Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC013268.3 Gene 0 1.66 5.92 1.73 4.00 1.05 6.40 0.89 6.17 7.42 7.18 0.26 0.61 0.00 0.25 0.10 0.40 0.20 2.71 0.82 4.67 0.23 0.69 1.06 2 419296 Transcript 0 0.56 1.80 0.20 0.83 0.06 1.08 0.16 1.23 2.47 5.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 6.47 3.85 1.01 1.99 3.12 3 436665 Transcript 0 0.14 0.32 0.98 1.71 0.39 0.62 0.24 3.95 5.07 4.26 0.06 0.00 0.00 0.00 0.00 0.18 0.00 2.71 0.19 0.56 0.00 0.02 0.00 4 336905 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 359870 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.13 4.24 0.12 1.64 0.06 4.73 0.12 0.63 1.51 5.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 2.07 1.66 0.14 1.30 1.01 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 2.55 6.25 15.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.82 9.65 3.03 3.12 8.71 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 7.33 3.16 84.59 33.63 4.33 11.13 2.21 88.02 66.12 109.22 38.75 0.00 0.00 11.77 24.60 53.83 57.04 121.62 55.63 52.16 67.65 45.44 41.83 10 ER2a ExonRegion 0 1.67 5.40 0.59 0.45 0.19 0.80 0.47 1.13 1.17 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.58 1.90 0.00 0.40 0.65 11 E2_Ab KnownBoundary 0 3.70 28.22 27.85 27.64 0.00 2.56 4.15 69.83 50.52 102.48 59.65 0.00 0.00 0.00 17.92 8.37 32.35 90.74 13.65 63.09 42.44 6.06 17.24 12 ER2b ExonRegion 0 2.24 11.93 0.96 4.81 0.51 5.84 0.76 6.52 7.62 15.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.23 1.18 7.64 0.00 0.84 2.84 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 14 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I2 Intron 0 32.45 48.36 18.28 40.02 28.46 60.82 18.23 39.50 51.83 52.94 8.47 2.23 7.77 3.86 9.24 2.79 2.07 17.82 11.96 43.94 4.14 7.17 7.35 16 I2_SR1 SilentIntronRegion 0 32.45 48.36 18.28 40.02 28.46 60.82 18.23 39.50 51.83 52.94 8.47 2.23 7.77 3.86 9.24 2.79 2.07 17.82 11.96 43.94 4.14 7.17 7.35 17 E3_Aa NovelBoundary 0 54.97 88.73 88.70 152.00 70.63 120.73 41.47 142.32 143.75 110.59 7.53 0.00 6.49 5.18 22.25 20.93 17.86 66.86 70.12 165.74 8.34 11.51 25.01 18 ER3a ExonRegion 0 6.84 25.19 15.22 17.77 8.34 58.96 5.96 18.02 35.34 21.92 0.52 1.33 0.00 0.00 0.67 0.00 0.89 19.40 3.19 59.33 4.41 8.73 1.47 19 ER3b ExonRegion 0 4.21 10.08 8.53 9.40 3.74 22.88 4.45 14.78 20.33 14.43 0.53 0.93 0.00 0.00 0.66 0.00 0.91 12.53 0.48 21.50 1.29 2.42 0.70 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.48 4.33 0.87 4.11 0.43 5.43 0.27 5.75 5.19 3.72 0.12 0.43 0.00 0.43 0.17 0.38 0.06 1.03 0.38 1.16 0.13 0.63 1.13 22 E4_Da KnownBoundary 0 45.79 65.71 18.36 71.55 40.58 226.40 15.10 144.38 124.77 85.34 2.53 5.25 6.17 17.31 8.78 25.29 4.30 29.18 12.42 31.38 0.00 28.11 19.29 23 ER4b ExonRegion 0 2.25 3.72 2.58 5.34 2.17 8.54 1.31 9.25 12.13 7.80 0.78 1.74 0.00 0.53 0.07 1.13 0.52 5.24 1.08 4.80 0.39 0.31 0.42 24 E4_Db KnownBoundary 0 12.52 5.99 29.21 32.96 24.53 15.39 8.26 60.58 68.95 45.05 0.00 0.00 8.12 0.00 0.00 0.00 0.00 33.45 9.60 9.52 3.15 0.00 4.35 25 ER4c ExonRegion 0 0.28 0.64 1.96 3.42 0.79 1.24 0.47 7.89 10.15 8.53 0.13 0.00 0.00 0.00 0.00 0.36 0.00 5.42 0.38 1.11 0.00 0.05 0.00