45 E4a_E5a KnownJunction 1 77.50 134.32 132.55 143.44 165.87 272.68 147.42 156.49 158.48 173.90 442.69 272.19 147.72 332.51 113.73 316.41 346.52 388.96 205.84 207.92 171.68 136.55 93.05 46 ER4c ExonRegion 0 15.09 8.29 15.87 22.34 31.62 19.35 18.10 19.13 14.69 10.43 20.55 21.02 15.74 14.85 2.79 9.27 10.90 12.72 15.09 19.54 1.19 7.32 3.17 47 E4_Db KnownBoundary 0 13.41 8.81 14.81 25.97 24.87 8.35 12.14 17.13 10.01 6.07 21.74 5.40 6.49 11.83 4.45 15.30 13.84 10.36 4.80 22.37 2.29 10.41 0.00 48 E4_Dc KnownBoundary 0 10.67 0.00 15.17 25.01 24.36 2.90 2.25 18.20 11.63 10.13 7.63 31.96 13.15 31.43 4.70 4.36 4.77 2.57 13.37 9.14 0.00 12.06 0.00 49 E4c_E5a KnownJunction 0 3.70 5.85 10.64 3.10 15.20 2.90 4.20 2.46 0.00 0.00 2.68 0.00 0.00 0.00 0.00 3.59 0.00 2.57 0.00 6.33 0.00 0.00 0.00 50 ER4d ExonRegion 0 13.00 6.97 23.28 29.98 25.61 8.91 10.59 22.47 13.06 10.81 18.50 18.55 14.07 12.53 2.90 14.86 14.15 11.09 6.37 26.75 2.20 12.50 0.00 51 ER4e ExonRegion 0 13.87 6.67 22.06 35.51 30.33 9.27 8.02 23.91 12.76 11.15 13.10 21.17 13.81 25.62 4.35 11.89 12.10 7.90 12.56 13.71 0.24 14.93 0.00 52 ER4f ExonRegion 0 7.98 2.38 9.41 16.61 20.33 33.79 23.47 12.13 7.82 6.29 13.03 20.88 10.94 12.54 3.83 11.02 7.66 1.84 13.66 8.35 0.00 8.08 2.58 53 ER5a ExonRegion 0 123.17 281.64 175.53 189.69 267.05 416.42 324.97 223.56 200.16 226.12 622.59 370.37 253.31 421.90 171.74 282.05 388.18 323.09 246.82 278.22 179.00 178.15 111.29 54 E5a_E6a KnownJunction 0 221.67 508.86 203.30 237.50 309.85 381.31 396.76 286.29 227.14 293.01 607.31 390.13 311.83 473.49 214.72 305.05 510.61 336.23 208.01 266.92 228.27 199.50 121.98 55 ER6a ExonRegion 0 156.35 351.81 228.71 298.19 305.77 344.55 368.06 255.81 217.72 257.60 648.95 460.38 272.47 536.46 217.04 331.90 491.72 362.72 271.17 311.55 219.78 222.02 156.50 56 E6a_E7a KnownJunction 0 228.78 326.52 301.14 368.35 561.46 409.54 358.51 315.20 245.43 312.19 721.66 469.80 264.11 654.60 263.55 365.80 515.47 500.43 391.35 382.86 253.90 235.93 206.32 57 E6a_E8a NovelJunction 1 3.11 0.00 6.53 0.00 0.00 2.56 7.64 9.90 4.48 0.00 0.00 0.00 20.45 12.36 10.14 4.10 0.00 4.52 0.00 2.88 0.00 10.59 3.41 58 ER7a ExonRegion 0 137.89 237.35 260.56 302.07 299.33 297.63 253.88 260.61 212.77 267.83 705.25 422.00 557.14 642.45 257.94 472.34 506.59 582.60 315.11 352.59 229.31 229.74 205.12 59 E7_Da NovelBoundary 1 135.51 263.90 244.73 268.53 191.00 310.45 265.33 239.67 191.03 245.36 548.67 458.10 1022.50 670.91 264.91 582.07 487.24 529.19 253.94 403.83 186.44 203.05 216.40 60 E7b_E8a KnownJunction 0 130.39 280.34 248.31 384.40 144.57 271.43 246.65 294.91 279.05 283.93 524.71 617.30 474.16 644.30 394.46 485.68 345.11 708.11 320.95 401.02 244.21 326.80 241.75 61 ER7b ExonRegion 1 104.49 232.13 236.04 324.06 145.48 249.67 214.24 261.51 236.04 264.00 540.78 566.84 732.17 674.07 352.13 524.75 414.20 585.60 253.30 376.44 210.66 248.56 221.66 62 ER8a ExonRegion 0 124.20 287.12 243.06 324.19 174.33 239.52 239.78 259.02 262.92 302.55 639.97 408.75 274.67 582.31 299.03 332.42 472.65 582.91 326.03 380.62 263.77 211.44 165.11 63 E8_Da KnownBoundary 0 46.16 154.51 153.45 162.62 81.66 123.05 105.46 122.89 100.61 156.50 211.11 138.80 59.74 160.34 70.96 104.16 207.76 297.39 134.69 112.62 103.72 113.47 60.78 64 E8_Db KnownBoundary 1 115.80 181.55 134.59 108.98 72.24 167.23 178.24 85.72 77.31 106.48 263.80 94.53 26.13 121.08 64.16 210.71 201.96 203.20 203.77 147.14 85.44 81.13 137.86 65 ER8b ExonRegion 1 172.14 355.88 263.05 272.58 205.14 279.96 287.30 225.85 222.73 272.96 648.81 396.87 128.19 510.51 236.94 345.76 487.43 583.89 354.64 306.38 262.98 191.68 183.05 66 ER8c ExonRegion 0 168.82 391.00 264.21 291.72 292.00 354.53 362.51 265.99 230.06 290.39 532.47 297.29 199.51 620.72 265.21 431.24 391.92 701.70 325.11 331.51 236.74 198.63 227.43 67 E8_Dc KnownBoundary 0 387.92 754.01 279.68 367.35 527.76 684.61 624.46 389.18 302.51 358.93 578.94 298.60 431.79 783.45 345.88 669.74 502.66 949.45 398.60 541.83 241.18 308.49 317.04 68 ER8d ExonRegion 0 174.33 320.58 198.74 280.87 299.18 344.29 344.17 244.33 231.67 244.45 473.63 283.99 296.77 518.57 269.57 300.36 334.67 333.31 251.76 303.67 130.81 202.94 154.38 69 E8_Dd KnownBoundary 0 150.03 319.68 253.01 329.36 405.94 372.40 472.10 300.33 242.79 251.80 520.66 299.95 349.65 300.49 220.78 196.02 323.98 92.61 166.97 358.13 45.90 182.97 89.72 70 ER8e ExonRegion 0 150.78 241.32 280.18 354.18 290.91 331.60 383.17 274.77 217.09 255.53 490.90 533.05 356.33 338.00 215.31 191.20 273.28 136.97 187.84 250.42 58.54 228.29 94.53 71 E8_De KnownBoundary 0 230.34 328.63 462.88 522.51 336.25 469.50 469.85 332.70 232.03 313.18 646.64 710.03 385.69 332.45 249.71 212.76 316.13 149.98 280.76 324.44 65.18 392.87 102.86 72 ER8f ExonRegion 0 390.92 552.62 356.36 398.36 420.98 370.16 430.71 329.82 213.02 284.29 425.48 376.49 235.19 309.51 311.81 197.89 225.70 192.85 227.40 257.92 81.47 202.75 106.42 73 E8_Df KnownBoundary 0 240.04 306.85 205.49 216.79 153.74 144.52 167.07 230.92 154.14 181.24 187.36 217.72 107.46 118.78 242.66 58.70 62.83 42.20 66.45 159.09 22.55 104.40 21.68 74 ER8g ExonRegion 0 208.45 178.41 165.16 195.12 153.08 101.02 135.14 168.74 105.52 127.37 162.50 213.95 129.77 89.68 154.30 39.62 57.67 41.18 53.21 96.15 12.03 85.64 18.64 75 E8_Dg KnownBoundary 1 101.57 57.75 89.50 128.99 141.94 111.53 83.82 96.85 42.68 60.04 97.97 150.65 19.97 62.81 61.81 15.47 31.51 19.52 26.82 55.74 5.19 44.03 15.71 76 ER8h ExonRegion 0 61.21 37.78 61.49 71.15 63.68 46.94 54.81 59.37 34.46 37.30 52.16 61.51 34.00 34.32 40.88 18.16 24.74 18.55 24.08 37.12 6.54 36.99 10.75